RNA–Protein interactions for RNA: ENST00000468976.5

MCF2L2-207, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 4

Gene MCF2L2, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-207ENST00000468976 AEBP2Q6ZN18 517 aaPredicted RBP27.35■■□□□ 1.97
MCF2L2-207ENST00000468976 CHIC1Q5VXU3 224 aa26.32■■□□□ 1.8
MCF2L2-207ENST00000468976 SENP3Q9H4L4 574 aaPredicted RBP23.31■■□□□ 1.32
MCF2L2-207ENST00000468976 PHF23Q9BUL5 403 aaPredicted RBP23.08■■□□□ 1.29
MCF2L2-207ENST00000468976 FOXD1Q16676 465 aa21.68■■□□□ 1.06
MCF2L2-207ENST00000468976 PLPPR3Q6T4P5 718 aa21.2■□□□□ 0.98
MCF2L2-207ENST00000468976 PPP6R1Q9UPN7 881 aa20.52■□□□□ 0.88
MCF2L2-207ENST00000468976 ADRA2BP18089 450 aa20.48■□□□□ 0.87
MCF2L2-207ENST00000468976 PIAS4Q8N2W9 510 aaPredicted RBP20.34■□□□□ 0.85
MCF2L2-207ENST00000468976 MSH5O43196 834 aa20.17■□□□□ 0.82
MCF2L2-207ENST00000468976 POTEDQ86YR6 584 aa19.1■□□□□ 0.65
MCF2L2-207ENST00000468976 SCAF1Q9H7N4 1312 aaKnown RBP18.79■□□□□ 0.6
MCF2L2-207ENST00000468976 MAPK8IP2Q13387 824 aaPredicted RBP18.71■□□□□ 0.59
MCF2L2-207ENST00000468976 PPP4R3CPQ6ZMV5 832 aa18.62■□□□□ 0.57
MCF2L2-207ENST00000468976 DMRT2Q9Y5R5 561 aa18.53■□□□□ 0.56
MCF2L2-207ENST00000468976 CNKSR2Q8WXI2 1034 aa18.2■□□□□ 0.5
MCF2L2-207ENST00000468976 NCBP3Q53F19 620 aaKnown RBP18.03■□□□□ 0.48
MCF2L2-207ENST00000468976 HOXD11P31277 338 aaPredicted RBP17.98■□□□□ 0.47
MCF2L2-207ENST00000468976 RNF216Q9NWF9 866 aaPredicted RBP17.95■□□□□ 0.46
MCF2L2-207ENST00000468976 DCAF8L1A6NGE4 600 aa17.77■□□□□ 0.44
MCF2L2-207ENST00000468976 NPM3O75607 178 aaKnown RBP17.73■□□□□ 0.43
MCF2L2-207ENST00000468976 KCNA4P22459 653 aa17.68■□□□□ 0.42
MCF2L2-207ENST00000468976 DNAJC5BQ9UF47 199 aa17.31■□□□□ 0.36
MCF2L2-207ENST00000468976 RNF39Q9H2S5 420 aa17.24■□□□□ 0.35
MCF2L2-207ENST00000468976 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.16■□□□□ 0.34
MCF2L2-207ENST00000468976 CACNB1Q02641 598 aaPredicted RBP17.12■□□□□ 0.33
MCF2L2-207ENST00000468976 C1QBPQ07021 282 aaKnown RBP17.02■□□□□ 0.32
MCF2L2-207ENST00000468976 SLC4A2P04920 1241 aa16.84■□□□□ 0.29
MCF2L2-207ENST00000468976 U3KPZ7 1027 aaPredicted RBP16.8■□□□□ 0.28
MCF2L2-207ENST00000468976 SLC4A1APQ9BWU0 796 aaKnown RBP16.78■□□□□ 0.28
MCF2L2-207ENST00000468976 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.49■□□□□ 0.23
MCF2L2-207ENST00000468976 HNRNPUL2Q1KMD3 747 aaKnown RBP16.49■□□□□ 0.23
MCF2L2-207ENST00000468976 SPINK5Q9NQ38 1064 aaPredicted RBP16.46■□□□□ 0.23
MCF2L2-207ENST00000468976 CAPN15O75808 1086 aa16.44■□□□□ 0.22
MCF2L2-207ENST00000468976 APLP2Q06481 763 aa16.41■□□□□ 0.22
MCF2L2-207ENST00000468976 MYCNP04198 464 aaPredicted RBP16.4■□□□□ 0.22
MCF2L2-207ENST00000468976 SAMD1Q6SPF0 538 aaPredicted RBP16.4■□□□□ 0.22
MCF2L2-207ENST00000468976 FOXD4L1Q9NU39 408 aa16.4■□□□□ 0.22
MCF2L2-207ENST00000468976 ZBTB22O15209 634 aa16.25■□□□□ 0.19
MCF2L2-207ENST00000468976 TRHP20396 242 aaPredicted RBP16.25■□□□□ 0.19
MCF2L2-207ENST00000468976 DSG3P32926 999 aa16.25■□□□□ 0.19
MCF2L2-207ENST00000468976 ZNF219Q9P2Y4 722 aaPredicted RBP16.24■□□□□ 0.19
MCF2L2-207ENST00000468976 ABCB7O75027 752 aa16.06■□□□□ 0.16
MCF2L2-207ENST00000468976 ATF5Q9Y2D1 282 aaPredicted RBP15.98■□□□□ 0.15
MCF2L2-207ENST00000468976 POLA2Q14181 598 aa15.9■□□□□ 0.14
MCF2L2-207ENST00000468976 ATXN8OSP0DMR3 200 aa15.89■□□□□ 0.13
MCF2L2-207ENST00000468976 CSRNP3Q8WYN3 585 aa15.82■□□□□ 0.12
MCF2L2-207ENST00000468976 EHMT2Q96KQ7 1210 aa15.79■□□□□ 0.12
MCF2L2-207ENST00000468976 ZBTB12Q9Y330 459 aaPredicted RBP15.62■□□□□ 0.09
MCF2L2-207ENST00000468976 RBM42Q9BTD8 480 aaKnown RBP15.52■□□□□ 0.08
MCF2L2-207ENST00000468976 FBLN2P98095 1184 aa15.37■□□□□ 0.05
MCF2L2-207ENST00000468976 OSCARQ8IYS5 282 aa15.35■□□□□ 0.05
MCF2L2-207ENST00000468976 MKRN4PQ13434 485 aaPredicted RBP15.26■□□□□ 0.03
MCF2L2-207ENST00000468976 AKT1S1Q96B36 256 aa15.23■□□□□ 0.03
MCF2L2-207ENST00000468976 SPDYE2BA6NHP3 402 aa15.15■□□□□ 0.02
MCF2L2-207ENST00000468976 SPDYE6P0CI01 402 aa15.15■□□□□ 0.02
MCF2L2-207ENST00000468976 SPDYE2Q495Y8 402 aa15.15■□□□□ 0.02
MCF2L2-207ENST00000468976 REM2Q8IYK8 340 aaPredicted RBP15.08■□□□□ 0
MCF2L2-207ENST00000468976 POTEHQ6S545 545 aa15.05■□□□□ -0
MCF2L2-207ENST00000468976 CHRDL2Q6WN34 429 aa15.04■□□□□ -0
MCF2L2-207ENST00000468976 ZNF692Q9BU19 519 aaPredicted RBP15.03■□□□□ -0
MCF2L2-207ENST00000468976 SSUH2Q9Y2M2 353 aa14.97□□□□□ -0.01
MCF2L2-207ENST00000468976 PITPNM1O00562 1244 aa14.9□□□□□ -0.02
MCF2L2-207ENST00000468976 PABPN1Q86U42 306 aaKnown RBP eCLIP14.81□□□□□ -0.04
MCF2L2-207ENST00000468976 SPDYE1Q8NFV5 336 aaPredicted RBP14.8□□□□□ -0.04
MCF2L2-207ENST00000468976 CLEC11AQ9Y240 323 aa14.76□□□□□ -0.05
MCF2L2-207ENST00000468976 PIP4P2Q8N4L2 257 aa14.75□□□□□ -0.05
MCF2L2-207ENST00000468976 SPDYE4A6NLX3 237 aa14.74□□□□□ -0.05
MCF2L2-207ENST00000468976 FXR2P51116 673 aaKnown RBP eCLIP14.71□□□□□ -0.05
MCF2L2-207ENST00000468976 PRR29P0C7W0 189 aa14.58□□□□□ -0.08
MCF2L2-207ENST00000468976 PRKAR2AP13861 404 aaKnown RBP14.53□□□□□ -0.08
MCF2L2-207ENST00000468976 STAG3Q9UJ98 1225 aa14.5□□□□□ -0.09
MCF2L2-207ENST00000468976 CHADLQ6NUI6 762 aa14.42□□□□□ -0.1
MCF2L2-207ENST00000468976 HAX1O00165 279 aa14.41□□□□□ -0.1
MCF2L2-207ENST00000468976 PROM2Q8N271 834 aa14.41□□□□□ -0.1
MCF2L2-207ENST00000468976 FKBP8Q14318 412 aa14.33□□□□□ -0.12
MCF2L2-207ENST00000468976 CREBZFQ9NS37 354 aa14.27□□□□□ -0.13
MCF2L2-207ENST00000468976 FARP1Q9Y4F1 1045 aaPredicted RBP14.27□□□□□ -0.13
MCF2L2-207ENST00000468976 SP7Q8TDD2 431 aaPredicted RBP14.26□□□□□ -0.13
MCF2L2-207ENST00000468976 C19orf67A6NJJ6 358 aa14.23□□□□□ -0.13
MCF2L2-207ENST00000468976 EVX2Q03828 476 aa14.22□□□□□ -0.13
MCF2L2-207ENST00000468976 CD44P16070 742 aaKnown RBP14.09□□□□□ -0.15
MCF2L2-207ENST00000468976 MNX1P50219 401 aaPredicted RBP14.06□□□□□ -0.16
MCF2L2-207ENST00000468976 NPM1P06748 294 aaKnown RBP eCLIP14.05□□□□□ -0.16
MCF2L2-207ENST00000468976 MIER1Q8N108 512 aa14.04□□□□□ -0.16
MCF2L2-207ENST00000468976 PLEKHG5O94827 1062 aa14.01□□□□□ -0.17
MCF2L2-207ENST00000468976 PLCD3Q8N3E9 789 aa13.97□□□□□ -0.17
MCF2L2-207ENST00000468976 FBXO3Q9UK99 471 aa13.97□□□□□ -0.17
MCF2L2-207ENST00000468976 ZRANB1Q9UGI0 708 aa13.95□□□□□ -0.18
MCF2L2-207ENST00000468976 GABBR2O75899 941 aa13.94□□□□□ -0.18
MCF2L2-207ENST00000468976 PAK3O75914 559 aaPredicted RBP13.92□□□□□ -0.18
MCF2L2-207ENST00000468976 ZNF579Q8NAF0 562 aaKnown RBP13.88□□□□□ -0.19
MCF2L2-207ENST00000468976 CLCN6P51797 869 aa13.87□□□□□ -0.19
MCF2L2-207ENST00000468976 ZBTB47Q9UFB7 747 aaPredicted RBP13.84□□□□□ -0.19
MCF2L2-207ENST00000468976 TSPYL2Q9H2G4 693 aaPredicted RBP13.79□□□□□ -0.2
MCF2L2-207ENST00000468976 VASPP50552 380 aaPredicted RBP13.76□□□□□ -0.21
MCF2L2-207ENST00000468976 PHF12Q96QT6 1004 aa13.76□□□□□ -0.21
MCF2L2-207ENST00000468976 RASEFQ8IZ41 740 aa13.74□□□□□ -0.21
MCF2L2-207ENST00000468976 NUBP1P53384 320 aa13.7□□□□□ -0.22
MCF2L2-207ENST00000468976 CCDC61Q9Y6R9 512 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms