RNA–Protein interactions for RNA: ENST00000470638.3

PRIM2-204, Transcript of DNA primase subunit 2, humanhuman

TSL 5

Gene PRIM2, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2-204ENST00000470638 AEBP2Q6ZN18 517 aaPredicted RBP25.69■■□□□ 1.7
PRIM2-204ENST00000470638 CHIC1Q5VXU3 224 aa25.24■■□□□ 1.63
PRIM2-204ENST00000470638 PHF23Q9BUL5 403 aaPredicted RBP22.17■■□□□ 1.14
PRIM2-204ENST00000470638 SENP3Q9H4L4 574 aaPredicted RBP21.84■■□□□ 1.09
PRIM2-204ENST00000470638 PLPPR3Q6T4P5 718 aa20.6■□□□□ 0.89
PRIM2-204ENST00000470638 FOXD1Q16676 465 aa20.22■□□□□ 0.83
PRIM2-204ENST00000470638 ADRA2BP18089 450 aa19.59■□□□□ 0.73
PRIM2-204ENST00000470638 PPP6R1Q9UPN7 881 aa19.53■□□□□ 0.72
PRIM2-204ENST00000470638 PIAS4Q8N2W9 510 aaPredicted RBP19.2■□□□□ 0.66
PRIM2-204ENST00000470638 MSH5O43196 834 aa18.64■□□□□ 0.57
PRIM2-204ENST00000470638 PPP4R3CPQ6ZMV5 832 aa18.16■□□□□ 0.5
PRIM2-204ENST00000470638 SCAF1Q9H7N4 1312 aaKnown RBP17.94■□□□□ 0.46
PRIM2-204ENST00000470638 POTEDQ86YR6 584 aa17.91■□□□□ 0.46
PRIM2-204ENST00000470638 KCNA4P22459 653 aa17.9■□□□□ 0.46
PRIM2-204ENST00000470638 NCBP3Q53F19 620 aaKnown RBP17.76■□□□□ 0.43
PRIM2-204ENST00000470638 MAPK8IP2Q13387 824 aaPredicted RBP17.72■□□□□ 0.43
PRIM2-204ENST00000470638 CNKSR2Q8WXI2 1034 aa17.61■□□□□ 0.41
PRIM2-204ENST00000470638 NPM3O75607 178 aaKnown RBP17.45■□□□□ 0.38
PRIM2-204ENST00000470638 DMRT2Q9Y5R5 561 aa17.41■□□□□ 0.38
PRIM2-204ENST00000470638 RNF216Q9NWF9 866 aaPredicted RBP17.21■□□□□ 0.35
PRIM2-204ENST00000470638 SLC4A1APQ9BWU0 796 aaKnown RBP17.11■□□□□ 0.33
PRIM2-204ENST00000470638 HOXD11P31277 338 aaPredicted RBP17.07■□□□□ 0.32
PRIM2-204ENST00000470638 DCAF8L1A6NGE4 600 aa16.87■□□□□ 0.29
PRIM2-204ENST00000470638 EHMT2Q96KQ7 1210 aa16.87■□□□□ 0.29
PRIM2-204ENST00000470638 DNAJC5BQ9UF47 199 aa16.72■□□□□ 0.27
PRIM2-204ENST00000470638 FOXD4L1Q9NU39 408 aa16.46■□□□□ 0.23
PRIM2-204ENST00000470638 CSRNP3Q8WYN3 585 aa16.44■□□□□ 0.22
PRIM2-204ENST00000470638 ZBTB22O15209 634 aa16.43■□□□□ 0.22
PRIM2-204ENST00000470638 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.43■□□□□ 0.22
PRIM2-204ENST00000470638 SLC4A2P04920 1241 aa16.4■□□□□ 0.22
PRIM2-204ENST00000470638 MYCNP04198 464 aaPredicted RBP16.15■□□□□ 0.18
PRIM2-204ENST00000470638 U3KPZ7 1027 aaPredicted RBP16.08■□□□□ 0.16
PRIM2-204ENST00000470638 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.96■□□□□ 0.15
PRIM2-204ENST00000470638 HNRNPUL2Q1KMD3 747 aaKnown RBP15.96■□□□□ 0.15
PRIM2-204ENST00000470638 RNF39Q9H2S5 420 aa15.93■□□□□ 0.14
PRIM2-204ENST00000470638 SAMD1Q6SPF0 538 aaPredicted RBP15.91■□□□□ 0.14
PRIM2-204ENST00000470638 APLP2Q06481 763 aa15.8■□□□□ 0.12
PRIM2-204ENST00000470638 ATXN8OSP0DMR3 200 aa15.78■□□□□ 0.12
PRIM2-204ENST00000470638 C1QBPQ07021 282 aaKnown RBP15.76■□□□□ 0.11
PRIM2-204ENST00000470638 ATF5Q9Y2D1 282 aaPredicted RBP15.68■□□□□ 0.1
PRIM2-204ENST00000470638 CAPN15O75808 1086 aa15.65■□□□□ 0.1
PRIM2-204ENST00000470638 SPINK5Q9NQ38 1064 aaPredicted RBP15.62■□□□□ 0.09
PRIM2-204ENST00000470638 TRHP20396 242 aaPredicted RBP15.6■□□□□ 0.09
PRIM2-204ENST00000470638 CACNB1Q02641 598 aaPredicted RBP15.54■□□□□ 0.08
PRIM2-204ENST00000470638 ZNF219Q9P2Y4 722 aaPredicted RBP15.54■□□□□ 0.08
PRIM2-204ENST00000470638 ABCB7O75027 752 aa15.36■□□□□ 0.05
PRIM2-204ENST00000470638 POLA2Q14181 598 aa15.29■□□□□ 0.04
PRIM2-204ENST00000470638 DSG3P32926 999 aa15.22■□□□□ 0.03
PRIM2-204ENST00000470638 FBLN2P98095 1184 aa15.11■□□□□ 0.01
PRIM2-204ENST00000470638 ZBTB12Q9Y330 459 aaPredicted RBP15.06■□□□□ 0
PRIM2-204ENST00000470638 MKRN4PQ13434 485 aaPredicted RBP14.98□□□□□ -0.01
PRIM2-204ENST00000470638 FKBP8Q14318 412 aa14.97□□□□□ -0.01
PRIM2-204ENST00000470638 OSCARQ8IYS5 282 aa14.83□□□□□ -0.04
PRIM2-204ENST00000470638 SPDYE4A6NLX3 237 aa14.79□□□□□ -0.04
PRIM2-204ENST00000470638 ZNF692Q9BU19 519 aaPredicted RBP14.66□□□□□ -0.06
PRIM2-204ENST00000470638 SPDYE2BA6NHP3 402 aa14.64□□□□□ -0.07
PRIM2-204ENST00000470638 SPDYE6P0CI01 402 aa14.64□□□□□ -0.07
PRIM2-204ENST00000470638 SPDYE2Q495Y8 402 aa14.64□□□□□ -0.07
PRIM2-204ENST00000470638 RBM42Q9BTD8 480 aaKnown RBP14.56□□□□□ -0.08
PRIM2-204ENST00000470638 SSUH2Q9Y2M2 353 aa14.5□□□□□ -0.09
PRIM2-204ENST00000470638 PABPN1Q86U42 306 aaKnown RBP eCLIP14.46□□□□□ -0.09
PRIM2-204ENST00000470638 PROM2Q8N271 834 aa14.41□□□□□ -0.1
PRIM2-204ENST00000470638 AKT1S1Q96B36 256 aa14.37□□□□□ -0.11
PRIM2-204ENST00000470638 FBXO3Q9UK99 471 aa14.36□□□□□ -0.11
PRIM2-204ENST00000470638 REM2Q8IYK8 340 aaPredicted RBP14.23□□□□□ -0.13
PRIM2-204ENST00000470638 CLEC11AQ9Y240 323 aa14.23□□□□□ -0.13
PRIM2-204ENST00000470638 SPDYE1Q8NFV5 336 aaPredicted RBP14.22□□□□□ -0.13
PRIM2-204ENST00000470638 STAG3Q9UJ98 1225 aa14.22□□□□□ -0.13
PRIM2-204ENST00000470638 VASPP50552 380 aaPredicted RBP14.16□□□□□ -0.14
PRIM2-204ENST00000470638 PITPNM1O00562 1244 aa14.1□□□□□ -0.15
PRIM2-204ENST00000470638 PLCD3Q8N3E9 789 aa14.08□□□□□ -0.16
PRIM2-204ENST00000470638 PRR29P0C7W0 189 aa14.06□□□□□ -0.16
PRIM2-204ENST00000470638 MIER1Q8N108 512 aa14.04□□□□□ -0.16
PRIM2-204ENST00000470638 PLEKHG5O94827 1062 aa14.02□□□□□ -0.17
PRIM2-204ENST00000470638 KLHL34Q8N239 644 aa13.98□□□□□ -0.17
PRIM2-204ENST00000470638 IFNLR1Q8IU57 520 aaPredicted RBP13.93□□□□□ -0.18
PRIM2-204ENST00000470638 CHRDL2Q6WN34 429 aa13.89□□□□□ -0.19
PRIM2-204ENST00000470638 ZBTB47Q9UFB7 747 aaPredicted RBP13.86□□□□□ -0.19
PRIM2-204ENST00000470638 AMER1Q5JTC6 1135 aaPredicted RBP13.84□□□□□ -0.19
PRIM2-204ENST00000470638 CREBZFQ9NS37 354 aa13.84□□□□□ -0.19
PRIM2-204ENST00000470638 CHADLQ6NUI6 762 aa13.83□□□□□ -0.2
PRIM2-204ENST00000470638 POTEHQ6S545 545 aa13.82□□□□□ -0.2
PRIM2-204ENST00000470638 SPOCK2Q92563 424 aa13.8□□□□□ -0.2
PRIM2-204ENST00000470638 RTN4Q9NQC3 1192 aaKnown RBP13.79□□□□□ -0.2
PRIM2-204ENST00000470638 PRKAR2AP13861 404 aaKnown RBP13.78□□□□□ -0.2
PRIM2-204ENST00000470638 FXR2P51116 673 aaKnown RBP eCLIP13.74□□□□□ -0.21
PRIM2-204ENST00000470638 PIP4P2Q8N4L2 257 aa13.73□□□□□ -0.21
PRIM2-204ENST00000470638 NPM1P06748 294 aaKnown RBP eCLIP13.68□□□□□ -0.22
PRIM2-204ENST00000470638 CIZ1Q9ULV3 898 aaPredicted RBP13.65□□□□□ -0.22
PRIM2-204ENST00000470638 FARP1Q9Y4F1 1045 aaPredicted RBP13.65□□□□□ -0.22
PRIM2-204ENST00000470638 MNX1P50219 401 aaPredicted RBP13.64□□□□□ -0.23
PRIM2-204ENST00000470638 NUBP1P53384 320 aa13.57□□□□□ -0.24
PRIM2-204ENST00000470638 DCAF8Q5TAQ9 597 aa13.57□□□□□ -0.24
PRIM2-204ENST00000470638 FAM212AQ96EL1 285 aa13.57□□□□□ -0.24
PRIM2-204ENST00000470638 RASEFQ8IZ41 740 aa13.53□□□□□ -0.24
PRIM2-204ENST00000470638 GSE1Q14687 1217 aa13.52□□□□□ -0.25
PRIM2-204ENST00000470638 TSPYL2Q9H2G4 693 aaPredicted RBP13.51□□□□□ -0.25
PRIM2-204ENST00000470638 ECM2O94769 699 aaPredicted RBP13.5□□□□□ -0.25
PRIM2-204ENST00000470638 PKD2Q13563 968 aa13.5□□□□□ -0.25
PRIM2-204ENST00000470638 DCAF8L2P0C7V8 631 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms