RNA–Protein interactions for RNA: ENST00000468273.1

NF1-207, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-207ENST00000468273 AEBP2Q6ZN18 517 aaPredicted RBP24.47■■□□□ 1.51
NF1-207ENST00000468273 CHIC1Q5VXU3 224 aa23.42■■□□□ 1.34
NF1-207ENST00000468273 SENP3Q9H4L4 574 aaPredicted RBP21.03■□□□□ 0.96
NF1-207ENST00000468273 PHF23Q9BUL5 403 aaPredicted RBP20.74■□□□□ 0.91
NF1-207ENST00000468273 FOXD1Q16676 465 aa19.53■□□□□ 0.72
NF1-207ENST00000468273 PLPPR3Q6T4P5 718 aa19.43■□□□□ 0.7
NF1-207ENST00000468273 MSH5O43196 834 aa18.46■□□□□ 0.55
NF1-207ENST00000468273 POTEDQ86YR6 584 aa18.24■□□□□ 0.51
NF1-207ENST00000468273 PIAS4Q8N2W9 510 aaPredicted RBP18.23■□□□□ 0.51
NF1-207ENST00000468273 ADRA2BP18089 450 aa18.21■□□□□ 0.51
NF1-207ENST00000468273 KCNA4P22459 653 aa18.06■□□□□ 0.48
NF1-207ENST00000468273 PPP6R1Q9UPN7 881 aa18.06■□□□□ 0.48
NF1-207ENST00000468273 EHMT2Q96KQ7 1210 aa18.02■□□□□ 0.48
NF1-207ENST00000468273 CSRNP3Q8WYN3 585 aa17.38■□□□□ 0.37
NF1-207ENST00000468273 SLC4A1APQ9BWU0 796 aaKnown RBP17.34■□□□□ 0.37
NF1-207ENST00000468273 PPP4R3CPQ6ZMV5 832 aa17.26■□□□□ 0.35
NF1-207ENST00000468273 NCBP3Q53F19 620 aaKnown RBP17.05■□□□□ 0.32
NF1-207ENST00000468273 NPM3O75607 178 aaKnown RBP16.88■□□□□ 0.29
NF1-207ENST00000468273 ZBTB22O15209 634 aa16.68■□□□□ 0.26
NF1-207ENST00000468273 DMRT2Q9Y5R5 561 aa16.63■□□□□ 0.25
NF1-207ENST00000468273 SCAF1Q9H7N4 1312 aaKnown RBP16.63■□□□□ 0.25
NF1-207ENST00000468273 MAPK8IP2Q13387 824 aaPredicted RBP16.56■□□□□ 0.24
NF1-207ENST00000468273 CNKSR2Q8WXI2 1034 aa16.54■□□□□ 0.24
NF1-207ENST00000468273 FOXD4L1Q9NU39 408 aa16.3■□□□□ 0.2
NF1-207ENST00000468273 DNAJC5BQ9UF47 199 aa16.3■□□□□ 0.2
NF1-207ENST00000468273 SLC24A1O60721 1099 aa16.16■□□□□ 0.18
NF1-207ENST00000468273 RTN4Q9NQC3 1192 aaKnown RBP16.07■□□□□ 0.16
NF1-207ENST00000468273 AMER1Q5JTC6 1135 aaPredicted RBP16.02■□□□□ 0.16
NF1-207ENST00000468273 RNF216Q9NWF9 866 aaPredicted RBP15.98■□□□□ 0.15
NF1-207ENST00000468273 HOXD11P31277 338 aaPredicted RBP15.94■□□□□ 0.14
NF1-207ENST00000468273 DCAF8L1A6NGE4 600 aa15.88■□□□□ 0.13
NF1-207ENST00000468273 CACNB1Q02641 598 aaPredicted RBP15.88■□□□□ 0.13
NF1-207ENST00000468273 SLC4A2P04920 1241 aa15.72■□□□□ 0.11
NF1-207ENST00000468273 RNF39Q9H2S5 420 aa15.68■□□□□ 0.1
NF1-207ENST00000468273 ATXN8OSP0DMR3 200 aa15.63■□□□□ 0.09
NF1-207ENST00000468273 FKBP8Q14318 412 aa15.61■□□□□ 0.09
NF1-207ENST00000468273 MYCNP04198 464 aaPredicted RBP15.56■□□□□ 0.08
NF1-207ENST00000468273 C1QBPQ07021 282 aaKnown RBP15.49■□□□□ 0.07
NF1-207ENST00000468273 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.16■□□□□ 0.02
NF1-207ENST00000468273 ATF5Q9Y2D1 282 aaPredicted RBP15.1■□□□□ 0.01
NF1-207ENST00000468273 SAMD1Q6SPF0 538 aaPredicted RBP14.92□□□□□ -0.02
NF1-207ENST00000468273 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.89□□□□□ -0.03
NF1-207ENST00000468273 HNRNPUL2Q1KMD3 747 aaKnown RBP14.89□□□□□ -0.03
NF1-207ENST00000468273 U3KPZ7 1027 aaPredicted RBP14.82□□□□□ -0.04
NF1-207ENST00000468273 PLCB2Q00722 1185 aa14.76□□□□□ -0.05
NF1-207ENST00000468273 FBXO3Q9UK99 471 aa14.73□□□□□ -0.05
NF1-207ENST00000468273 ZNF219Q9P2Y4 722 aaPredicted RBP14.69□□□□□ -0.06
NF1-207ENST00000468273 CAPN15O75808 1086 aa14.63□□□□□ -0.07
NF1-207ENST00000468273 SPDYE4A6NLX3 237 aa14.61□□□□□ -0.07
NF1-207ENST00000468273 PROM2Q8N271 834 aa14.61□□□□□ -0.07
NF1-207ENST00000468273 DSG3P32926 999 aa14.6□□□□□ -0.07
NF1-207ENST00000468273 SPINK5Q9NQ38 1064 aaPredicted RBP14.6□□□□□ -0.07
NF1-207ENST00000468273 VASPP50552 380 aaPredicted RBP14.57□□□□□ -0.08
NF1-207ENST00000468273 APLP2Q06481 763 aa14.52□□□□□ -0.09
NF1-207ENST00000468273 MKRN4PQ13434 485 aaPredicted RBP14.52□□□□□ -0.09
NF1-207ENST00000468273 HAP1P54257 671 aaPredicted RBP14.5□□□□□ -0.09
NF1-207ENST00000468273 IFNLR1Q8IU57 520 aaPredicted RBP14.46□□□□□ -0.09
NF1-207ENST00000468273 BCANQ96GW7 911 aa14.4□□□□□ -0.1
NF1-207ENST00000468273 PKD2Q13563 968 aa14.39□□□□□ -0.11
NF1-207ENST00000468273 DCAF8L2P0C7V8 631 aa14.38□□□□□ -0.11
NF1-207ENST00000468273 TRHP20396 242 aaPredicted RBP14.33□□□□□ -0.12
NF1-207ENST00000468273 VSIG10Q8N0Z9 540 aa14.33□□□□□ -0.12
NF1-207ENST00000468273 FBLN2P98095 1184 aa14.31□□□□□ -0.12
NF1-207ENST00000468273 PRKCSHP14314 528 aaPredicted RBP14.29□□□□□ -0.12
NF1-207ENST00000468273 POTEHQ6S545 545 aa14.27□□□□□ -0.13
NF1-207ENST00000468273 TAOK2Q9UL54 1235 aa14.27□□□□□ -0.13
NF1-207ENST00000468273 ABCB7O75027 752 aa14.23□□□□□ -0.13
NF1-207ENST00000468273 BBXQ8WY36 941 aaPredicted RBP14.14□□□□□ -0.15
NF1-207ENST00000468273 KDM2AQ9Y2K7 1162 aa14.13□□□□□ -0.15
NF1-207ENST00000468273 POLA2Q14181 598 aa14.11□□□□□ -0.15
NF1-207ENST00000468273 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.1□□□□□ -0.15
NF1-207ENST00000468273 NPM1P06748 294 aaKnown RBP eCLIP14.07□□□□□ -0.16
NF1-207ENST00000468273 SPOCK2Q92563 424 aa14.07□□□□□ -0.16
NF1-207ENST00000468273 ECM2O94769 699 aaPredicted RBP14.04□□□□□ -0.16
NF1-207ENST00000468273 PAXIP1Q6ZW49 1069 aaPredicted RBP14.03□□□□□ -0.16
NF1-207ENST00000468273 RBM42Q9BTD8 480 aaKnown RBP14.03□□□□□ -0.16
NF1-207ENST00000468273 TPRNQ4KMQ1 711 aa14.02□□□□□ -0.17
NF1-207ENST00000468273 KLHL34Q8N239 644 aa13.99□□□□□ -0.17
NF1-207ENST00000468273 CFAP44Q96MT7 982 aa13.97□□□□□ -0.17
NF1-207ENST00000468273 ZBTB12Q9Y330 459 aaPredicted RBP13.95□□□□□ -0.18
NF1-207ENST00000468273 RGL2O15211 777 aa13.92□□□□□ -0.18
NF1-207ENST00000468273 STAG3Q9UJ98 1225 aa13.88□□□□□ -0.19
NF1-207ENST00000468273 SPRYD3Q8NCJ5 442 aa13.87□□□□□ -0.19
NF1-207ENST00000468273 TSHZ2Q9NRE2 1034 aa13.87□□□□□ -0.19
NF1-207ENST00000468273 PLCD3Q8N3E9 789 aa13.8□□□□□ -0.2
NF1-207ENST00000468273 ZNF692Q9BU19 519 aaPredicted RBP13.76□□□□□ -0.21
NF1-207ENST00000468273 DNAJC5Q9H3Z4 198 aa13.76□□□□□ -0.21
NF1-207ENST00000468273 SSUH2Q9Y2M2 353 aa13.74□□□□□ -0.21
NF1-207ENST00000468273 CHRDL2Q6WN34 429 aa13.72□□□□□ -0.21
NF1-207ENST00000468273 CHGAP10645 457 aaKnown RBP13.71□□□□□ -0.21
NF1-207ENST00000468273 SPDYE2BA6NHP3 402 aa13.69□□□□□ -0.22
NF1-207ENST00000468273 SPDYE6P0CI01 402 aa13.69□□□□□ -0.22
NF1-207ENST00000468273 SPDYE2Q495Y8 402 aa13.69□□□□□ -0.22
NF1-207ENST00000468273 MIER1Q8N108 512 aa13.69□□□□□ -0.22
NF1-207ENST00000468273 PABPN1Q86U42 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
NF1-207ENST00000468273 OSCARQ8IYS5 282 aa13.64□□□□□ -0.23
NF1-207ENST00000468273 CIZ1Q9ULV3 898 aaPredicted RBP13.64□□□□□ -0.23
NF1-207ENST00000468273 AKT1S1Q96B36 256 aa13.63□□□□□ -0.23
NF1-207ENST00000468273 NBR1Q14596 966 aa13.62□□□□□ -0.23
NF1-207ENST00000468273 HS6ST3Q8IZP7 471 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms