RNA–Protein interactions for RNA: ENST00000470650.1

CCDC93-206, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-206ENST00000470650 AEBP2Q6ZN18 517 aaPredicted RBP28.88■■■□□ 2.21
CCDC93-206ENST00000470650 CHIC1Q5VXU3 224 aa27.82■■■□□ 2.04
CCDC93-206ENST00000470650 PHF23Q9BUL5 403 aaPredicted RBP24.55■■□□□ 1.52
CCDC93-206ENST00000470650 SENP3Q9H4L4 574 aaPredicted RBP24.38■■□□□ 1.49
CCDC93-206ENST00000470650 FOXD1Q16676 465 aa22.79■■□□□ 1.24
CCDC93-206ENST00000470650 PLPPR3Q6T4P5 718 aa22.43■■□□□ 1.18
CCDC93-206ENST00000470650 PPP6R1Q9UPN7 881 aa21.79■■□□□ 1.08
CCDC93-206ENST00000470650 ADRA2BP18089 450 aa21.75■■□□□ 1.07
CCDC93-206ENST00000470650 PIAS4Q8N2W9 510 aaPredicted RBP21.4■■□□□ 1.02
CCDC93-206ENST00000470650 MSH5O43196 834 aa20.97■□□□□ 0.95
CCDC93-206ENST00000470650 MAPK8IP2Q13387 824 aaPredicted RBP19.86■□□□□ 0.77
CCDC93-206ENST00000470650 PPP4R3CPQ6ZMV5 832 aa19.81■□□□□ 0.76
CCDC93-206ENST00000470650 POTEDQ86YR6 584 aa19.71■□□□□ 0.75
CCDC93-206ENST00000470650 SCAF1Q9H7N4 1312 aaKnown RBP19.7■□□□□ 0.74
CCDC93-206ENST00000470650 DMRT2Q9Y5R5 561 aa19.45■□□□□ 0.7
CCDC93-206ENST00000470650 CNKSR2Q8WXI2 1034 aa19.25■□□□□ 0.67
CCDC93-206ENST00000470650 KCNA4P22459 653 aa19.1■□□□□ 0.65
CCDC93-206ENST00000470650 NCBP3Q53F19 620 aaKnown RBP19.1■□□□□ 0.65
CCDC93-206ENST00000470650 NPM3O75607 178 aaKnown RBP18.94■□□□□ 0.62
CCDC93-206ENST00000470650 HOXD11P31277 338 aaPredicted RBP18.93■□□□□ 0.62
CCDC93-206ENST00000470650 RNF216Q9NWF9 866 aaPredicted RBP18.93■□□□□ 0.62
CCDC93-206ENST00000470650 DCAF8L1A6NGE4 600 aa18.75■□□□□ 0.59
CCDC93-206ENST00000470650 DNAJC5BQ9UF47 199 aa18.21■□□□□ 0.51
CCDC93-206ENST00000470650 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.09■□□□□ 0.493e-7■□□□□ 8.8
CCDC93-206ENST00000470650 SLC4A1APQ9BWU0 796 aaKnown RBP18.08■□□□□ 0.48
CCDC93-206ENST00000470650 RNF39Q9H2S5 420 aa18.01■□□□□ 0.47
CCDC93-206ENST00000470650 SLC4A2P04920 1241 aa17.98■□□□□ 0.47
CCDC93-206ENST00000470650 U3KPZ7 1027 aaPredicted RBP17.8■□□□□ 0.44
CCDC93-206ENST00000470650 CACNB1Q02641 598 aaPredicted RBP17.78■□□□□ 0.44
CCDC93-206ENST00000470650 C1QBPQ07021 282 aaKnown RBP17.71■□□□□ 0.43
CCDC93-206ENST00000470650 ZBTB22O15209 634 aa17.6■□□□□ 0.41
CCDC93-206ENST00000470650 FOXD4L1Q9NU39 408 aa17.55■□□□□ 0.4
CCDC93-206ENST00000470650 SPINK5Q9NQ38 1064 aaPredicted RBP17.44■□□□□ 0.38
CCDC93-206ENST00000470650 MYCNP04198 464 aaPredicted RBP17.42■□□□□ 0.38
CCDC93-206ENST00000470650 EHMT2Q96KQ7 1210 aa17.37■□□□□ 0.37
CCDC93-206ENST00000470650 CAPN15O75808 1086 aa17.34■□□□□ 0.37
CCDC93-206ENST00000470650 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.31■□□□□ 0.36
CCDC93-206ENST00000470650 HNRNPUL2Q1KMD3 747 aaKnown RBP17.31■□□□□ 0.36
CCDC93-206ENST00000470650 SAMD1Q6SPF0 538 aaPredicted RBP17.27■□□□□ 0.36
CCDC93-206ENST00000470650 CSRNP3Q8WYN3 585 aa17.24■□□□□ 0.35
CCDC93-206ENST00000470650 TRHP20396 242 aaPredicted RBP17.22■□□□□ 0.35
CCDC93-206ENST00000470650 APLP2Q06481 763 aa17.16■□□□□ 0.34
CCDC93-206ENST00000470650 ATF5Q9Y2D1 282 aaPredicted RBP17.16■□□□□ 0.34
CCDC93-206ENST00000470650 DSG3P32926 999 aa17.08■□□□□ 0.32
CCDC93-206ENST00000470650 ABCB7O75027 752 aa17.05■□□□□ 0.32
CCDC93-206ENST00000470650 ZNF219Q9P2Y4 722 aaPredicted RBP17.05■□□□□ 0.32
CCDC93-206ENST00000470650 ATXN8OSP0DMR3 200 aa16.87■□□□□ 0.29
CCDC93-206ENST00000470650 POLA2Q14181 598 aa16.85■□□□□ 0.29
CCDC93-206ENST00000470650 ZBTB12Q9Y330 459 aaPredicted RBP16.37■□□□□ 0.21
CCDC93-206ENST00000470650 MKRN4PQ13434 485 aaPredicted RBP16.34■□□□□ 0.21
CCDC93-206ENST00000470650 OSCARQ8IYS5 282 aa16.3■□□□□ 0.2
CCDC93-206ENST00000470650 FBLN2P98095 1184 aa16.28■□□□□ 0.2
CCDC93-206ENST00000470650 RBM42Q9BTD8 480 aaKnown RBP16.16■□□□□ 0.18
CCDC93-206ENST00000470650 SPDYE2BA6NHP3 402 aa15.97■□□□□ 0.15
CCDC93-206ENST00000470650 SPDYE6P0CI01 402 aa15.97■□□□□ 0.15
CCDC93-206ENST00000470650 SPDYE2Q495Y8 402 aa15.97■□□□□ 0.15
CCDC93-206ENST00000470650 ZNF692Q9BU19 519 aaPredicted RBP15.96■□□□□ 0.15
CCDC93-206ENST00000470650 AKT1S1Q96B36 256 aa15.95■□□□□ 0.14
CCDC93-206ENST00000470650 REM2Q8IYK8 340 aaPredicted RBP15.87■□□□□ 0.13
CCDC93-206ENST00000470650 SSUH2Q9Y2M2 353 aa15.84■□□□□ 0.13
CCDC93-206ENST00000470650 SPDYE4A6NLX3 237 aa15.8■□□□□ 0.12
CCDC93-206ENST00000470650 PABPN1Q86U42 306 aaKnown RBP eCLIP15.75■□□□□ 0.11
CCDC93-206ENST00000470650 PITPNM1O00562 1244 aa15.72■□□□□ 0.11
CCDC93-206ENST00000470650 CHRDL2Q6WN34 429 aa15.69■□□□□ 0.1
CCDC93-206ENST00000470650 CLEC11AQ9Y240 323 aa15.65■□□□□ 0.1
CCDC93-206ENST00000470650 FKBP8Q14318 412 aa15.61■□□□□ 0.09
CCDC93-206ENST00000470650 SPDYE1Q8NFV5 336 aaPredicted RBP15.57■□□□□ 0.08
CCDC93-206ENST00000470650 POTEHQ6S545 545 aa15.53■□□□□ 0.08
CCDC93-206ENST00000470650 PIP4P2Q8N4L2 257 aa15.47■□□□□ 0.07
CCDC93-206ENST00000470650 FXR2P51116 673 aaKnown RBP eCLIP15.43■□□□□ 0.06
CCDC93-206ENST00000470650 PROM2Q8N271 834 aa15.42■□□□□ 0.06
CCDC93-206ENST00000470650 PRR29P0C7W0 189 aa15.41■□□□□ 0.06
CCDC93-206ENST00000470650 CHADLQ6NUI6 762 aa15.34■□□□□ 0.05
CCDC93-206ENST00000470650 PRKAR2AP13861 404 aaKnown RBP15.32■□□□□ 0.04
CCDC93-206ENST00000470650 STAG3Q9UJ98 1225 aa15.3■□□□□ 0.04
CCDC93-206ENST00000470650 CREBZFQ9NS37 354 aa15.17■□□□□ 0.02
CCDC93-206ENST00000470650 HAX1O00165 279 aa15.07■□□□□ 0
CCDC93-206ENST00000470650 FARP1Q9Y4F1 1045 aaPredicted RBP15.06■□□□□ 0
CCDC93-206ENST00000470650 MIER1Q8N108 512 aa15.03■□□□□ -0
CCDC93-206ENST00000470650 EVX2Q03828 476 aa15.01□□□□□ -0.01
CCDC93-206ENST00000470650 MNX1P50219 401 aaPredicted RBP14.97□□□□□ -0.01
CCDC93-206ENST00000470650 FBXO3Q9UK99 471 aa14.97□□□□□ -0.01
CCDC93-206ENST00000470650 PLCD3Q8N3E9 789 aa14.96□□□□□ -0.01
CCDC93-206ENST00000470650 C19orf67A6NJJ6 358 aa14.91□□□□□ -0.02
CCDC93-206ENST00000470650 VASPP50552 380 aaPredicted RBP14.86□□□□□ -0.03
CCDC93-206ENST00000470650 CD44P16070 742 aaKnown RBP14.85□□□□□ -0.03
CCDC93-206ENST00000470650 PLEKHG5O94827 1062 aa14.84□□□□□ -0.03
CCDC93-206ENST00000470650 NPM1P06748 294 aaKnown RBP eCLIP14.82□□□□□ -0.04
CCDC93-206ENST00000470650 SP7Q8TDD2 431 aaPredicted RBP14.78□□□□□ -0.04
CCDC93-206ENST00000470650 ZRANB1Q9UGI0 708 aa14.74□□□□□ -0.05
CCDC93-206ENST00000470650 KLHL34Q8N239 644 aa14.72□□□□□ -0.05
CCDC93-206ENST00000470650 TSPYL2Q9H2G4 693 aaPredicted RBP14.71□□□□□ -0.05
CCDC93-206ENST00000470650 IFNLR1Q8IU57 520 aaPredicted RBP14.7□□□□□ -0.06
CCDC93-206ENST00000470650 RASEFQ8IZ41 740 aa14.7□□□□□ -0.06
CCDC93-206ENST00000470650 ZBTB47Q9UFB7 747 aaPredicted RBP14.67□□□□□ -0.06
CCDC93-206ENST00000470650 NUBP1P53384 320 aa14.66□□□□□ -0.06
CCDC93-206ENST00000470650 PAK3O75914 559 aaPredicted RBP14.63□□□□□ -0.07
CCDC93-206ENST00000470650 PHF12Q96QT6 1004 aa14.63□□□□□ -0.07
CCDC93-206ENST00000470650 GABBR2O75899 941 aa14.61□□□□□ -0.07
CCDC93-206ENST00000470650 ZNF579Q8NAF0 562 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms