RNA–Protein interactions for RNA: ENST00000469168.1

PUM3-203, Transcript of pumilio RNA binding family member 3, humanhuman

TSL 2

Gene PUM3, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-203ENST00000469168 AEBP2Q6ZN18 517 aaPredicted RBP23.43■■□□□ 1.34
PUM3-203ENST00000469168 CHIC1Q5VXU3 224 aa22.62■■□□□ 1.21
PUM3-203ENST00000469168 PHF23Q9BUL5 403 aaPredicted RBP19.9■□□□□ 0.78
PUM3-203ENST00000469168 SENP3Q9H4L4 574 aaPredicted RBP19.89■□□□□ 0.77
PUM3-203ENST00000469168 FOXD1Q16676 465 aa18.52■□□□□ 0.56
PUM3-203ENST00000469168 PLPPR3Q6T4P5 718 aa18.27■□□□□ 0.52
PUM3-203ENST00000469168 PPP6R1Q9UPN7 881 aa17.67■□□□□ 0.42
PUM3-203ENST00000469168 ADRA2BP18089 450 aa17.66■□□□□ 0.42
PUM3-203ENST00000469168 PIAS4Q8N2W9 510 aaPredicted RBP17.43■□□□□ 0.38
PUM3-203ENST00000469168 MSH5O43196 834 aa17.13■□□□□ 0.33
PUM3-203ENST00000469168 MAPK8IP2Q13387 824 aaPredicted RBP16.1■□□□□ 0.17
PUM3-203ENST00000469168 PPP4R3CPQ6ZMV5 832 aa16.1■□□□□ 0.17
PUM3-203ENST00000469168 SCAF1Q9H7N4 1312 aaKnown RBP16.1■□□□□ 0.17
PUM3-203ENST00000469168 POTEDQ86YR6 584 aa16.05■□□□□ 0.16
PUM3-203ENST00000469168 DMRT2Q9Y5R5 561 aa15.83■□□□□ 0.12
PUM3-203ENST00000469168 CNKSR2Q8WXI2 1034 aa15.67■□□□□ 0.1
PUM3-203ENST00000469168 NCBP3Q53F19 620 aaKnown RBP15.59■□□□□ 0.09
PUM3-203ENST00000469168 KCNA4P22459 653 aa15.49■□□□□ 0.07
PUM3-203ENST00000469168 RNF216Q9NWF9 866 aaPredicted RBP15.4■□□□□ 0.06
PUM3-203ENST00000469168 HOXD11P31277 338 aaPredicted RBP15.39■□□□□ 0.05
PUM3-203ENST00000469168 NPM3O75607 178 aaKnown RBP15.38■□□□□ 0.05
PUM3-203ENST00000469168 DCAF8L1A6NGE4 600 aa15.3■□□□□ 0.04
PUM3-203ENST00000469168 DNAJC5BQ9UF47 199 aa14.88□□□□□ -0.03
PUM3-203ENST00000469168 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.77□□□□□ -0.051e-6■■■□□ 16.8
PUM3-203ENST00000469168 SLC4A1APQ9BWU0 796 aaKnown RBP14.71□□□□□ -0.05
PUM3-203ENST00000469168 RNF39Q9H2S5 420 aa14.66□□□□□ -0.06
PUM3-203ENST00000469168 SLC4A2P04920 1241 aa14.57□□□□□ -0.08
PUM3-203ENST00000469168 CACNB1Q02641 598 aaPredicted RBP14.52□□□□□ -0.09
PUM3-203ENST00000469168 C1QBPQ07021 282 aaKnown RBP14.46□□□□□ -0.09
PUM3-203ENST00000469168 U3KPZ7 1027 aaPredicted RBP14.45□□□□□ -0.1
PUM3-203ENST00000469168 FOXD4L1Q9NU39 408 aa14.28□□□□□ -0.12
PUM3-203ENST00000469168 ZBTB22O15209 634 aa14.23□□□□□ -0.13
PUM3-203ENST00000469168 MYCNP04198 464 aaPredicted RBP14.19□□□□□ -0.14
PUM3-203ENST00000469168 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.16□□□□□ -0.14
PUM3-203ENST00000469168 HNRNPUL2Q1KMD3 747 aaKnown RBP14.16□□□□□ -0.14
PUM3-203ENST00000469168 SPINK5Q9NQ38 1064 aaPredicted RBP14.16□□□□□ -0.14
PUM3-203ENST00000469168 CAPN15O75808 1086 aa14.14□□□□□ -0.15
PUM3-203ENST00000469168 SAMD1Q6SPF0 538 aaPredicted RBP14.11□□□□□ -0.15
PUM3-203ENST00000469168 EHMT2Q96KQ7 1210 aa14.09□□□□□ -0.15
PUM3-203ENST00000469168 APLP2Q06481 763 aa14.07□□□□□ -0.16
PUM3-203ENST00000469168 TRHP20396 242 aaPredicted RBP14.03□□□□□ -0.16
PUM3-203ENST00000469168 CSRNP3Q8WYN3 585 aa13.95□□□□□ -0.18
PUM3-203ENST00000469168 ZNF219Q9P2Y4 722 aaPredicted RBP13.93□□□□□ -0.18
PUM3-203ENST00000469168 DSG3P32926 999 aa13.89□□□□□ -0.19
PUM3-203ENST00000469168 ATF5Q9Y2D1 282 aaPredicted RBP13.88□□□□□ -0.19
PUM3-203ENST00000469168 ABCB7O75027 752 aa13.87□□□□□ -0.19
PUM3-203ENST00000469168 ATXN8OSP0DMR3 200 aa13.75□□□□□ -0.21
PUM3-203ENST00000469168 POLA2Q14181 598 aa13.71□□□□□ -0.21
PUM3-203ENST00000469168 ZBTB12Q9Y330 459 aaPredicted RBP13.4□□□□□ -0.26
PUM3-203ENST00000469168 FBLN2P98095 1184 aa13.3□□□□□ -0.28
PUM3-203ENST00000469168 OSCARQ8IYS5 282 aa13.26□□□□□ -0.29
PUM3-203ENST00000469168 MKRN4PQ13434 485 aaPredicted RBP13.24□□□□□ -0.29
PUM3-203ENST00000469168 RBM42Q9BTD8 480 aaKnown RBP13.22□□□□□ -0.29
PUM3-203ENST00000469168 SLC24A1O60721 1099 aa13.05□□□□□ -0.32
PUM3-203ENST00000469168 SPDYE2BA6NHP3 402 aa13.03□□□□□ -0.32
PUM3-203ENST00000469168 SPDYE6P0CI01 402 aa13.03□□□□□ -0.32
PUM3-203ENST00000469168 SPDYE2Q495Y8 402 aa13.03□□□□□ -0.32
PUM3-203ENST00000469168 AKT1S1Q96B36 256 aa13.01□□□□□ -0.33
PUM3-203ENST00000469168 ZNF692Q9BU19 519 aaPredicted RBP13.01□□□□□ -0.33
PUM3-203ENST00000469168 REM2Q8IYK8 340 aaPredicted RBP12.92□□□□□ -0.34
PUM3-203ENST00000469168 SSUH2Q9Y2M2 353 aa12.89□□□□□ -0.35
PUM3-203ENST00000469168 SPDYE4A6NLX3 237 aa12.85□□□□□ -0.35
PUM3-203ENST00000469168 PABPN1Q86U42 306 aaKnown RBP eCLIP12.82□□□□□ -0.36
PUM3-203ENST00000469168 CHRDL2Q6WN34 429 aa12.8□□□□□ -0.36
PUM3-203ENST00000469168 PITPNM1O00562 1244 aa12.78□□□□□ -0.36
PUM3-203ENST00000469168 CLEC11AQ9Y240 323 aa12.75□□□□□ -0.37
PUM3-203ENST00000469168 SPDYE1Q8NFV5 336 aaPredicted RBP12.72□□□□□ -0.37
PUM3-203ENST00000469168 FKBP8Q14318 412 aa12.67□□□□□ -0.38
PUM3-203ENST00000469168 POTEHQ6S545 545 aa12.67□□□□□ -0.38
PUM3-203ENST00000469168 PIP4P2Q8N4L2 257 aa12.58□□□□□ -0.4
PUM3-203ENST00000469168 PRR29P0C7W0 189 aa12.56□□□□□ -0.4
PUM3-203ENST00000469168 FXR2P51116 673 aaKnown RBP eCLIP12.55□□□□□ -0.4
PUM3-203ENST00000469168 PROM2Q8N271 834 aa12.52□□□□□ -0.41
PUM3-203ENST00000469168 STAG3Q9UJ98 1225 aa12.51□□□□□ -0.41
PUM3-203ENST00000469168 PRKAR2AP13861 404 aaKnown RBP12.48□□□□□ -0.41
PUM3-203ENST00000469168 CHADLQ6NUI6 762 aa12.46□□□□□ -0.41
PUM3-203ENST00000469168 CREBZFQ9NS37 354 aa12.32□□□□□ -0.44
PUM3-203ENST00000469168 HAX1O00165 279 aa12.3□□□□□ -0.44
PUM3-203ENST00000469168 FARP1Q9Y4F1 1045 aaPredicted RBP12.27□□□□□ -0.45
PUM3-203ENST00000469168 MIER1Q8N108 512 aa12.26□□□□□ -0.45
PUM3-203ENST00000469168 FBXO3Q9UK99 471 aa12.22□□□□□ -0.45
PUM3-203ENST00000469168 PLCD3Q8N3E9 789 aa12.2□□□□□ -0.46
PUM3-203ENST00000469168 PLEKHG5O94827 1062 aa12.17□□□□□ -0.46
PUM3-203ENST00000469168 EVX2Q03828 476 aa12.16□□□□□ -0.46
PUM3-203ENST00000469168 MNX1P50219 401 aaPredicted RBP12.14□□□□□ -0.47
PUM3-203ENST00000469168 C19orf67A6NJJ6 358 aa12.13□□□□□ -0.47
PUM3-203ENST00000469168 NPM1P06748 294 aaKnown RBP eCLIP12.11□□□□□ -0.47
PUM3-203ENST00000469168 CD44P16070 742 aaKnown RBP12.1□□□□□ -0.47
PUM3-203ENST00000469168 VASPP50552 380 aaPredicted RBP12.08□□□□□ -0.48
PUM3-203ENST00000469168 SP7Q8TDD2 431 aaPredicted RBP12.06□□□□□ -0.48
PUM3-203ENST00000469168 ZRANB1Q9UGI0 708 aa12.02□□□□□ -0.49
PUM3-203ENST00000469168 KLHL34Q8N239 644 aa12.01□□□□□ -0.49
PUM3-203ENST00000469168 ZBTB47Q9UFB7 747 aaPredicted RBP12.01□□□□□ -0.49
PUM3-203ENST00000469168 RTN4Q9NQC3 1192 aaKnown RBP11.99□□□□□ -0.49
PUM3-203ENST00000469168 PAK3O75914 559 aaPredicted RBP11.98□□□□□ -0.49
PUM3-203ENST00000469168 TSPYL2Q9H2G4 693 aaPredicted RBP11.98□□□□□ -0.49
PUM3-203ENST00000469168 RASEFQ8IZ41 740 aa11.94□□□□□ -0.5
PUM3-203ENST00000469168 IFNLR1Q8IU57 520 aaPredicted RBP11.91□□□□□ -0.5
PUM3-203ENST00000469168 NUBP1P53384 320 aa11.9□□□□□ -0.5
PUM3-203ENST00000469168 GABBR2O75899 941 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms