RNA–Protein interactions for RNA: ENST00000470158.1

C10orf88-203, Transcript of chromosome 10 open reading frame 88, humanhuman

TSL 3

Gene C10orf88, Length 675 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C10orf88-203ENST00000470158 AEBP2Q6ZN18 517 aaPredicted RBP27.9■■■□□ 2.06
C10orf88-203ENST00000470158 CHIC1Q5VXU3 224 aa27.53■■■□□ 2
C10orf88-203ENST00000470158 PHF23Q9BUL5 403 aaPredicted RBP24.21■■□□□ 1.47
C10orf88-203ENST00000470158 SENP3Q9H4L4 574 aaPredicted RBP23.69■■□□□ 1.38
C10orf88-203ENST00000470158 PLPPR3Q6T4P5 718 aa22.49■■□□□ 1.19
C10orf88-203ENST00000470158 FOXD1Q16676 465 aa21.91■■□□□ 1.1
C10orf88-203ENST00000470158 ADRA2BP18089 450 aa21.25■□□□□ 0.99
C10orf88-203ENST00000470158 PPP6R1Q9UPN7 881 aa21.25■□□□□ 0.99
C10orf88-203ENST00000470158 PIAS4Q8N2W9 510 aaPredicted RBP20.72■□□□□ 0.91
C10orf88-203ENST00000470158 MSH5O43196 834 aa20.17■□□□□ 0.82
C10orf88-203ENST00000470158 PPP4R3CPQ6ZMV5 832 aa19.81■□□□□ 0.76
C10orf88-203ENST00000470158 KCNA4P22459 653 aa19.6■□□□□ 0.73
C10orf88-203ENST00000470158 SCAF1Q9H7N4 1312 aaKnown RBP19.53■□□□□ 0.72
C10orf88-203ENST00000470158 NCBP3Q53F19 620 aaKnown RBP19.41■□□□□ 0.7
C10orf88-203ENST00000470158 CNKSR2Q8WXI2 1034 aa19.24■□□□□ 0.67
C10orf88-203ENST00000470158 MAPK8IP2Q13387 824 aaPredicted RBP19.19■□□□□ 0.66
C10orf88-203ENST00000470158 NPM3O75607 178 aaKnown RBP19.08■□□□□ 0.64
C10orf88-203ENST00000470158 DMRT2Q9Y5R5 561 aa18.94■□□□□ 0.62
C10orf88-203ENST00000470158 RNF216Q9NWF9 866 aaPredicted RBP18.81■□□□□ 0.6
C10orf88-203ENST00000470158 SLC4A1APQ9BWU0 796 aaKnown RBP18.74■□□□□ 0.59
C10orf88-203ENST00000470158 HOXD11P31277 338 aaPredicted RBP18.67■□□□□ 0.58
C10orf88-203ENST00000470158 DNAJC5BQ9UF47 199 aa18.62■□□□□ 0.57
C10orf88-203ENST00000470158 EHMT2Q96KQ7 1210 aa18.42■□□□□ 0.54
C10orf88-203ENST00000470158 CSRNP3Q8WYN3 585 aa18.15■□□□□ 0.5
C10orf88-203ENST00000470158 DCAF8L1A6NGE4 600 aa18.03■□□□□ 0.48
C10orf88-203ENST00000470158 ZBTB22O15209 634 aa18.03■□□□□ 0.48
C10orf88-203ENST00000470158 FOXD4L1Q9NU39 408 aa18.02■□□□□ 0.48
C10orf88-203ENST00000470158 SLC4A2P04920 1241 aa17.95■□□□□ 0.46
C10orf88-203ENST00000470158 POTEDQ86YR6 584 aa17.88■□□□□ 0.45
C10orf88-203ENST00000470158 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.75■□□□□ 0.43
C10orf88-203ENST00000470158 MYCNP04198 464 aaPredicted RBP17.66■□□□□ 0.42
C10orf88-203ENST00000470158 U3KPZ7 1027 aaPredicted RBP17.5■□□□□ 0.39
C10orf88-203ENST00000470158 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.43■□□□□ 0.38
C10orf88-203ENST00000470158 HNRNPUL2Q1KMD3 747 aaKnown RBP17.43■□□□□ 0.38
C10orf88-203ENST00000470158 ATXN8OSP0DMR3 200 aa17.42■□□□□ 0.38
C10orf88-203ENST00000470158 SAMD1Q6SPF0 538 aaPredicted RBP17.35■□□□□ 0.37
C10orf88-203ENST00000470158 RNF39Q9H2S5 420 aa17.29■□□□□ 0.36
C10orf88-203ENST00000470158 APLP2Q06481 763 aa17.2■□□□□ 0.34
C10orf88-203ENST00000470158 C1QBPQ07021 282 aaKnown RBP17.12■□□□□ 0.33
C10orf88-203ENST00000470158 ATF5Q9Y2D1 282 aaPredicted RBP17.1■□□□□ 0.33
C10orf88-203ENST00000470158 SPINK5Q9NQ38 1064 aaPredicted RBP16.9■□□□□ 0.3
C10orf88-203ENST00000470158 ZNF219Q9P2Y4 722 aaPredicted RBP16.88■□□□□ 0.29
C10orf88-203ENST00000470158 CAPN15O75808 1086 aa16.83■□□□□ 0.28
C10orf88-203ENST00000470158 TRHP20396 242 aaPredicted RBP16.8■□□□□ 0.28
C10orf88-203ENST00000470158 CACNB1Q02641 598 aaPredicted RBP16.63■□□□□ 0.25
C10orf88-203ENST00000470158 POLA2Q14181 598 aa16.61■□□□□ 0.25
C10orf88-203ENST00000470158 DSG3P32926 999 aa16.52■□□□□ 0.24
C10orf88-203ENST00000470158 ABCB7O75027 752 aa16.5■□□□□ 0.23
C10orf88-203ENST00000470158 FBLN2P98095 1184 aa16.42■□□□□ 0.22
C10orf88-203ENST00000470158 ZBTB12Q9Y330 459 aaPredicted RBP16.42■□□□□ 0.22
C10orf88-203ENST00000470158 MKRN4PQ13434 485 aaPredicted RBP16.39■□□□□ 0.21
C10orf88-203ENST00000470158 FKBP8Q14318 412 aa16.38■□□□□ 0.21
C10orf88-203ENST00000470158 SPDYE4A6NLX3 237 aa16.15■□□□□ 0.18
C10orf88-203ENST00000470158 OSCARQ8IYS5 282 aa16.01■□□□□ 0.15
C10orf88-203ENST00000470158 SPDYE2BA6NHP3 402 aa15.98■□□□□ 0.15
C10orf88-203ENST00000470158 SPDYE6P0CI01 402 aa15.98■□□□□ 0.15
C10orf88-203ENST00000470158 SPDYE2Q495Y8 402 aa15.98■□□□□ 0.15
C10orf88-203ENST00000470158 PROM2Q8N271 834 aa15.98■□□□□ 0.15
C10orf88-203ENST00000470158 ZNF692Q9BU19 519 aaPredicted RBP15.92■□□□□ 0.14
C10orf88-203ENST00000470158 SSUH2Q9Y2M2 353 aa15.88■□□□□ 0.13
C10orf88-203ENST00000470158 FBXO3Q9UK99 471 aa15.81■□□□□ 0.12
C10orf88-203ENST00000470158 RBM42Q9BTD8 480 aaKnown RBP15.78■□□□□ 0.12
C10orf88-203ENST00000470158 PABPN1Q86U42 306 aaKnown RBP eCLIP15.7■□□□□ 0.1
C10orf88-203ENST00000470158 AKT1S1Q96B36 256 aa15.63■□□□□ 0.09
C10orf88-203ENST00000470158 STAG3Q9UJ98 1225 aa15.57■□□□□ 0.08
C10orf88-203ENST00000470158 VASPP50552 380 aaPredicted RBP15.54■□□□□ 0.08
C10orf88-203ENST00000470158 REM2Q8IYK8 340 aaPredicted RBP15.44■□□□□ 0.06
C10orf88-203ENST00000470158 SPDYE1Q8NFV5 336 aaPredicted RBP15.44■□□□□ 0.06
C10orf88-203ENST00000470158 AMER1Q5JTC6 1135 aaPredicted RBP15.41■□□□□ 0.06
C10orf88-203ENST00000470158 IFNLR1Q8IU57 520 aaPredicted RBP15.33■□□□□ 0.04
C10orf88-203ENST00000470158 RTN4Q9NQC3 1192 aaKnown RBP15.31■□□□□ 0.04
C10orf88-203ENST00000470158 PLCD3Q8N3E9 789 aa15.29■□□□□ 0.04
C10orf88-203ENST00000470158 CLEC11AQ9Y240 323 aa15.29■□□□□ 0.04
C10orf88-203ENST00000470158 MIER1Q8N108 512 aa15.28■□□□□ 0.04
C10orf88-203ENST00000470158 PITPNM1O00562 1244 aa15.25■□□□□ 0.03
C10orf88-203ENST00000470158 PLEKHG5O94827 1062 aa15.23■□□□□ 0.03
C10orf88-203ENST00000470158 PRR29P0C7W0 189 aa15.23■□□□□ 0.03
C10orf88-203ENST00000470158 KLHL34Q8N239 644 aa15.2■□□□□ 0.02
C10orf88-203ENST00000470158 ZBTB47Q9UFB7 747 aaPredicted RBP15.18■□□□□ 0.02
C10orf88-203ENST00000470158 SPOCK2Q92563 424 aa15.14■□□□□ 0.01
C10orf88-203ENST00000470158 CREBZFQ9NS37 354 aa15.09■□□□□ 0.01
C10orf88-203ENST00000470158 MNX1P50219 401 aaPredicted RBP14.98□□□□□ -0.01
C10orf88-203ENST00000470158 CHRDL2Q6WN34 429 aa14.98□□□□□ -0.01
C10orf88-203ENST00000470158 FXR2P51116 673 aaKnown RBP eCLIP14.95□□□□□ -0.02
C10orf88-203ENST00000470158 PKD2Q13563 968 aa14.92□□□□□ -0.02
C10orf88-203ENST00000470158 NPM1P06748 294 aaKnown RBP eCLIP14.89□□□□□ -0.03
C10orf88-203ENST00000470158 NUBP1P53384 320 aa14.89□□□□□ -0.03
C10orf88-203ENST00000470158 CHADLQ6NUI6 762 aa14.89□□□□□ -0.03
C10orf88-203ENST00000470158 PRKAR2AP13861 404 aaKnown RBP14.87□□□□□ -0.03
C10orf88-203ENST00000470158 PIP4P2Q8N4L2 257 aa14.84□□□□□ -0.03
C10orf88-203ENST00000470158 FARP1Q9Y4F1 1045 aaPredicted RBP14.83□□□□□ -0.04
C10orf88-203ENST00000470158 GSE1Q14687 1217 aa14.82□□□□□ -0.04
C10orf88-203ENST00000470158 CIZ1Q9ULV3 898 aaPredicted RBP14.81□□□□□ -0.04
C10orf88-203ENST00000470158 TRIM41Q8WV44 630 aa14.78□□□□□ -0.04
C10orf88-203ENST00000470158 ECM2O94769 699 aaPredicted RBP14.77□□□□□ -0.05
C10orf88-203ENST00000470158 FAM212AQ96EL1 285 aa14.77□□□□□ -0.05
C10orf88-203ENST00000470158 RASEFQ8IZ41 740 aa14.75□□□□□ -0.05
C10orf88-203ENST00000470158 DCAF8Q5TAQ9 597 aa14.74□□□□□ -0.05
C10orf88-203ENST00000470158 RGL2O15211 777 aa14.61□□□□□ -0.07
C10orf88-203ENST00000470158 CHRM1P11229 460 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms