RNA–Protein interactions for RNA: ENST00000470215.1

PHTF2-211, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 5

Gene PHTF2, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-211ENST00000470215 AEBP2Q6ZN18 517 aaPredicted RBP31.37■■■□□ 2.61
PHTF2-211ENST00000470215 CHIC1Q5VXU3 224 aa29.66■■■□□ 2.34
PHTF2-211ENST00000470215 SENP3Q9H4L4 574 aaPredicted RBP26.91■■□□□ 1.9
PHTF2-211ENST00000470215 PHF23Q9BUL5 403 aaPredicted RBP26.46■■□□□ 1.83
PHTF2-211ENST00000470215 FOXD1Q16676 465 aa25.02■■□□□ 1.6
PHTF2-211ENST00000470215 PLPPR3Q6T4P5 718 aa23.64■■□□□ 1.37
PHTF2-211ENST00000470215 MSH5O43196 834 aa23.61■■□□□ 1.37
PHTF2-211ENST00000470215 PIAS4Q8N2W9 510 aaPredicted RBP23.35■■□□□ 1.33
PHTF2-211ENST00000470215 POTEDQ86YR6 584 aa23.3■■□□□ 1.32
PHTF2-211ENST00000470215 PPP6R1Q9UPN7 881 aa23.18■■□□□ 1.3
PHTF2-211ENST00000470215 ADRA2BP18089 450 aa23.1■■□□□ 1.29
PHTF2-211ENST00000470215 SCAF1Q9H7N4 1312 aaKnown RBP21.3■■□□□ 1
PHTF2-211ENST00000470215 DMRT2Q9Y5R5 561 aa21.29■■□□□ 1
PHTF2-211ENST00000470215 MAPK8IP2Q13387 824 aaPredicted RBP21.26■□□□□ 0.99
PHTF2-211ENST00000470215 PPP4R3CPQ6ZMV5 832 aa20.64■□□□□ 0.89
PHTF2-211ENST00000470215 HOXD11P31277 338 aaPredicted RBP20.43■□□□□ 0.86
PHTF2-211ENST00000470215 DCAF8L1A6NGE4 600 aa20.35■□□□□ 0.85
PHTF2-211ENST00000470215 CNKSR2Q8WXI2 1034 aa20.35■□□□□ 0.85
PHTF2-211ENST00000470215 CACNB1Q02641 598 aaPredicted RBP20.32■□□□□ 0.84
PHTF2-211ENST00000470215 RNF216Q9NWF9 866 aaPredicted RBP20.23■□□□□ 0.83
PHTF2-211ENST00000470215 RNF39Q9H2S5 420 aa20.08■□□□□ 0.81
PHTF2-211ENST00000470215 DNAJC5BQ9UF47 199 aa19.88■□□□□ 0.77
PHTF2-211ENST00000470215 NCBP3Q53F19 620 aaKnown RBP19.87■□□□□ 0.77
PHTF2-211ENST00000470215 C1QBPQ07021 282 aaKnown RBP19.82■□□□□ 0.76
PHTF2-211ENST00000470215 NPM3O75607 178 aaKnown RBP19.49■□□□□ 0.71
PHTF2-211ENST00000470215 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.44■□□□□ 0.7
PHTF2-211ENST00000470215 U3KPZ7 1027 aaPredicted RBP18.99■□□□□ 0.63
PHTF2-211ENST00000470215 KCNA4P22459 653 aa18.89■□□□□ 0.61
PHTF2-211ENST00000470215 CAPN15O75808 1086 aa18.75■□□□□ 0.59
PHTF2-211ENST00000470215 SPINK5Q9NQ38 1064 aaPredicted RBP18.73■□□□□ 0.59
PHTF2-211ENST00000470215 DSG3P32926 999 aa18.71■□□□□ 0.59
PHTF2-211ENST00000470215 SLC4A2P04920 1241 aa18.65■□□□□ 0.58
PHTF2-211ENST00000470215 APLP2Q06481 763 aa18.58■□□□□ 0.56
PHTF2-211ENST00000470215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.49■□□□□ 0.55
PHTF2-211ENST00000470215 HNRNPUL2Q1KMD3 747 aaKnown RBP18.49■□□□□ 0.55
PHTF2-211ENST00000470215 ZNF219Q9P2Y4 722 aaPredicted RBP18.44■□□□□ 0.54
PHTF2-211ENST00000470215 TRHP20396 242 aaPredicted RBP18.38■□□□□ 0.53
PHTF2-211ENST00000470215 SAMD1Q6SPF0 538 aaPredicted RBP18.35■□□□□ 0.53
PHTF2-211ENST00000470215 ABCB7O75027 752 aa18.25■□□□□ 0.51
PHTF2-211ENST00000470215 POTEHQ6S545 545 aa18.24■□□□□ 0.51
PHTF2-211ENST00000470215 MYCNP04198 464 aaPredicted RBP18.09■□□□□ 0.49
PHTF2-211ENST00000470215 RBM42Q9BTD8 480 aaKnown RBP17.95■□□□□ 0.46
PHTF2-211ENST00000470215 POLA2Q14181 598 aa17.86■□□□□ 0.45
PHTF2-211ENST00000470215 SLC4A1APQ9BWU0 796 aaKnown RBP17.83■□□□□ 0.44
PHTF2-211ENST00000470215 FOXD4L1Q9NU39 408 aa17.77■□□□□ 0.44
PHTF2-211ENST00000470215 ZBTB12Q9Y330 459 aaPredicted RBP17.6■□□□□ 0.41
PHTF2-211ENST00000470215 ATF5Q9Y2D1 282 aaPredicted RBP17.57■□□□□ 0.4
PHTF2-211ENST00000470215 CHRDL2Q6WN34 429 aa17.56■□□□□ 0.4
PHTF2-211ENST00000470215 AKT1S1Q96B36 256 aa17.46■□□□□ 0.39
PHTF2-211ENST00000470215 ZBTB22O15209 634 aa17.33■□□□□ 0.36
PHTF2-211ENST00000470215 ATXN8OSP0DMR3 200 aa17.31■□□□□ 0.36
PHTF2-211ENST00000470215 OSCARQ8IYS5 282 aa17.28■□□□□ 0.36
PHTF2-211ENST00000470215 REM2Q8IYK8 340 aaPredicted RBP17.24■□□□□ 0.35
PHTF2-211ENST00000470215 PIP4P2Q8N4L2 257 aa17.08■□□□□ 0.32
PHTF2-211ENST00000470215 PITPNM1O00562 1244 aa17.05■□□□□ 0.32
PHTF2-211ENST00000470215 FBLN2P98095 1184 aa17.03■□□□□ 0.32
PHTF2-211ENST00000470215 SP7Q8TDD2 431 aaPredicted RBP17.02■□□□□ 0.32
PHTF2-211ENST00000470215 SPDYE2BA6NHP3 402 aa16.99■□□□□ 0.31
PHTF2-211ENST00000470215 SPDYE6P0CI01 402 aa16.99■□□□□ 0.31
PHTF2-211ENST00000470215 SPDYE2Q495Y8 402 aa16.99■□□□□ 0.31
PHTF2-211ENST00000470215 FXR2P51116 673 aaKnown RBP eCLIP16.98■□□□□ 0.31
PHTF2-211ENST00000470215 HAX1O00165 279 aa16.83■□□□□ 0.28
PHTF2-211ENST00000470215 MKRN4PQ13434 485 aaPredicted RBP16.78■□□□□ 0.28
PHTF2-211ENST00000470215 SPDYE1Q8NFV5 336 aaPredicted RBP16.75■□□□□ 0.27
PHTF2-211ENST00000470215 SSUH2Q9Y2M2 353 aa16.72■□□□□ 0.27
PHTF2-211ENST00000470215 ZNF692Q9BU19 519 aaPredicted RBP16.71■□□□□ 0.27
PHTF2-211ENST00000470215 CLEC11AQ9Y240 323 aa16.64■□□□□ 0.25
PHTF2-211ENST00000470215 PRKAR2AP13861 404 aaKnown RBP16.61■□□□□ 0.25
PHTF2-211ENST00000470215 EVX2Q03828 476 aa16.53■□□□□ 0.24
PHTF2-211ENST00000470215 C19orf67A6NJJ6 358 aa16.44■□□□□ 0.22
PHTF2-211ENST00000470215 PABPN1Q86U42 306 aaKnown RBP eCLIP16.44■□□□□ 0.22
PHTF2-211ENST00000470215 PRR29P0C7W0 189 aa16.39■□□□□ 0.21
PHTF2-211ENST00000470215 CSRNP3Q8WYN3 585 aa16.37■□□□□ 0.21
PHTF2-211ENST00000470215 CHADLQ6NUI6 762 aa16.31■□□□□ 0.2
PHTF2-211ENST00000470215 GABBR2O75899 941 aa16.22■□□□□ 0.19
PHTF2-211ENST00000470215 FARP1Q9Y4F1 1045 aaPredicted RBP16.13■□□□□ 0.17
PHTF2-211ENST00000470215 CD44P16070 742 aaKnown RBP16.08■□□□□ 0.16
PHTF2-211ENST00000470215 CLCN6P51797 869 aa16.05■□□□□ 0.16
PHTF2-211ENST00000470215 STAG3Q9UJ98 1225 aa16.04■□□□□ 0.16
PHTF2-211ENST00000470215 EHMT2Q96KQ7 1210 aa16■□□□□ 0.15
PHTF2-211ENST00000470215 LHX8Q68G74 356 aa15.94■□□□□ 0.14
PHTF2-211ENST00000470215 SPDYE4A6NLX3 237 aa15.93■□□□□ 0.14
PHTF2-211ENST00000470215 CREBZFQ9NS37 354 aa15.9■□□□□ 0.14
PHTF2-211ENST00000470215 ZNF579Q8NAF0 562 aaKnown RBP15.86■□□□□ 0.13
PHTF2-211ENST00000470215 POTEIP0CG38 1075 aa15.83■□□□□ 0.12
PHTF2-211ENST00000470215 ZRANB1Q9UGI0 708 aa15.81■□□□□ 0.12
PHTF2-211ENST00000470215 DCBLD2Q96PD2 775 aa15.77■□□□□ 0.12
PHTF2-211ENST00000470215 PAK3O75914 559 aaPredicted RBP15.71■□□□□ 0.11
PHTF2-211ENST00000470215 NPM1P06748 294 aaKnown RBP eCLIP15.68■□□□□ 0.1
PHTF2-211ENST00000470215 MNX1P50219 401 aaPredicted RBP15.61■□□□□ 0.09
PHTF2-211ENST00000470215 GALR2O43603 387 aaPredicted RBP15.6■□□□□ 0.09
PHTF2-211ENST00000470215 PROM2Q8N271 834 aa15.54■□□□□ 0.08
PHTF2-211ENST00000470215 PHF12Q96QT6 1004 aa15.53■□□□□ 0.08
PHTF2-211ENST00000470215 MS4A3Q96HJ5 214 aa15.34■□□□□ 0.05
PHTF2-211ENST00000470215 ASTLQ6HA08 431 aaPredicted RBP15.33■□□□□ 0.04
PHTF2-211ENST00000470215 OTUD5Q96G74 571 aa15.32■□□□□ 0.04
PHTF2-211ENST00000470215 PLEKHG5O94827 1062 aa15.3■□□□□ 0.04
PHTF2-211ENST00000470215 PELP1Q8IZL8 1130 aaKnown RBP15.3■□□□□ 0.04
PHTF2-211ENST00000470215 POTEB2H3BUK9 544 aa15.29■□□□□ 0.04
PHTF2-211ENST00000470215 TSPYL2Q9H2G4 693 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms