RNA–Protein interactions for RNA: ENST00000470571.1

SKIL-206, Transcript of SKI like proto-oncogene, humanhuman

TSL 3

Gene SKIL, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIL-206ENST00000470571 AEBP2Q6ZN18 517 aaPredicted RBP27.33■■□□□ 1.97
SKIL-206ENST00000470571 CHIC1Q5VXU3 224 aa25.8■■□□□ 1.72
SKIL-206ENST00000470571 SENP3Q9H4L4 574 aaPredicted RBP23.34■■□□□ 1.33
SKIL-206ENST00000470571 PHF23Q9BUL5 403 aaPredicted RBP23.02■■□□□ 1.28
SKIL-206ENST00000470571 FOXD1Q16676 465 aa21.78■■□□□ 1.08
SKIL-206ENST00000470571 PLPPR3Q6T4P5 718 aa20.56■□□□□ 0.88
SKIL-206ENST00000470571 MSH5O43196 834 aa20.43■□□□□ 0.86
SKIL-206ENST00000470571 PIAS4Q8N2W9 510 aaPredicted RBP20.32■□□□□ 0.84
SKIL-206ENST00000470571 PPP6R1Q9UPN7 881 aa20.25■□□□□ 0.83
SKIL-206ENST00000470571 POTEDQ86YR6 584 aa20.2■□□□□ 0.82
SKIL-206ENST00000470571 ADRA2BP18089 450 aa20.19■□□□□ 0.82
SKIL-206ENST00000470571 MAPK8IP2Q13387 824 aaPredicted RBP18.59■□□□□ 0.57
SKIL-206ENST00000470571 DMRT2Q9Y5R5 561 aa18.48■□□□□ 0.55
SKIL-206ENST00000470571 SCAF1Q9H7N4 1312 aaKnown RBP18.47■□□□□ 0.55
SKIL-206ENST00000470571 PPP4R3CPQ6ZMV5 832 aa18■□□□□ 0.47
SKIL-206ENST00000470571 DCAF8L1A6NGE4 600 aa17.78■□□□□ 0.44
SKIL-206ENST00000470571 HOXD11P31277 338 aaPredicted RBP17.73■□□□□ 0.43
SKIL-206ENST00000470571 CNKSR2Q8WXI2 1034 aa17.7■□□□□ 0.42
SKIL-206ENST00000470571 CACNB1Q02641 598 aaPredicted RBP17.64■□□□□ 0.41
SKIL-206ENST00000470571 RNF216Q9NWF9 866 aaPredicted RBP17.57■□□□□ 0.4
SKIL-206ENST00000470571 RNF39Q9H2S5 420 aa17.42■□□□□ 0.38
SKIL-206ENST00000470571 NCBP3Q53F19 620 aaKnown RBP17.28■□□□□ 0.36
SKIL-206ENST00000470571 C1QBPQ07021 282 aaKnown RBP17.16■□□□□ 0.34
SKIL-206ENST00000470571 DNAJC5BQ9UF47 199 aa17.14■□□□□ 0.33
SKIL-206ENST00000470571 NPM3O75607 178 aaKnown RBP17.02■□□□□ 0.32
SKIL-206ENST00000470571 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.93■□□□□ 0.3
SKIL-206ENST00000470571 KCNA4P22459 653 aa16.57■□□□□ 0.24
SKIL-206ENST00000470571 U3KPZ7 1027 aaPredicted RBP16.54■□□□□ 0.24
SKIL-206ENST00000470571 SPINK5Q9NQ38 1064 aaPredicted RBP16.36■□□□□ 0.21
SKIL-206ENST00000470571 CAPN15O75808 1086 aa16.35■□□□□ 0.21
SKIL-206ENST00000470571 SLC4A2P04920 1241 aa16.29■□□□□ 0.2
SKIL-206ENST00000470571 DSG3P32926 999 aa16.27■□□□□ 0.2
SKIL-206ENST00000470571 APLP2Q06481 763 aa16.07■□□□□ 0.16
SKIL-206ENST00000470571 TRHP20396 242 aaPredicted RBP16.05■□□□□ 0.16
SKIL-206ENST00000470571 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.02■□□□□ 0.16
SKIL-206ENST00000470571 HNRNPUL2Q1KMD3 747 aaKnown RBP16.02■□□□□ 0.16
SKIL-206ENST00000470571 ZNF219Q9P2Y4 722 aaPredicted RBP16■□□□□ 0.15
SKIL-206ENST00000470571 ABCB7O75027 752 aa15.96■□□□□ 0.15
SKIL-206ENST00000470571 SAMD1Q6SPF0 538 aaPredicted RBP15.92■□□□□ 0.14
SKIL-206ENST00000470571 POTEHQ6S545 545 aa15.81■□□□□ 0.12
SKIL-206ENST00000470571 MYCNP04198 464 aaPredicted RBP15.74■□□□□ 0.11
SKIL-206ENST00000470571 SLC4A1APQ9BWU0 796 aaKnown RBP15.62■□□□□ 0.09
SKIL-206ENST00000470571 POLA2Q14181 598 aa15.58■□□□□ 0.08
SKIL-206ENST00000470571 RBM42Q9BTD8 480 aaKnown RBP15.53■□□□□ 0.08
SKIL-206ENST00000470571 FOXD4L1Q9NU39 408 aa15.49■□□□□ 0.07
SKIL-206ENST00000470571 ATF5Q9Y2D1 282 aaPredicted RBP15.4■□□□□ 0.06
SKIL-206ENST00000470571 CHRDL2Q6WN34 429 aa15.25■□□□□ 0.03
SKIL-206ENST00000470571 ZBTB12Q9Y330 459 aaPredicted RBP15.25■□□□□ 0.03
SKIL-206ENST00000470571 ZBTB22O15209 634 aa15.22■□□□□ 0.03
SKIL-206ENST00000470571 AKT1S1Q96B36 256 aa15.14■□□□□ 0.01
SKIL-206ENST00000470571 OSCARQ8IYS5 282 aa15.09■□□□□ 0.01
SKIL-206ENST00000470571 ATXN8OSP0DMR3 200 aa15.04■□□□□ -0
SKIL-206ENST00000470571 REM2Q8IYK8 340 aaPredicted RBP15□□□□□ -0.01
SKIL-206ENST00000470571 PIP4P2Q8N4L2 257 aa14.86□□□□□ -0.03
SKIL-206ENST00000470571 PITPNM1O00562 1244 aa14.85□□□□□ -0.03
SKIL-206ENST00000470571 FBLN2P98095 1184 aa14.82□□□□□ -0.04
SKIL-206ENST00000470571 SPDYE2BA6NHP3 402 aa14.76□□□□□ -0.05
SKIL-206ENST00000470571 SPDYE6P0CI01 402 aa14.76□□□□□ -0.05
SKIL-206ENST00000470571 SPDYE2Q495Y8 402 aa14.76□□□□□ -0.05
SKIL-206ENST00000470571 SP7Q8TDD2 431 aaPredicted RBP14.74□□□□□ -0.05
SKIL-206ENST00000470571 FXR2P51116 673 aaKnown RBP eCLIP14.73□□□□□ -0.05
SKIL-206ENST00000470571 MKRN4PQ13434 485 aaPredicted RBP14.68□□□□□ -0.06
SKIL-206ENST00000470571 HAX1O00165 279 aa14.65□□□□□ -0.06
SKIL-206ENST00000470571 ZNF692Q9BU19 519 aaPredicted RBP14.58□□□□□ -0.08
SKIL-206ENST00000470571 SPDYE1Q8NFV5 336 aaPredicted RBP14.54□□□□□ -0.08
SKIL-206ENST00000470571 CLEC11AQ9Y240 323 aa14.54□□□□□ -0.08
SKIL-206ENST00000470571 SSUH2Q9Y2M2 353 aa14.53□□□□□ -0.08
SKIL-206ENST00000470571 PRKAR2AP13861 404 aaKnown RBP14.47□□□□□ -0.09
SKIL-206ENST00000470571 EVX2Q03828 476 aa14.44□□□□□ -0.1
SKIL-206ENST00000470571 CSRNP3Q8WYN3 585 aa14.39□□□□□ -0.11
SKIL-206ENST00000470571 PABPN1Q86U42 306 aaKnown RBP eCLIP14.35□□□□□ -0.11
SKIL-206ENST00000470571 CHADLQ6NUI6 762 aa14.28□□□□□ -0.12
SKIL-206ENST00000470571 C19orf67A6NJJ6 358 aa14.27□□□□□ -0.13
SKIL-206ENST00000470571 PRR29P0C7W0 189 aa14.27□□□□□ -0.13
SKIL-206ENST00000470571 EHMT2Q96KQ7 1210 aa14.15□□□□□ -0.14
SKIL-206ENST00000470571 GABBR2O75899 941 aa14.11□□□□□ -0.15
SKIL-206ENST00000470571 FARP1Q9Y4F1 1045 aaPredicted RBP14.04□□□□□ -0.16
SKIL-206ENST00000470571 CD44P16070 742 aaKnown RBP14□□□□□ -0.17
SKIL-206ENST00000470571 SPDYE4A6NLX3 237 aa13.92□□□□□ -0.18
SKIL-206ENST00000470571 STAG3Q9UJ98 1225 aa13.92□□□□□ -0.18
SKIL-206ENST00000470571 CREBZFQ9NS37 354 aa13.87□□□□□ -0.19
SKIL-206ENST00000470571 LHX8Q68G74 356 aa13.83□□□□□ -0.2
SKIL-206ENST00000470571 CLCN6P51797 869 aa13.82□□□□□ -0.2
SKIL-206ENST00000470571 POTEIP0CG38 1075 aa13.8□□□□□ -0.2
SKIL-206ENST00000470571 ZRANB1Q9UGI0 708 aa13.78□□□□□ -0.2
SKIL-206ENST00000470571 ZNF579Q8NAF0 562 aaKnown RBP13.76□□□□□ -0.21
SKIL-206ENST00000470571 DCBLD2Q96PD2 775 aa13.71□□□□□ -0.21
SKIL-206ENST00000470571 PAK3O75914 559 aaPredicted RBP13.64□□□□□ -0.23
SKIL-206ENST00000470571 GALR2O43603 387 aaPredicted RBP13.62□□□□□ -0.23
SKIL-206ENST00000470571 NPM1P06748 294 aaKnown RBP eCLIP13.62□□□□□ -0.23
SKIL-206ENST00000470571 MNX1P50219 401 aaPredicted RBP13.61□□□□□ -0.23
SKIL-206ENST00000470571 PHF12Q96QT6 1004 aa13.57□□□□□ -0.24
SKIL-206ENST00000470571 PROM2Q8N271 834 aa13.54□□□□□ -0.24
SKIL-206ENST00000470571 MS4A3Q96HJ5 214 aa13.38□□□□□ -0.27
SKIL-206ENST00000470571 TSPYL2Q9H2G4 693 aaPredicted RBP13.38□□□□□ -0.27
SKIL-206ENST00000470571 PELP1Q8IZL8 1130 aaKnown RBP13.37□□□□□ -0.27
SKIL-206ENST00000470571 POTEB2H3BUK9 544 aa13.34□□□□□ -0.27
SKIL-206ENST00000470571 OTUD5Q96G74 571 aa13.33□□□□□ -0.28
SKIL-206ENST00000470571 ASTLQ6HA08 431 aaPredicted RBP13.32□□□□□ -0.28
SKIL-206ENST00000470571 MIER1Q8N108 512 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms