RNA–Protein interactions for RNA: ENST00000468351.1

PHTF2-210, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 3

Gene PHTF2, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-210ENST00000468351 AEBP2Q6ZN18 517 aaPredicted RBP16.68■□□□□ 0.26
PHTF2-210ENST00000468351 CHIC1Q5VXU3 224 aa15.63■□□□□ 0.09
PHTF2-210ENST00000468351 SENP3Q9H4L4 574 aaPredicted RBP14.34□□□□□ -0.11
PHTF2-210ENST00000468351 PHF23Q9BUL5 403 aaPredicted RBP14.06□□□□□ -0.16
PHTF2-210ENST00000468351 FOXD1Q16676 465 aa13.37□□□□□ -0.27
PHTF2-210ENST00000468351 POTEDQ86YR6 584 aa12.98□□□□□ -0.33
PHTF2-210ENST00000468351 MSH5O43196 834 aa12.71□□□□□ -0.37
PHTF2-210ENST00000468351 PIAS4Q8N2W9 510 aaPredicted RBP12.41□□□□□ -0.42
PHTF2-210ENST00000468351 PLPPR3Q6T4P5 718 aa12.24□□□□□ -0.45
PHTF2-210ENST00000468351 PPP6R1Q9UPN7 881 aa12.18□□□□□ -0.46
PHTF2-210ENST00000468351 ADRA2BP18089 450 aa12.13□□□□□ -0.47
PHTF2-210ENST00000468351 DMRT2Q9Y5R5 561 aa11.3□□□□□ -0.6
PHTF2-210ENST00000468351 MAPK8IP2Q13387 824 aaPredicted RBP11.24□□□□□ -0.61
PHTF2-210ENST00000468351 SCAF1Q9H7N4 1312 aaKnown RBP11.18□□□□□ -0.62
PHTF2-210ENST00000468351 CACNB1Q02641 598 aaPredicted RBP11.09□□□□□ -0.63
PHTF2-210ENST00000468351 DCAF8L1A6NGE4 600 aa10.82□□□□□ -0.68
PHTF2-210ENST00000468351 RNF39Q9H2S5 420 aa10.79□□□□□ -0.68
PHTF2-210ENST00000468351 HOXD11P31277 338 aaPredicted RBP10.74□□□□□ -0.69
PHTF2-210ENST00000468351 PPP4R3CPQ6ZMV5 832 aa10.65□□□□□ -0.7
PHTF2-210ENST00000468351 C1QBPQ07021 282 aaKnown RBP10.62□□□□□ -0.71
PHTF2-210ENST00000468351 RNF216Q9NWF9 866 aaPredicted RBP10.58□□□□□ -0.72
PHTF2-210ENST00000468351 CNKSR2Q8WXI2 1034 aa10.56□□□□□ -0.72
PHTF2-210ENST00000468351 DNAJC5BQ9UF47 199 aa10.5□□□□□ -0.73
PHTF2-210ENST00000468351 NCBP3Q53F19 620 aaKnown RBP10.23□□□□□ -0.77
PHTF2-210ENST00000468351 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.22□□□□□ -0.773e-8■■■■□ 20.1
PHTF2-210ENST00000468351 POTEHQ6S545 545 aa10.11□□□□□ -0.79
PHTF2-210ENST00000468351 NPM3O75607 178 aaKnown RBP9.99□□□□□ -0.81
PHTF2-210ENST00000468351 DSG3P32926 999 aa9.97□□□□□ -0.81
PHTF2-210ENST00000468351 U3KPZ7 1027 aaPredicted RBP9.96□□□□□ -0.82
PHTF2-210ENST00000468351 CAPN15O75808 1086 aa9.92□□□□□ -0.82
PHTF2-210ENST00000468351 SPINK5Q9NQ38 1064 aaPredicted RBP9.91□□□□□ -0.82
PHTF2-210ENST00000468351 APLP2Q06481 763 aa9.81□□□□□ -0.84
PHTF2-210ENST00000468351 ZNF219Q9P2Y4 722 aaPredicted RBP9.69□□□□□ -0.86
PHTF2-210ENST00000468351 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.67□□□□□ -0.86
PHTF2-210ENST00000468351 HNRNPUL2Q1KMD3 747 aaKnown RBP9.67□□□□□ -0.86
PHTF2-210ENST00000468351 TRHP20396 242 aaPredicted RBP9.66□□□□□ -0.86
PHTF2-210ENST00000468351 ABCB7O75027 752 aa9.63□□□□□ -0.87
PHTF2-210ENST00000468351 SLC4A2P04920 1241 aa9.62□□□□□ -0.87
PHTF2-210ENST00000468351 RBM42Q9BTD8 480 aaKnown RBP9.56□□□□□ -0.88
PHTF2-210ENST00000468351 SAMD1Q6SPF0 538 aaPredicted RBP9.54□□□□□ -0.88
PHTF2-210ENST00000468351 CHRDL2Q6WN34 429 aa9.46□□□□□ -0.9
PHTF2-210ENST00000468351 KCNA4P22459 653 aa9.45□□□□□ -0.9
PHTF2-210ENST00000468351 POLA2Q14181 598 aa9.32□□□□□ -0.92
PHTF2-210ENST00000468351 SP7Q8TDD2 431 aaPredicted RBP9.31□□□□□ -0.92
PHTF2-210ENST00000468351 MYCNP04198 464 aaPredicted RBP9.28□□□□□ -0.92
PHTF2-210ENST00000468351 AKT1S1Q96B36 256 aa9.24□□□□□ -0.93
PHTF2-210ENST00000468351 ZBTB12Q9Y330 459 aaPredicted RBP9.23□□□□□ -0.93
PHTF2-210ENST00000468351 PIP4P2Q8N4L2 257 aa9.15□□□□□ -0.94
PHTF2-210ENST00000468351 REM2Q8IYK8 340 aaPredicted RBP9.14□□□□□ -0.95
PHTF2-210ENST00000468351 HAX1O00165 279 aa9.08□□□□□ -0.96
PHTF2-210ENST00000468351 OSCARQ8IYS5 282 aa9.05□□□□□ -0.96
PHTF2-210ENST00000468351 PITPNM1O00562 1244 aa9.04□□□□□ -0.96
PHTF2-210ENST00000468351 FXR2P51116 673 aaKnown RBP eCLIP9.04□□□□□ -0.96
PHTF2-210ENST00000468351 ATF5Q9Y2D1 282 aaPredicted RBP9.03□□□□□ -0.96
PHTF2-210ENST00000468351 FOXD4L1Q9NU39 408 aa8.98□□□□□ -0.97
PHTF2-210ENST00000468351 SLC4A1APQ9BWU0 796 aaKnown RBP8.92□□□□□ -0.98
PHTF2-210ENST00000468351 EVX2Q03828 476 aa8.9□□□□□ -0.98
PHTF2-210ENST00000468351 FBLN2P98095 1184 aa8.84□□□□□ -0.99
PHTF2-210ENST00000468351 SPDYE2BA6NHP3 402 aa8.83□□□□□ -1
PHTF2-210ENST00000468351 SPDYE6P0CI01 402 aa8.83□□□□□ -1
PHTF2-210ENST00000468351 SPDYE2Q495Y8 402 aa8.83□□□□□ -1
PHTF2-210ENST00000468351 PRKAR2AP13861 404 aaKnown RBP8.8□□□□□ -1
PHTF2-210ENST00000468351 C19orf67A6NJJ6 358 aa8.77□□□□□ -1.01
PHTF2-210ENST00000468351 SPDYE1Q8NFV5 336 aaPredicted RBP8.77□□□□□ -1.01
PHTF2-210ENST00000468351 ATXN8OSP0DMR3 200 aa8.76□□□□□ -1.01
PHTF2-210ENST00000468351 CLEC11AQ9Y240 323 aa8.75□□□□□ -1.01
PHTF2-210ENST00000468351 GABBR2O75899 941 aa8.71□□□□□ -1.02
PHTF2-210ENST00000468351 LHX8Q68G74 356 aa8.71□□□□□ -1.02
PHTF2-210ENST00000468351 ZBTB22O15209 634 aa8.67□□□□□ -1.02
PHTF2-210ENST00000468351 SSUH2Q9Y2M2 353 aa8.67□□□□□ -1.02
PHTF2-210ENST00000468351 ZNF692Q9BU19 519 aaPredicted RBP8.65□□□□□ -1.02
PHTF2-210ENST00000468351 MKRN4PQ13434 485 aaPredicted RBP8.61□□□□□ -1.03
PHTF2-210ENST00000468351 CHADLQ6NUI6 762 aa8.59□□□□□ -1.03
PHTF2-210ENST00000468351 PRR29P0C7W0 189 aa8.57□□□□□ -1.04
PHTF2-210ENST00000468351 CLCN6P51797 869 aa8.53□□□□□ -1.04
PHTF2-210ENST00000468351 POTEIP0CG38 1075 aa8.51□□□□□ -1.05
PHTF2-210ENST00000468351 CD44P16070 742 aaKnown RBP8.51□□□□□ -1.05
PHTF2-210ENST00000468351 PABPN1Q86U42 306 aaKnown RBP eCLIP8.5□□□□□ -1.05
PHTF2-210ENST00000468351 FARP1Q9Y4F1 1045 aaPredicted RBP8.46□□□□□ -1.06
PHTF2-210ENST00000468351 PLSCR2Q9NRY7 297 aa8.44□□□□□ -1.06
PHTF2-210ENST00000468351 DCBLD2Q96PD2 775 aa8.43□□□□□ -1.06
PHTF2-210ENST00000468351 ZNF579Q8NAF0 562 aaKnown RBP8.38□□□□□ -1.07
PHTF2-210ENST00000468351 PAK3O75914 559 aaPredicted RBP8.32□□□□□ -1.08
PHTF2-210ENST00000468351 ZRANB1Q9UGI0 708 aa8.31□□□□□ -1.08
PHTF2-210ENST00000468351 STAG3Q9UJ98 1225 aa8.3□□□□□ -1.08
PHTF2-210ENST00000468351 OTUD5Q96G74 571 aa8.28□□□□□ -1.08
PHTF2-210ENST00000468351 GALR2O43603 387 aaPredicted RBP8.26□□□□□ -1.09
PHTF2-210ENST00000468351 CREBZFQ9NS37 354 aa8.25□□□□□ -1.09
PHTF2-210ENST00000468351 POTEMA6NI47 508 aa8.23□□□□□ -1.09
PHTF2-210ENST00000468351 POTEB2H3BUK9 544 aa8.22□□□□□ -1.09
PHTF2-210ENST00000468351 NPM1P06748 294 aaKnown RBP eCLIP8.19□□□□□ -1.1
PHTF2-210ENST00000468351 POTEGQ6S5H5 508 aa8.19□□□□□ -1.1
PHTF2-210ENST00000468351 PCDH10Q9P2E7 1040 aa8.17□□□□□ -1.1
PHTF2-210ENST00000468351 PHF12Q96QT6 1004 aa8.16□□□□□ -1.1
PHTF2-210ENST00000468351 PELP1Q8IZL8 1130 aaKnown RBP8.12□□□□□ -1.11
PHTF2-210ENST00000468351 ASTLQ6HA08 431 aaPredicted RBP8.1□□□□□ -1.11
PHTF2-210ENST00000468351 MAMSTRQ6ZN01 415 aa8.1□□□□□ -1.11
PHTF2-210ENST00000468351 METRNQ9UJH8 293 aa8.1□□□□□ -1.11
PHTF2-210ENST00000468351 C7P10643 843 aa8.09□□□□□ -1.11
PHTF2-210ENST00000468351 SLC39A7Q92504 469 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms