RNA–Protein interactions for RNA: ENST00000469034.1

SUMO1-210, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-210ENST00000469034 AEBP2Q6ZN18 517 aaPredicted RBP26.65■■□□□ 1.86
SUMO1-210ENST00000469034 CHIC1Q5VXU3 224 aa25.08■■□□□ 1.61
SUMO1-210ENST00000469034 SENP3Q9H4L4 574 aaPredicted RBP22.78■■□□□ 1.24
SUMO1-210ENST00000469034 PHF23Q9BUL5 403 aaPredicted RBP22.46■■□□□ 1.19
SUMO1-210ENST00000469034 FOXD1Q16676 465 aa21.27■■□□□ 1
SUMO1-210ENST00000469034 MSH5O43196 834 aa20■□□□□ 0.79
SUMO1-210ENST00000469034 PLPPR3Q6T4P5 718 aa19.95■□□□□ 0.78
SUMO1-210ENST00000469034 POTEDQ86YR6 584 aa19.93■□□□□ 0.78
SUMO1-210ENST00000469034 PIAS4Q8N2W9 510 aaPredicted RBP19.84■□□□□ 0.77
SUMO1-210ENST00000469034 PPP6R1Q9UPN7 881 aa19.7■□□□□ 0.74
SUMO1-210ENST00000469034 ADRA2BP18089 450 aa19.64■□□□□ 0.73
SUMO1-210ENST00000469034 MAPK8IP2Q13387 824 aaPredicted RBP18.11■□□□□ 0.49
SUMO1-210ENST00000469034 DMRT2Q9Y5R5 561 aa18.02■□□□□ 0.48
SUMO1-210ENST00000469034 SCAF1Q9H7N4 1312 aaKnown RBP17.98■□□□□ 0.47
SUMO1-210ENST00000469034 PPP4R3CPQ6ZMV5 832 aa17.46■□□□□ 0.39
SUMO1-210ENST00000469034 DCAF8L1A6NGE4 600 aa17.36■□□□□ 0.37
SUMO1-210ENST00000469034 CACNB1Q02641 598 aaPredicted RBP17.33■□□□□ 0.36
SUMO1-210ENST00000469034 HOXD11P31277 338 aaPredicted RBP17.26■□□□□ 0.35
SUMO1-210ENST00000469034 CNKSR2Q8WXI2 1034 aa17.18■□□□□ 0.34
SUMO1-210ENST00000469034 RNF216Q9NWF9 866 aaPredicted RBP17.08■□□□□ 0.32
SUMO1-210ENST00000469034 RNF39Q9H2S5 420 aa17.03■□□□□ 0.32
SUMO1-210ENST00000469034 C1QBPQ07021 282 aaKnown RBP16.77■□□□□ 0.28
SUMO1-210ENST00000469034 NCBP3Q53F19 620 aaKnown RBP16.72■□□□□ 0.27
SUMO1-210ENST00000469034 DNAJC5BQ9UF47 199 aa16.69■□□□□ 0.26
SUMO1-210ENST00000469034 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.49■□□□□ 0.23
SUMO1-210ENST00000469034 NPM3O75607 178 aaKnown RBP16.47■□□□□ 0.23
SUMO1-210ENST00000469034 U3KPZ7 1027 aaPredicted RBP16.09■□□□□ 0.17
SUMO1-210ENST00000469034 CAPN15O75808 1086 aa15.95■□□□□ 0.14
SUMO1-210ENST00000469034 KCNA4P22459 653 aa15.94■□□□□ 0.14
SUMO1-210ENST00000469034 SPINK5Q9NQ38 1064 aaPredicted RBP15.94■□□□□ 0.14
SUMO1-210ENST00000469034 DSG3P32926 999 aa15.88■□□□□ 0.13
SUMO1-210ENST00000469034 SLC4A2P04920 1241 aa15.78■□□□□ 0.12
SUMO1-210ENST00000469034 TRHP20396 242 aaPredicted RBP15.64■□□□□ 0.09
SUMO1-210ENST00000469034 APLP2Q06481 763 aa15.64■□□□□ 0.09
SUMO1-210ENST00000469034 POTEHQ6S545 545 aa15.58■□□□□ 0.08
SUMO1-210ENST00000469034 ZNF219Q9P2Y4 722 aaPredicted RBP15.58■□□□□ 0.08
SUMO1-210ENST00000469034 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.56■□□□□ 0.08
SUMO1-210ENST00000469034 ABCB7O75027 752 aa15.56■□□□□ 0.08
SUMO1-210ENST00000469034 HNRNPUL2Q1KMD3 747 aaKnown RBP15.56■□□□□ 0.08
SUMO1-210ENST00000469034 SAMD1Q6SPF0 538 aaPredicted RBP15.45■□□□□ 0.06
SUMO1-210ENST00000469034 MYCNP04198 464 aaPredicted RBP15.24■□□□□ 0.03
SUMO1-210ENST00000469034 RBM42Q9BTD8 480 aaKnown RBP15.17■□□□□ 0.02
SUMO1-210ENST00000469034 POLA2Q14181 598 aa15.15■□□□□ 0.02
SUMO1-210ENST00000469034 SLC4A1APQ9BWU0 796 aaKnown RBP15.01□□□□□ -0.01
SUMO1-210ENST00000469034 FOXD4L1Q9NU39 408 aa14.95□□□□□ -0.02
SUMO1-210ENST00000469034 CHRDL2Q6WN34 429 aa14.93□□□□□ -0.02
SUMO1-210ENST00000469034 ATF5Q9Y2D1 282 aaPredicted RBP14.91□□□□□ -0.02
SUMO1-210ENST00000469034 ZBTB12Q9Y330 459 aaPredicted RBP14.8□□□□□ -0.04
SUMO1-210ENST00000469034 AKT1S1Q96B36 256 aa14.76□□□□□ -0.05
SUMO1-210ENST00000469034 OSCARQ8IYS5 282 aa14.67□□□□□ -0.06
SUMO1-210ENST00000469034 ZBTB22O15209 634 aa14.64□□□□□ -0.07
SUMO1-210ENST00000469034 REM2Q8IYK8 340 aaPredicted RBP14.62□□□□□ -0.07
SUMO1-210ENST00000469034 PIP4P2Q8N4L2 257 aa14.52□□□□□ -0.09
SUMO1-210ENST00000469034 ATXN8OSP0DMR3 200 aa14.5□□□□□ -0.09
SUMO1-210ENST00000469034 SP7Q8TDD2 431 aaPredicted RBP14.49□□□□□ -0.09
SUMO1-210ENST00000469034 PITPNM1O00562 1244 aa14.48□□□□□ -0.09
SUMO1-210ENST00000469034 FXR2P51116 673 aaKnown RBP eCLIP14.38□□□□□ -0.11
SUMO1-210ENST00000469034 FBLN2P98095 1184 aa14.36□□□□□ -0.11
SUMO1-210ENST00000469034 HAX1O00165 279 aa14.35□□□□□ -0.11
SUMO1-210ENST00000469034 SPDYE2BA6NHP3 402 aa14.32□□□□□ -0.12
SUMO1-210ENST00000469034 SPDYE6P0CI01 402 aa14.32□□□□□ -0.12
SUMO1-210ENST00000469034 SPDYE2Q495Y8 402 aa14.32□□□□□ -0.12
SUMO1-210ENST00000469034 MKRN4PQ13434 485 aaPredicted RBP14.2□□□□□ -0.14
SUMO1-210ENST00000469034 CLEC11AQ9Y240 323 aa14.17□□□□□ -0.14
SUMO1-210ENST00000469034 ZNF692Q9BU19 519 aaPredicted RBP14.15□□□□□ -0.14
SUMO1-210ENST00000469034 SPDYE1Q8NFV5 336 aaPredicted RBP14.14□□□□□ -0.15
SUMO1-210ENST00000469034 EVX2Q03828 476 aa14.13□□□□□ -0.15
SUMO1-210ENST00000469034 PRKAR2AP13861 404 aaKnown RBP14.11□□□□□ -0.15
SUMO1-210ENST00000469034 SSUH2Q9Y2M2 353 aa14.09□□□□□ -0.15
SUMO1-210ENST00000469034 C19orf67A6NJJ6 358 aa13.93□□□□□ -0.18
SUMO1-210ENST00000469034 PABPN1Q86U42 306 aaKnown RBP eCLIP13.92□□□□□ -0.18
SUMO1-210ENST00000469034 CHADLQ6NUI6 762 aa13.91□□□□□ -0.18
SUMO1-210ENST00000469034 PRR29P0C7W0 189 aa13.89□□□□□ -0.19
SUMO1-210ENST00000469034 GABBR2O75899 941 aa13.8□□□□□ -0.2
SUMO1-210ENST00000469034 CSRNP3Q8WYN3 585 aa13.76□□□□□ -0.21
SUMO1-210ENST00000469034 FARP1Q9Y4F1 1045 aaPredicted RBP13.66□□□□□ -0.22
SUMO1-210ENST00000469034 CD44P16070 742 aaKnown RBP13.65□□□□□ -0.22
SUMO1-210ENST00000469034 LHX8Q68G74 356 aa13.6□□□□□ -0.23
SUMO1-210ENST00000469034 POTEIP0CG38 1075 aa13.49□□□□□ -0.25
SUMO1-210ENST00000469034 CLCN6P51797 869 aa13.49□□□□□ -0.25
SUMO1-210ENST00000469034 EHMT2Q96KQ7 1210 aa13.48□□□□□ -0.25
SUMO1-210ENST00000469034 STAG3Q9UJ98 1225 aa13.48□□□□□ -0.25
SUMO1-210ENST00000469034 CREBZFQ9NS37 354 aa13.46□□□□□ -0.25
SUMO1-210ENST00000469034 SPDYE4A6NLX3 237 aa13.43□□□□□ -0.26
SUMO1-210ENST00000469034 ZRANB1Q9UGI0 708 aa13.43□□□□□ -0.26
SUMO1-210ENST00000469034 ZNF579Q8NAF0 562 aaKnown RBP13.4□□□□□ -0.26
SUMO1-210ENST00000469034 DCBLD2Q96PD2 775 aa13.4□□□□□ -0.26
SUMO1-210ENST00000469034 GALR2O43603 387 aaPredicted RBP13.28□□□□□ -0.28
SUMO1-210ENST00000469034 PAK3O75914 559 aaPredicted RBP13.27□□□□□ -0.29
SUMO1-210ENST00000469034 NPM1P06748 294 aaKnown RBP eCLIP13.22□□□□□ -0.29
SUMO1-210ENST00000469034 PHF12Q96QT6 1004 aa13.21□□□□□ -0.29
SUMO1-210ENST00000469034 MNX1P50219 401 aaPredicted RBP13.18□□□□□ -0.3
SUMO1-210ENST00000469034 POTEB2H3BUK9 544 aa13.05□□□□□ -0.32
SUMO1-210ENST00000469034 OTUD5Q96G74 571 aa13.05□□□□□ -0.32
SUMO1-210ENST00000469034 PELP1Q8IZL8 1130 aaKnown RBP13.03□□□□□ -0.32
SUMO1-210ENST00000469034 PROM2Q8N271 834 aa13.02□□□□□ -0.33
SUMO1-210ENST00000469034 MS4A3Q96HJ5 214 aa13.02□□□□□ -0.33
SUMO1-210ENST00000469034 TSPYL2Q9H2G4 693 aaPredicted RBP12.99□□□□□ -0.33
SUMO1-210ENST00000469034 ASTLQ6HA08 431 aaPredicted RBP12.97□□□□□ -0.33
SUMO1-210ENST00000469034 PLSCR2Q9NRY7 297 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms