RNA–Protein interactions for RNA: ENST00000470132.1

TOP2B-205, Transcript of DNA topoisomerase II beta, humanhuman

TSL 3

Gene TOP2B, Length 451 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-205ENST00000470132 AEBP2Q6ZN18 517 aaPredicted RBP22.37■■□□□ 1.17
TOP2B-205ENST00000470132 CHIC1Q5VXU3 224 aa21.49■■□□□ 1.03
TOP2B-205ENST00000470132 SENP3Q9H4L4 574 aaPredicted RBP19.18■□□□□ 0.66
TOP2B-205ENST00000470132 PHF23Q9BUL5 403 aaPredicted RBP18.92■□□□□ 0.62
TOP2B-205ENST00000470132 FOXD1Q16676 465 aa17.78■□□□□ 0.44
TOP2B-205ENST00000470132 PLPPR3Q6T4P5 718 aa17.3■□□□□ 0.36
TOP2B-205ENST00000470132 PPP6R1Q9UPN7 881 aa16.72■□□□□ 0.27
TOP2B-205ENST00000470132 ADRA2BP18089 450 aa16.71■□□□□ 0.27
TOP2B-205ENST00000470132 PIAS4Q8N2W9 510 aaPredicted RBP16.71■□□□□ 0.27
TOP2B-205ENST00000470132 MSH5O43196 834 aa16.67■□□□□ 0.26
TOP2B-205ENST00000470132 POTEDQ86YR6 584 aa15.89■□□□□ 0.13
TOP2B-205ENST00000470132 SCAF1Q9H7N4 1312 aaKnown RBP15.43■□□□□ 0.06
TOP2B-205ENST00000470132 MAPK8IP2Q13387 824 aaPredicted RBP15.28■□□□□ 0.04
TOP2B-205ENST00000470132 DMRT2Q9Y5R5 561 aa15.19■□□□□ 0.02
TOP2B-205ENST00000470132 PPP4R3CPQ6ZMV5 832 aa15.16■□□□□ 0.02
TOP2B-205ENST00000470132 CNKSR2Q8WXI2 1034 aa14.86□□□□□ -0.03
TOP2B-205ENST00000470132 NCBP3Q53F19 620 aaKnown RBP14.72□□□□□ -0.05
TOP2B-205ENST00000470132 HOXD11P31277 338 aaPredicted RBP14.7□□□□□ -0.06
TOP2B-205ENST00000470132 RNF216Q9NWF9 866 aaPredicted RBP14.67□□□□□ -0.06
TOP2B-205ENST00000470132 DCAF8L1A6NGE4 600 aa14.64□□□□□ -0.07
TOP2B-205ENST00000470132 NPM3O75607 178 aaKnown RBP14.38□□□□□ -0.11
TOP2B-205ENST00000470132 KCNA4P22459 653 aa14.26□□□□□ -0.13
TOP2B-205ENST00000470132 CACNB1Q02641 598 aaPredicted RBP14.2□□□□□ -0.14
TOP2B-205ENST00000470132 DNAJC5BQ9UF47 199 aa14.2□□□□□ -0.14
TOP2B-205ENST00000470132 RNF39Q9H2S5 420 aa14.17□□□□□ -0.14
TOP2B-205ENST00000470132 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.08□□□□□ -0.16
TOP2B-205ENST00000470132 C1QBPQ07021 282 aaKnown RBP14.03□□□□□ -0.16
TOP2B-205ENST00000470132 U3KPZ7 1027 aaPredicted RBP13.72□□□□□ -0.21
TOP2B-205ENST00000470132 SLC4A2P04920 1241 aa13.67□□□□□ -0.22
TOP2B-205ENST00000470132 SLC4A1APQ9BWU0 796 aaKnown RBP13.56□□□□□ -0.24
TOP2B-205ENST00000470132 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.52□□□□□ -0.25
TOP2B-205ENST00000470132 CAPN15O75808 1086 aa13.52□□□□□ -0.25
TOP2B-205ENST00000470132 APLP2Q06481 763 aa13.52□□□□□ -0.25
TOP2B-205ENST00000470132 HNRNPUL2Q1KMD3 747 aaKnown RBP13.52□□□□□ -0.25
TOP2B-205ENST00000470132 SPINK5Q9NQ38 1064 aaPredicted RBP13.46□□□□□ -0.25
TOP2B-205ENST00000470132 SAMD1Q6SPF0 538 aaPredicted RBP13.42□□□□□ -0.26
TOP2B-205ENST00000470132 MYCNP04198 464 aaPredicted RBP13.36□□□□□ -0.27
TOP2B-205ENST00000470132 ZNF219Q9P2Y4 722 aaPredicted RBP13.34□□□□□ -0.27
TOP2B-205ENST00000470132 TRHP20396 242 aaPredicted RBP13.33□□□□□ -0.28
TOP2B-205ENST00000470132 DSG3P32926 999 aa13.33□□□□□ -0.28
TOP2B-205ENST00000470132 FOXD4L1Q9NU39 408 aa13.3□□□□□ -0.28
TOP2B-205ENST00000470132 ABCB7O75027 752 aa13.17□□□□□ -0.3
TOP2B-205ENST00000470132 ZBTB22O15209 634 aa13.05□□□□□ -0.32
TOP2B-205ENST00000470132 POLA2Q14181 598 aa12.99□□□□□ -0.33
TOP2B-205ENST00000470132 ATF5Q9Y2D1 282 aaPredicted RBP12.93□□□□□ -0.34
TOP2B-205ENST00000470132 ATXN8OSP0DMR3 200 aa12.9□□□□□ -0.34
TOP2B-205ENST00000470132 RBM42Q9BTD8 480 aaKnown RBP12.82□□□□□ -0.36
TOP2B-205ENST00000470132 ZBTB12Q9Y330 459 aaPredicted RBP12.82□□□□□ -0.36
TOP2B-205ENST00000470132 CSRNP3Q8WYN3 585 aa12.66□□□□□ -0.38
TOP2B-205ENST00000470132 EHMT2Q96KQ7 1210 aa12.63□□□□□ -0.39
TOP2B-205ENST00000470132 FBLN2P98095 1184 aa12.58□□□□□ -0.4
TOP2B-205ENST00000470132 OSCARQ8IYS5 282 aa12.55□□□□□ -0.4
TOP2B-205ENST00000470132 POTEHQ6S545 545 aa12.52□□□□□ -0.41
TOP2B-205ENST00000470132 AKT1S1Q96B36 256 aa12.52□□□□□ -0.41
TOP2B-205ENST00000470132 CHRDL2Q6WN34 429 aa12.41□□□□□ -0.42
TOP2B-205ENST00000470132 SPDYE2BA6NHP3 402 aa12.4□□□□□ -0.42
TOP2B-205ENST00000470132 SPDYE6P0CI01 402 aa12.4□□□□□ -0.42
TOP2B-205ENST00000470132 SPDYE2Q495Y8 402 aa12.4□□□□□ -0.42
TOP2B-205ENST00000470132 REM2Q8IYK8 340 aaPredicted RBP12.37□□□□□ -0.43
TOP2B-205ENST00000470132 MKRN4PQ13434 485 aaPredicted RBP12.36□□□□□ -0.43
TOP2B-205ENST00000470132 ZNF692Q9BU19 519 aaPredicted RBP12.28□□□□□ -0.44
TOP2B-205ENST00000470132 PITPNM1O00562 1244 aa12.21□□□□□ -0.45
TOP2B-205ENST00000470132 SSUH2Q9Y2M2 353 aa12.19□□□□□ -0.46
TOP2B-205ENST00000470132 SPDYE1Q8NFV5 336 aaPredicted RBP12.16□□□□□ -0.46
TOP2B-205ENST00000470132 PIP4P2Q8N4L2 257 aa12.12□□□□□ -0.47
TOP2B-205ENST00000470132 CLEC11AQ9Y240 323 aa12.12□□□□□ -0.47
TOP2B-205ENST00000470132 PABPN1Q86U42 306 aaKnown RBP eCLIP12.08□□□□□ -0.48
TOP2B-205ENST00000470132 FXR2P51116 673 aaKnown RBP eCLIP12.07□□□□□ -0.48
TOP2B-205ENST00000470132 PRR29P0C7W0 189 aa11.96□□□□□ -0.49
TOP2B-205ENST00000470132 SPDYE4A6NLX3 237 aa11.95□□□□□ -0.5
TOP2B-205ENST00000470132 PRKAR2AP13861 404 aaKnown RBP11.93□□□□□ -0.5
TOP2B-205ENST00000470132 HAX1O00165 279 aa11.92□□□□□ -0.5
TOP2B-205ENST00000470132 STAG3Q9UJ98 1225 aa11.86□□□□□ -0.51
TOP2B-205ENST00000470132 SP7Q8TDD2 431 aaPredicted RBP11.82□□□□□ -0.52
TOP2B-205ENST00000470132 CHADLQ6NUI6 762 aa11.8□□□□□ -0.52
TOP2B-205ENST00000470132 C19orf67A6NJJ6 358 aa11.68□□□□□ -0.54
TOP2B-205ENST00000470132 FARP1Q9Y4F1 1045 aaPredicted RBP11.68□□□□□ -0.54
TOP2B-205ENST00000470132 EVX2Q03828 476 aa11.66□□□□□ -0.54
TOP2B-205ENST00000470132 PROM2Q8N271 834 aa11.62□□□□□ -0.55
TOP2B-205ENST00000470132 CREBZFQ9NS37 354 aa11.61□□□□□ -0.55
TOP2B-205ENST00000470132 CD44P16070 742 aaKnown RBP11.57□□□□□ -0.56
TOP2B-205ENST00000470132 FKBP8Q14318 412 aa11.53□□□□□ -0.56
TOP2B-205ENST00000470132 NPM1P06748 294 aaKnown RBP eCLIP11.52□□□□□ -0.57
TOP2B-205ENST00000470132 GABBR2O75899 941 aa11.48□□□□□ -0.57
TOP2B-205ENST00000470132 PLEKHG5O94827 1062 aa11.48□□□□□ -0.57
TOP2B-205ENST00000470132 PAK3O75914 559 aaPredicted RBP11.47□□□□□ -0.57
TOP2B-205ENST00000470132 CLCN6P51797 869 aa11.46□□□□□ -0.57
TOP2B-205ENST00000470132 ZRANB1Q9UGI0 708 aa11.45□□□□□ -0.58
TOP2B-205ENST00000470132 MIER1Q8N108 512 aa11.42□□□□□ -0.58
TOP2B-205ENST00000470132 MNX1P50219 401 aaPredicted RBP11.4□□□□□ -0.58
TOP2B-205ENST00000470132 ZNF579Q8NAF0 562 aaKnown RBP11.39□□□□□ -0.59
TOP2B-205ENST00000470132 PLCD3Q8N3E9 789 aa11.37□□□□□ -0.59
TOP2B-205ENST00000470132 FBXO3Q9UK99 471 aa11.31□□□□□ -0.6
TOP2B-205ENST00000470132 ZBTB47Q9UFB7 747 aaPredicted RBP11.3□□□□□ -0.6
TOP2B-205ENST00000470132 DCBLD2Q96PD2 775 aa11.28□□□□□ -0.6
TOP2B-205ENST00000470132 PHF12Q96QT6 1004 aa11.26□□□□□ -0.61
TOP2B-205ENST00000470132 TSPYL2Q9H2G4 693 aaPredicted RBP11.26□□□□□ -0.61
TOP2B-205ENST00000470132 GALR2O43603 387 aaPredicted RBP11.21□□□□□ -0.61
TOP2B-205ENST00000470132 POTEIP0CG38 1075 aa11.17□□□□□ -0.62
TOP2B-205ENST00000470132 CCDC61Q9Y6R9 512 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms