RNA–Protein interactions for RNA: ENST00000469417.1

PEX1-205, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 2

Gene PEX1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-205ENST00000469417 AEBP2Q6ZN18 517 aaPredicted RBP29.58■■■□□ 2.33
PEX1-205ENST00000469417 CHIC1Q5VXU3 224 aa28.2■■■□□ 2.1
PEX1-205ENST00000469417 SENP3Q9H4L4 574 aaPredicted RBP25.21■■□□□ 1.63
PEX1-205ENST00000469417 PHF23Q9BUL5 403 aaPredicted RBP24.89■■□□□ 1.58
PEX1-205ENST00000469417 FOXD1Q16676 465 aa23.48■■□□□ 1.35
PEX1-205ENST00000469417 PLPPR3Q6T4P5 718 aa22.55■■□□□ 1.2
PEX1-205ENST00000469417 PPP6R1Q9UPN7 881 aa22.03■■□□□ 1.12
PEX1-205ENST00000469417 MSH5O43196 834 aa21.95■■□□□ 1.1
PEX1-205ENST00000469417 ADRA2BP18089 450 aa21.91■■□□□ 1.1
PEX1-205ENST00000469417 PIAS4Q8N2W9 510 aaPredicted RBP21.9■■□□□ 1.1
PEX1-205ENST00000469417 POTEDQ86YR6 584 aa21.24■□□□□ 0.99
PEX1-205ENST00000469417 MAPK8IP2Q13387 824 aaPredicted RBP20.1■□□□□ 0.81
PEX1-205ENST00000469417 SCAF1Q9H7N4 1312 aaKnown RBP20.09■□□□□ 0.81
PEX1-205ENST00000469417 DMRT2Q9Y5R5 561 aa20.03■□□□□ 0.8
PEX1-205ENST00000469417 PPP4R3CPQ6ZMV5 832 aa19.76■□□□□ 0.75
PEX1-205ENST00000469417 CNKSR2Q8WXI2 1034 aa19.39■□□□□ 0.69
PEX1-205ENST00000469417 HOXD11P31277 338 aaPredicted RBP19.37■□□□□ 0.69
PEX1-205ENST00000469417 RNF216Q9NWF9 866 aaPredicted RBP19.22■□□□□ 0.67
PEX1-205ENST00000469417 DCAF8L1A6NGE4 600 aa19.02■□□□□ 0.64
PEX1-205ENST00000469417 NCBP3Q53F19 620 aaKnown RBP19.02■□□□□ 0.64
PEX1-205ENST00000469417 DNAJC5BQ9UF47 199 aa18.77■□□□□ 0.6
PEX1-205ENST00000469417 NPM3O75607 178 aaKnown RBP18.76■□□□□ 0.59
PEX1-205ENST00000469417 RNF39Q9H2S5 420 aa18.76■□□□□ 0.59
PEX1-205ENST00000469417 CACNB1Q02641 598 aaPredicted RBP18.7■□□□□ 0.58
PEX1-205ENST00000469417 C1QBPQ07021 282 aaKnown RBP18.49■□□□□ 0.55
PEX1-205ENST00000469417 KCNA4P22459 653 aa18.46■□□□□ 0.55
PEX1-205ENST00000469417 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.32■□□□□ 0.52
PEX1-205ENST00000469417 U3KPZ7 1027 aaPredicted RBP18.02■□□□□ 0.48
PEX1-205ENST00000469417 SLC4A2P04920 1241 aa17.93■□□□□ 0.46
PEX1-205ENST00000469417 SPINK5Q9NQ38 1064 aaPredicted RBP17.69■□□□□ 0.42
PEX1-205ENST00000469417 CAPN15O75808 1086 aa17.6■□□□□ 0.41
PEX1-205ENST00000469417 DSG3P32926 999 aa17.58■□□□□ 0.4
PEX1-205ENST00000469417 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.54■□□□□ 0.4
PEX1-205ENST00000469417 HNRNPUL2Q1KMD3 747 aaKnown RBP17.54■□□□□ 0.4
PEX1-205ENST00000469417 APLP2Q06481 763 aa17.51■□□□□ 0.39
PEX1-205ENST00000469417 SAMD1Q6SPF0 538 aaPredicted RBP17.44■□□□□ 0.38
PEX1-205ENST00000469417 SLC4A1APQ9BWU0 796 aaKnown RBP17.42■□□□□ 0.38
PEX1-205ENST00000469417 ZNF219Q9P2Y4 722 aaPredicted RBP17.39■□□□□ 0.37
PEX1-205ENST00000469417 MYCNP04198 464 aaPredicted RBP17.35■□□□□ 0.37
PEX1-205ENST00000469417 TRHP20396 242 aaPredicted RBP17.33■□□□□ 0.36
PEX1-205ENST00000469417 FOXD4L1Q9NU39 408 aa17.22■□□□□ 0.35
PEX1-205ENST00000469417 ABCB7O75027 752 aa17.19■□□□□ 0.34
PEX1-205ENST00000469417 ZBTB22O15209 634 aa17.01■□□□□ 0.31
PEX1-205ENST00000469417 POLA2Q14181 598 aa16.95■□□□□ 0.3
PEX1-205ENST00000469417 ATF5Q9Y2D1 282 aaPredicted RBP16.93■□□□□ 0.3
PEX1-205ENST00000469417 ATXN8OSP0DMR3 200 aa16.75■□□□□ 0.27
PEX1-205ENST00000469417 RBM42Q9BTD8 480 aaKnown RBP16.75■□□□□ 0.27
PEX1-205ENST00000469417 POTEHQ6S545 545 aa16.65■□□□□ 0.26
PEX1-205ENST00000469417 ZBTB12Q9Y330 459 aaPredicted RBP16.65■□□□□ 0.26
PEX1-205ENST00000469417 AKT1S1Q96B36 256 aa16.41■□□□□ 0.22
PEX1-205ENST00000469417 OSCARQ8IYS5 282 aa16.38■□□□□ 0.21
PEX1-205ENST00000469417 CHRDL2Q6WN34 429 aa16.34■□□□□ 0.21
PEX1-205ENST00000469417 CSRNP3Q8WYN3 585 aa16.3■□□□□ 0.2
PEX1-205ENST00000469417 FBLN2P98095 1184 aa16.23■□□□□ 0.19
PEX1-205ENST00000469417 REM2Q8IYK8 340 aaPredicted RBP16.23■□□□□ 0.19
PEX1-205ENST00000469417 MKRN4PQ13434 485 aaPredicted RBP16.18■□□□□ 0.18
PEX1-205ENST00000469417 SPDYE2BA6NHP3 402 aa16.15■□□□□ 0.18
PEX1-205ENST00000469417 SPDYE6P0CI01 402 aa16.15■□□□□ 0.18
PEX1-205ENST00000469417 SPDYE2Q495Y8 402 aa16.15■□□□□ 0.18
PEX1-205ENST00000469417 PITPNM1O00562 1244 aa16.04■□□□□ 0.16
PEX1-205ENST00000469417 EHMT2Q96KQ7 1210 aa16■□□□□ 0.15
PEX1-205ENST00000469417 PIP4P2Q8N4L2 257 aa15.98■□□□□ 0.15
PEX1-205ENST00000469417 SSUH2Q9Y2M2 353 aa15.98■□□□□ 0.15
PEX1-205ENST00000469417 FXR2P51116 673 aaKnown RBP eCLIP15.94■□□□□ 0.14
PEX1-205ENST00000469417 ZNF692Q9BU19 519 aaPredicted RBP15.91■□□□□ 0.14
PEX1-205ENST00000469417 SPDYE1Q8NFV5 336 aaPredicted RBP15.81■□□□□ 0.12
PEX1-205ENST00000469417 CLEC11AQ9Y240 323 aa15.69■□□□□ 0.1
PEX1-205ENST00000469417 PABPN1Q86U42 306 aaKnown RBP eCLIP15.68■□□□□ 0.1
PEX1-205ENST00000469417 SP7Q8TDD2 431 aaPredicted RBP15.66■□□□□ 0.1
PEX1-205ENST00000469417 HAX1O00165 279 aa15.6■□□□□ 0.09
PEX1-205ENST00000469417 PRKAR2AP13861 404 aaKnown RBP15.6■□□□□ 0.09
PEX1-205ENST00000469417 PRR29P0C7W0 189 aa15.51■□□□□ 0.07
PEX1-205ENST00000469417 EVX2Q03828 476 aa15.47■□□□□ 0.07
PEX1-205ENST00000469417 C19orf67A6NJJ6 358 aa15.42■□□□□ 0.06
PEX1-205ENST00000469417 SPDYE4A6NLX3 237 aa15.42■□□□□ 0.06
PEX1-205ENST00000469417 CHADLQ6NUI6 762 aa15.42■□□□□ 0.06
PEX1-205ENST00000469417 STAG3Q9UJ98 1225 aa15.32■□□□□ 0.04
PEX1-205ENST00000469417 FARP1Q9Y4F1 1045 aaPredicted RBP15.26■□□□□ 0.03
PEX1-205ENST00000469417 PROM2Q8N271 834 aa15.2■□□□□ 0.02
PEX1-205ENST00000469417 CREBZFQ9NS37 354 aa15.19■□□□□ 0.02
PEX1-205ENST00000469417 GABBR2O75899 941 aa15.13■□□□□ 0.01
PEX1-205ENST00000469417 CD44P16070 742 aaKnown RBP15.11■□□□□ 0.01
PEX1-205ENST00000469417 CLCN6P51797 869 aa15.01□□□□□ -0.01
PEX1-205ENST00000469417 MNX1P50219 401 aaPredicted RBP15□□□□□ -0.01
PEX1-205ENST00000469417 ZNF579Q8NAF0 562 aaKnown RBP14.95□□□□□ -0.02
PEX1-205ENST00000469417 ZRANB1Q9UGI0 708 aa14.9□□□□□ -0.02
PEX1-205ENST00000469417 NPM1P06748 294 aaKnown RBP eCLIP14.88□□□□□ -0.03
PEX1-205ENST00000469417 POTEIP0CG38 1075 aa14.83□□□□□ -0.04
PEX1-205ENST00000469417 PAK3O75914 559 aaPredicted RBP14.79□□□□□ -0.04
PEX1-205ENST00000469417 GALR2O43603 387 aaPredicted RBP14.7□□□□□ -0.06
PEX1-205ENST00000469417 FKBP8Q14318 412 aa14.7□□□□□ -0.06
PEX1-205ENST00000469417 PHF12Q96QT6 1004 aa14.7□□□□□ -0.06
PEX1-205ENST00000469417 DCBLD2Q96PD2 775 aa14.68□□□□□ -0.06
PEX1-205ENST00000469417 LHX8Q68G74 356 aa14.67□□□□□ -0.06
PEX1-205ENST00000469417 MIER1Q8N108 512 aa14.66□□□□□ -0.06
PEX1-205ENST00000469417 PLEKHG5O94827 1062 aa14.63□□□□□ -0.07
PEX1-205ENST00000469417 CCDC61Q9Y6R9 512 aa14.6□□□□□ -0.07
PEX1-205ENST00000469417 TSPYL2Q9H2G4 693 aaPredicted RBP14.56□□□□□ -0.08
PEX1-205ENST00000469417 PLCD3Q8N3E9 789 aa14.54□□□□□ -0.08
PEX1-205ENST00000469417 MS4A3Q96HJ5 214 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms