RNA–Protein interactions for RNA: ENST00000468471.2

KCNMA1-217, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 3

Gene KCNMA1, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-217ENST00000468471 AEBP2Q6ZN18 517 aaPredicted RBP16.03■□□□□ 0.16
KCNMA1-217ENST00000468471 CHIC1Q5VXU3 224 aa15.1■□□□□ 0.01
KCNMA1-217ENST00000468471 SENP3Q9H4L4 574 aaPredicted RBP13.8□□□□□ -0.2
KCNMA1-217ENST00000468471 PHF23Q9BUL5 403 aaPredicted RBP13.56□□□□□ -0.24
KCNMA1-217ENST00000468471 FOXD1Q16676 465 aa12.84□□□□□ -0.35
KCNMA1-217ENST00000468471 POTEDQ86YR6 584 aa12.2□□□□□ -0.46
KCNMA1-217ENST00000468471 MSH5O43196 834 aa12.17□□□□□ -0.46
KCNMA1-217ENST00000468471 PIAS4Q8N2W9 510 aaPredicted RBP12.02□□□□□ -0.49
KCNMA1-217ENST00000468471 PLPPR3Q6T4P5 718 aa11.97□□□□□ -0.49
KCNMA1-217ENST00000468471 ADRA2BP18089 450 aa11.81□□□□□ -0.52
KCNMA1-217ENST00000468471 PPP6R1Q9UPN7 881 aa11.8□□□□□ -0.52
KCNMA1-217ENST00000468471 MAPK8IP2Q13387 824 aaPredicted RBP10.89□□□□□ -0.67
KCNMA1-217ENST00000468471 SCAF1Q9H7N4 1312 aaKnown RBP10.88□□□□□ -0.67
KCNMA1-217ENST00000468471 DMRT2Q9Y5R5 561 aa10.87□□□□□ -0.67
KCNMA1-217ENST00000468471 CACNB1Q02641 598 aaPredicted RBP10.61□□□□□ -0.71
KCNMA1-217ENST00000468471 DCAF8L1A6NGE4 600 aa10.58□□□□□ -0.72
KCNMA1-217ENST00000468471 PPP4R3CPQ6ZMV5 832 aa10.45□□□□□ -0.74
KCNMA1-217ENST00000468471 HOXD11P31277 338 aaPredicted RBP10.36□□□□□ -0.75
KCNMA1-217ENST00000468471 CNKSR2Q8WXI2 1034 aa10.32□□□□□ -0.76
KCNMA1-217ENST00000468471 RNF39Q9H2S5 420 aa10.3□□□□□ -0.76
KCNMA1-217ENST00000468471 RNF216Q9NWF9 866 aaPredicted RBP10.26□□□□□ -0.77
KCNMA1-217ENST00000468471 C1QBPQ07021 282 aaKnown RBP10.18□□□□□ -0.78
KCNMA1-217ENST00000468471 NCBP3Q53F19 620 aaKnown RBP10.05□□□□□ -0.8
KCNMA1-217ENST00000468471 DNAJC5BQ9UF47 199 aa10.03□□□□□ -0.8
KCNMA1-217ENST00000468471 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.99□□□□□ -0.81
KCNMA1-217ENST00000468471 NPM3O75607 178 aaKnown RBP9.82□□□□□ -0.84
KCNMA1-217ENST00000468471 CAPN15O75808 1086 aa9.68□□□□□ -0.86
KCNMA1-217ENST00000468471 U3KPZ7 1027 aaPredicted RBP9.67□□□□□ -0.86
KCNMA1-217ENST00000468471 SPINK5Q9NQ38 1064 aaPredicted RBP9.6□□□□□ -0.87
KCNMA1-217ENST00000468471 DSG3P32926 999 aa9.58□□□□□ -0.88
KCNMA1-217ENST00000468471 POTEHQ6S545 545 aa9.55□□□□□ -0.88
KCNMA1-217ENST00000468471 APLP2Q06481 763 aa9.49□□□□□ -0.89
KCNMA1-217ENST00000468471 TRHP20396 242 aaPredicted RBP9.47□□□□□ -0.89
KCNMA1-217ENST00000468471 KCNA4P22459 653 aa9.44□□□□□ -0.9
KCNMA1-217ENST00000468471 ABCB7O75027 752 aa9.42□□□□□ -0.9
KCNMA1-217ENST00000468471 ZNF219Q9P2Y4 722 aaPredicted RBP9.42□□□□□ -0.9
KCNMA1-217ENST00000468471 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.4□□□□□ -0.9
KCNMA1-217ENST00000468471 SLC4A2P04920 1241 aa9.4□□□□□ -0.9
KCNMA1-217ENST00000468471 HNRNPUL2Q1KMD3 747 aaKnown RBP9.4□□□□□ -0.9
KCNMA1-217ENST00000468471 SAMD1Q6SPF0 538 aaPredicted RBP9.31□□□□□ -0.92
KCNMA1-217ENST00000468471 RBM42Q9BTD8 480 aaKnown RBP9.23□□□□□ -0.93
KCNMA1-217ENST00000468471 MYCNP04198 464 aaPredicted RBP9.13□□□□□ -0.95
KCNMA1-217ENST00000468471 POLA2Q14181 598 aa9.13□□□□□ -0.95
KCNMA1-217ENST00000468471 CHRDL2Q6WN34 429 aa9.08□□□□□ -0.96
KCNMA1-217ENST00000468471 ZBTB12Q9Y330 459 aaPredicted RBP8.96□□□□□ -0.98
KCNMA1-217ENST00000468471 AKT1S1Q96B36 256 aa8.93□□□□□ -0.98
KCNMA1-217ENST00000468471 SLC4A1APQ9BWU0 796 aaKnown RBP8.92□□□□□ -0.98
KCNMA1-217ENST00000468471 FOXD4L1Q9NU39 408 aa8.91□□□□□ -0.98
KCNMA1-217ENST00000468471 ATF5Q9Y2D1 282 aaPredicted RBP8.87□□□□□ -0.99
KCNMA1-217ENST00000468471 SP7Q8TDD2 431 aaPredicted RBP8.85□□□□□ -0.99
KCNMA1-217ENST00000468471 OSCARQ8IYS5 282 aa8.84□□□□□ -0.99
KCNMA1-217ENST00000468471 REM2Q8IYK8 340 aaPredicted RBP8.83□□□□□ -1
KCNMA1-217ENST00000468471 PIP4P2Q8N4L2 257 aa8.8□□□□□ -1
KCNMA1-217ENST00000468471 HAX1O00165 279 aa8.77□□□□□ -1.01
KCNMA1-217ENST00000468471 PITPNM1O00562 1244 aa8.75□□□□□ -1.01
KCNMA1-217ENST00000468471 FXR2P51116 673 aaKnown RBP eCLIP8.68□□□□□ -1.02
KCNMA1-217ENST00000468471 FBLN2P98095 1184 aa8.67□□□□□ -1.02
KCNMA1-217ENST00000468471 SPDYE2BA6NHP3 402 aa8.63□□□□□ -1.03
KCNMA1-217ENST00000468471 SPDYE6P0CI01 402 aa8.63□□□□□ -1.03
KCNMA1-217ENST00000468471 ATXN8OSP0DMR3 200 aa8.63□□□□□ -1.03
KCNMA1-217ENST00000468471 SPDYE2Q495Y8 402 aa8.63□□□□□ -1.03
KCNMA1-217ENST00000468471 ZBTB22O15209 634 aa8.62□□□□□ -1.03
KCNMA1-217ENST00000468471 CLEC11AQ9Y240 323 aa8.59□□□□□ -1.03
KCNMA1-217ENST00000468471 SPDYE1Q8NFV5 336 aaPredicted RBP8.56□□□□□ -1.04
KCNMA1-217ENST00000468471 PRKAR2AP13861 404 aaKnown RBP8.55□□□□□ -1.04
KCNMA1-217ENST00000468471 EVX2Q03828 476 aa8.52□□□□□ -1.05
KCNMA1-217ENST00000468471 ZNF692Q9BU19 519 aaPredicted RBP8.52□□□□□ -1.05
KCNMA1-217ENST00000468471 MKRN4PQ13434 485 aaPredicted RBP8.44□□□□□ -1.06
KCNMA1-217ENST00000468471 SSUH2Q9Y2M2 353 aa8.43□□□□□ -1.06
KCNMA1-217ENST00000468471 C19orf67A6NJJ6 358 aa8.42□□□□□ -1.06
KCNMA1-217ENST00000468471 PRR29P0C7W0 189 aa8.4□□□□□ -1.06
KCNMA1-217ENST00000468471 CHADLQ6NUI6 762 aa8.39□□□□□ -1.07
KCNMA1-217ENST00000468471 GABBR2O75899 941 aa8.37□□□□□ -1.07
KCNMA1-217ENST00000468471 PABPN1Q86U42 306 aaKnown RBP eCLIP8.37□□□□□ -1.07
KCNMA1-217ENST00000468471 LHX8Q68G74 356 aa8.31□□□□□ -1.08
KCNMA1-217ENST00000468471 CD44P16070 742 aaKnown RBP8.27□□□□□ -1.09
KCNMA1-217ENST00000468471 FARP1Q9Y4F1 1045 aaPredicted RBP8.24□□□□□ -1.09
KCNMA1-217ENST00000468471 DCBLD2Q96PD2 775 aa8.19□□□□□ -1.1
KCNMA1-217ENST00000468471 CLCN6P51797 869 aa8.18□□□□□ -1.1
KCNMA1-217ENST00000468471 POTEIP0CG38 1075 aa8.13□□□□□ -1.11
KCNMA1-217ENST00000468471 ZRANB1Q9UGI0 708 aa8.13□□□□□ -1.11
KCNMA1-217ENST00000468471 STAG3Q9UJ98 1225 aa8.11□□□□□ -1.11
KCNMA1-217ENST00000468471 ZNF579Q8NAF0 562 aaKnown RBP8.09□□□□□ -1.11
KCNMA1-217ENST00000468471 PAK3O75914 559 aaPredicted RBP8.08□□□□□ -1.12
KCNMA1-217ENST00000468471 CREBZFQ9NS37 354 aa8.06□□□□□ -1.12
KCNMA1-217ENST00000468471 CSRNP3Q8WYN3 585 aa8.04□□□□□ -1.12
KCNMA1-217ENST00000468471 PLSCR2Q9NRY7 297 aa8.04□□□□□ -1.12
KCNMA1-217ENST00000468471 SPDYE4A6NLX3 237 aa8.02□□□□□ -1.13
KCNMA1-217ENST00000468471 GALR2O43603 387 aaPredicted RBP8.01□□□□□ -1.13
KCNMA1-217ENST00000468471 NPM1P06748 294 aaKnown RBP eCLIP8□□□□□ -1.13
KCNMA1-217ENST00000468471 PHF12Q96QT6 1004 aa7.98□□□□□ -1.13
KCNMA1-217ENST00000468471 EHMT2Q96KQ7 1210 aa7.94□□□□□ -1.14
KCNMA1-217ENST00000468471 OTUD5Q96G74 571 aa7.91□□□□□ -1.14
KCNMA1-217ENST00000468471 POTEB2H3BUK9 544 aa7.86□□□□□ -1.15
KCNMA1-217ENST00000468471 MS4A3Q96HJ5 214 aa7.85□□□□□ -1.15
KCNMA1-217ENST00000468471 METRNQ9UJH8 293 aa7.85□□□□□ -1.15
KCNMA1-217ENST00000468471 POTEMA6NI47 508 aa7.84□□□□□ -1.15
KCNMA1-217ENST00000468471 MNX1P50219 401 aaPredicted RBP7.84□□□□□ -1.15
KCNMA1-217ENST00000468471 PELP1Q8IZL8 1130 aaKnown RBP7.84□□□□□ -1.15
KCNMA1-217ENST00000468471 SLC39A7Q92504 469 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms