RNA–Protein interactions for RNA: ENST00000468651.1

CCDC30-205, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-205ENST00000468651 AEBP2Q6ZN18 517 aaPredicted RBP24.3■■□□□ 1.48
CCDC30-205ENST00000468651 CHIC1Q5VXU3 224 aa23.77■■□□□ 1.4
CCDC30-205ENST00000468651 PHF23Q9BUL5 403 aaPredicted RBP20.85■□□□□ 0.93
CCDC30-205ENST00000468651 SENP3Q9H4L4 574 aaPredicted RBP20.83■□□□□ 0.93
CCDC30-205ENST00000468651 FOXD1Q16676 465 aa19.5■□□□□ 0.71
CCDC30-205ENST00000468651 PLPPR3Q6T4P5 718 aa19.36■□□□□ 0.69
CCDC30-205ENST00000468651 POTEDQ86YR6 584 aa19.3■□□□□ 0.68
CCDC30-205ENST00000468651 MSH5O43196 834 aa18.54■□□□□ 0.56
CCDC30-205ENST00000468651 ADRA2BP18089 450 aa18.47■□□□□ 0.55
CCDC30-205ENST00000468651 PPP6R1Q9UPN7 881 aa18.42■□□□□ 0.54
CCDC30-205ENST00000468651 PIAS4Q8N2W9 510 aaPredicted RBP18.18■□□□□ 0.5
CCDC30-205ENST00000468651 PPP4R3CPQ6ZMV5 832 aa17.04■□□□□ 0.32
CCDC30-205ENST00000468651 SCAF1Q9H7N4 1312 aaKnown RBP16.99■□□□□ 0.31
CCDC30-205ENST00000468651 MAPK8IP2Q13387 824 aaPredicted RBP16.74■□□□□ 0.27
CCDC30-205ENST00000468651 NCBP3Q53F19 620 aaKnown RBP16.67■□□□□ 0.26
CCDC30-205ENST00000468651 KCNA4P22459 653 aa16.6■□□□□ 0.25
CCDC30-205ENST00000468651 CNKSR2Q8WXI2 1034 aa16.58■□□□□ 0.24
CCDC30-205ENST00000468651 DMRT2Q9Y5R5 561 aa16.5■□□□□ 0.23
CCDC30-205ENST00000468651 CACNB1Q02641 598 aaPredicted RBP16.35■□□□□ 0.21
CCDC30-205ENST00000468651 NPM3O75607 178 aaKnown RBP16.32■□□□□ 0.2
CCDC30-205ENST00000468651 RNF216Q9NWF9 866 aaPredicted RBP16.24■□□□□ 0.19
CCDC30-205ENST00000468651 HOXD11P31277 338 aaPredicted RBP16.13■□□□□ 0.17
CCDC30-205ENST00000468651 DCAF8L1A6NGE4 600 aa15.97■□□□□ 0.15
CCDC30-205ENST00000468651 SLC4A1APQ9BWU0 796 aaKnown RBP15.87■□□□□ 0.13
CCDC30-205ENST00000468651 RNF39Q9H2S5 420 aa15.74■□□□□ 0.11
CCDC30-205ENST00000468651 DNAJC5BQ9UF47 199 aa15.74■□□□□ 0.11
CCDC30-205ENST00000468651 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.51■□□□□ 0.07
CCDC30-205ENST00000468651 C1QBPQ07021 282 aaKnown RBP15.48■□□□□ 0.07
CCDC30-205ENST00000468651 EHMT2Q96KQ7 1210 aa15.44■□□□□ 0.06
CCDC30-205ENST00000468651 SLC4A2P04920 1241 aa15.37■□□□□ 0.05
CCDC30-205ENST00000468651 FOXD4L1Q9NU39 408 aa15.32■□□□□ 0.04
CCDC30-205ENST00000468651 ZBTB22O15209 634 aa15.21■□□□□ 0.03
CCDC30-205ENST00000468651 CSRNP3Q8WYN3 585 aa15.15■□□□□ 0.02
CCDC30-205ENST00000468651 U3KPZ7 1027 aaPredicted RBP15.15■□□□□ 0.02
CCDC30-205ENST00000468651 MYCNP04198 464 aaPredicted RBP15.13■□□□□ 0.01
CCDC30-205ENST00000468651 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.06■□□□□ 0
CCDC30-205ENST00000468651 HNRNPUL2Q1KMD3 747 aaKnown RBP15.06■□□□□ 0
CCDC30-205ENST00000468651 POTEHQ6S545 545 aa14.99□□□□□ -0.01
CCDC30-205ENST00000468651 SAMD1Q6SPF0 538 aaPredicted RBP14.97□□□□□ -0.01
CCDC30-205ENST00000468651 APLP2Q06481 763 aa14.94□□□□□ -0.02
CCDC30-205ENST00000468651 CAPN15O75808 1086 aa14.8□□□□□ -0.04
CCDC30-205ENST00000468651 ATXN8OSP0DMR3 200 aa14.77□□□□□ -0.05
CCDC30-205ENST00000468651 SPINK5Q9NQ38 1064 aaPredicted RBP14.75□□□□□ -0.05
CCDC30-205ENST00000468651 TRHP20396 242 aaPredicted RBP14.71□□□□□ -0.05
CCDC30-205ENST00000468651 ZNF219Q9P2Y4 722 aaPredicted RBP14.68□□□□□ -0.06
CCDC30-205ENST00000468651 ATF5Q9Y2D1 282 aaPredicted RBP14.65□□□□□ -0.06
CCDC30-205ENST00000468651 DSG3P32926 999 aa14.51□□□□□ -0.09
CCDC30-205ENST00000468651 ABCB7O75027 752 aa14.47□□□□□ -0.09
CCDC30-205ENST00000468651 POLA2Q14181 598 aa14.43□□□□□ -0.1
CCDC30-205ENST00000468651 ZBTB12Q9Y330 459 aaPredicted RBP14.22□□□□□ -0.13
CCDC30-205ENST00000468651 FBLN2P98095 1184 aa14.19□□□□□ -0.14
CCDC30-205ENST00000468651 MKRN4PQ13434 485 aaPredicted RBP14□□□□□ -0.17
CCDC30-205ENST00000468651 OSCARQ8IYS5 282 aa13.92□□□□□ -0.18
CCDC30-205ENST00000468651 RBM42Q9BTD8 480 aaKnown RBP13.86□□□□□ -0.19
CCDC30-205ENST00000468651 CHRDL2Q6WN34 429 aa13.84□□□□□ -0.19
CCDC30-205ENST00000468651 FKBP8Q14318 412 aa13.8□□□□□ -0.2
CCDC30-205ENST00000468651 SPDYE2BA6NHP3 402 aa13.79□□□□□ -0.2
CCDC30-205ENST00000468651 SPDYE4A6NLX3 237 aa13.79□□□□□ -0.2
CCDC30-205ENST00000468651 SPDYE6P0CI01 402 aa13.79□□□□□ -0.2
CCDC30-205ENST00000468651 SPDYE2Q495Y8 402 aa13.79□□□□□ -0.2
CCDC30-205ENST00000468651 ZNF692Q9BU19 519 aaPredicted RBP13.78□□□□□ -0.2
CCDC30-205ENST00000468651 SP7Q8TDD2 431 aaPredicted RBP13.71□□□□□ -0.21
CCDC30-205ENST00000468651 AKT1S1Q96B36 256 aa13.63□□□□□ -0.23
CCDC30-205ENST00000468651 SSUH2Q9Y2M2 353 aa13.61□□□□□ -0.23
CCDC30-205ENST00000468651 PABPN1Q86U42 306 aaKnown RBP eCLIP13.58□□□□□ -0.24
CCDC30-205ENST00000468651 REM2Q8IYK8 340 aaPredicted RBP13.49□□□□□ -0.25
CCDC30-205ENST00000468651 SPDYE1Q8NFV5 336 aaPredicted RBP13.43□□□□□ -0.26
CCDC30-205ENST00000468651 CLEC11AQ9Y240 323 aa13.42□□□□□ -0.26
CCDC30-205ENST00000468651 PROM2Q8N271 834 aa13.41□□□□□ -0.26
CCDC30-205ENST00000468651 STAG3Q9UJ98 1225 aa13.38□□□□□ -0.27
CCDC30-205ENST00000468651 PIP4P2Q8N4L2 257 aa13.35□□□□□ -0.27
CCDC30-205ENST00000468651 FBXO3Q9UK99 471 aa13.34□□□□□ -0.27
CCDC30-205ENST00000468651 PITPNM1O00562 1244 aa13.33□□□□□ -0.28
CCDC30-205ENST00000468651 HAX1O00165 279 aa13.32□□□□□ -0.28
CCDC30-205ENST00000468651 PRR29P0C7W0 189 aa13.27□□□□□ -0.29
CCDC30-205ENST00000468651 FXR2P51116 673 aaKnown RBP eCLIP13.16□□□□□ -0.3
CCDC30-205ENST00000468651 PLEKHG5O94827 1062 aa13.14□□□□□ -0.31
CCDC30-205ENST00000468651 MIER1Q8N108 512 aa13.13□□□□□ -0.31
CCDC30-205ENST00000468651 PLCD3Q8N3E9 789 aa13.13□□□□□ -0.31
CCDC30-205ENST00000468651 VASPP50552 380 aaPredicted RBP13.1□□□□□ -0.31
CCDC30-205ENST00000468651 EVX2Q03828 476 aa13.09□□□□□ -0.31
CCDC30-205ENST00000468651 PRKAR2AP13861 404 aaKnown RBP13.03□□□□□ -0.32
CCDC30-205ENST00000468651 CHADLQ6NUI6 762 aa13.01□□□□□ -0.33
CCDC30-205ENST00000468651 KLHL34Q8N239 644 aa13□□□□□ -0.33
CCDC30-205ENST00000468651 CREBZFQ9NS37 354 aa12.99□□□□□ -0.33
CCDC30-205ENST00000468651 ZBTB47Q9UFB7 747 aaPredicted RBP12.97□□□□□ -0.33
CCDC30-205ENST00000468651 NPM1P06748 294 aaKnown RBP eCLIP12.89□□□□□ -0.35
CCDC30-205ENST00000468651 FARP1Q9Y4F1 1045 aaPredicted RBP12.89□□□□□ -0.35
CCDC30-205ENST00000468651 IFNLR1Q8IU57 520 aaPredicted RBP12.88□□□□□ -0.35
CCDC30-205ENST00000468651 LHX8Q68G74 356 aa12.86□□□□□ -0.35
CCDC30-205ENST00000468651 MNX1P50219 401 aaPredicted RBP12.8□□□□□ -0.36
CCDC30-205ENST00000468651 SPOCK2Q92563 424 aa12.8□□□□□ -0.36
CCDC30-205ENST00000468651 C19orf67A6NJJ6 358 aa12.77□□□□□ -0.37
CCDC30-205ENST00000468651 GABBR2O75899 941 aa12.77□□□□□ -0.37
CCDC30-205ENST00000468651 PAK3O75914 559 aaPredicted RBP12.72□□□□□ -0.37
CCDC30-205ENST00000468651 NUBP1P53384 320 aa12.68□□□□□ -0.38
CCDC30-205ENST00000468651 FAM212AQ96EL1 285 aa12.68□□□□□ -0.38
CCDC30-205ENST00000468651 CD44P16070 742 aaKnown RBP12.67□□□□□ -0.38
CCDC30-205ENST00000468651 DCAF8Q5TAQ9 597 aa12.67□□□□□ -0.38
CCDC30-205ENST00000468651 TSPYL2Q9H2G4 693 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms