RNA–Protein interactions for RNA: ENST00000468079.1

CFHR1-203, Transcript of complement factor H related 1, humanhuman

TSL 2

Gene CFHR1, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR1-203ENST00000468079 AEBP2Q6ZN18 517 aaPredicted RBP28.39■■■□□ 2.14
CFHR1-203ENST00000468079 CHIC1Q5VXU3 224 aa26.55■■□□□ 1.84
CFHR1-203ENST00000468079 SENP3Q9H4L4 574 aaPredicted RBP24.21■■□□□ 1.47
CFHR1-203ENST00000468079 PHF23Q9BUL5 403 aaPredicted RBP23.9■■□□□ 1.42
CFHR1-203ENST00000468079 FOXD1Q16676 465 aa22.67■■□□□ 1.22
CFHR1-203ENST00000468079 POTEDQ86YR6 584 aa21.48■■□□□ 1.03
CFHR1-203ENST00000468079 MSH5O43196 834 aa21.28■■□□□ 1
CFHR1-203ENST00000468079 PIAS4Q8N2W9 510 aaPredicted RBP21.07■□□□□ 0.96
CFHR1-203ENST00000468079 PLPPR3Q6T4P5 718 aa21.02■□□□□ 0.96
CFHR1-203ENST00000468079 PPP6R1Q9UPN7 881 aa20.95■□□□□ 0.94
CFHR1-203ENST00000468079 ADRA2BP18089 450 aa20.86■□□□□ 0.93
CFHR1-203ENST00000468079 MAPK8IP2Q13387 824 aaPredicted RBP19.29■□□□□ 0.68
CFHR1-203ENST00000468079 DMRT2Q9Y5R5 561 aa19.15■□□□□ 0.66
CFHR1-203ENST00000468079 SCAF1Q9H7N4 1312 aaKnown RBP19■□□□□ 0.63
CFHR1-203ENST00000468079 CACNB1Q02641 598 aaPredicted RBP18.56■□□□□ 0.56
CFHR1-203ENST00000468079 DCAF8L1A6NGE4 600 aa18.45■□□□□ 0.54
CFHR1-203ENST00000468079 PPP4R3CPQ6ZMV5 832 aa18.42■□□□□ 0.54
CFHR1-203ENST00000468079 HOXD11P31277 338 aaPredicted RBP18.29■□□□□ 0.52
CFHR1-203ENST00000468079 RNF39Q9H2S5 420 aa18.16■□□□□ 0.5
CFHR1-203ENST00000468079 CNKSR2Q8WXI2 1034 aa18.12■□□□□ 0.49
CFHR1-203ENST00000468079 RNF216Q9NWF9 866 aaPredicted RBP18.05■□□□□ 0.48
CFHR1-203ENST00000468079 C1QBPQ07021 282 aaKnown RBP17.85■□□□□ 0.45
CFHR1-203ENST00000468079 DNAJC5BQ9UF47 199 aa17.66■□□□□ 0.42
CFHR1-203ENST00000468079 NCBP3Q53F19 620 aaKnown RBP17.55■□□□□ 0.4
CFHR1-203ENST00000468079 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.47■□□□□ 0.39
CFHR1-203ENST00000468079 NPM3O75607 178 aaKnown RBP17.34■□□□□ 0.37
CFHR1-203ENST00000468079 U3KPZ7 1027 aaPredicted RBP17.05■□□□□ 0.32
CFHR1-203ENST00000468079 SPINK5Q9NQ38 1064 aaPredicted RBP16.96■□□□□ 0.31
CFHR1-203ENST00000468079 CAPN15O75808 1086 aa16.92■□□□□ 0.3
CFHR1-203ENST00000468079 DSG3P32926 999 aa16.9■□□□□ 0.3
CFHR1-203ENST00000468079 POTEHQ6S545 545 aa16.75■□□□□ 0.27
CFHR1-203ENST00000468079 KCNA4P22459 653 aa16.7■□□□□ 0.26
CFHR1-203ENST00000468079 SLC4A2P04920 1241 aa16.68■□□□□ 0.26
CFHR1-203ENST00000468079 TRHP20396 242 aaPredicted RBP16.58■□□□□ 0.24
CFHR1-203ENST00000468079 ABCB7O75027 752 aa16.52■□□□□ 0.24
CFHR1-203ENST00000468079 ZNF219Q9P2Y4 722 aaPredicted RBP16.45■□□□□ 0.22
CFHR1-203ENST00000468079 APLP2Q06481 763 aa16.44■□□□□ 0.22
CFHR1-203ENST00000468079 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.36■□□□□ 0.21
CFHR1-203ENST00000468079 HNRNPUL2Q1KMD3 747 aaKnown RBP16.36■□□□□ 0.21
CFHR1-203ENST00000468079 SAMD1Q6SPF0 538 aaPredicted RBP16.27■□□□□ 0.2
CFHR1-203ENST00000468079 RBM42Q9BTD8 480 aaKnown RBP16.07■□□□□ 0.16
CFHR1-203ENST00000468079 POLA2Q14181 598 aa16.04■□□□□ 0.16
CFHR1-203ENST00000468079 MYCNP04198 464 aaPredicted RBP16.01■□□□□ 0.15
CFHR1-203ENST00000468079 CHRDL2Q6WN34 429 aa15.93■□□□□ 0.14
CFHR1-203ENST00000468079 ATF5Q9Y2D1 282 aaPredicted RBP15.75■□□□□ 0.11
CFHR1-203ENST00000468079 SLC4A1APQ9BWU0 796 aaKnown RBP15.66■□□□□ 0.1
CFHR1-203ENST00000468079 AKT1S1Q96B36 256 aa15.65■□□□□ 0.1
CFHR1-203ENST00000468079 FOXD4L1Q9NU39 408 aa15.64■□□□□ 0.09
CFHR1-203ENST00000468079 ZBTB12Q9Y330 459 aaPredicted RBP15.58■□□□□ 0.08
CFHR1-203ENST00000468079 REM2Q8IYK8 340 aaPredicted RBP15.54■□□□□ 0.08
CFHR1-203ENST00000468079 OSCARQ8IYS5 282 aa15.52■□□□□ 0.08
CFHR1-203ENST00000468079 SP7Q8TDD2 431 aaPredicted RBP15.51■□□□□ 0.07
CFHR1-203ENST00000468079 PIP4P2Q8N4L2 257 aa15.47■□□□□ 0.07
CFHR1-203ENST00000468079 PITPNM1O00562 1244 aa15.38■□□□□ 0.05
CFHR1-203ENST00000468079 ZBTB22O15209 634 aa15.35■□□□□ 0.05
CFHR1-203ENST00000468079 HAX1O00165 279 aa15.33■□□□□ 0.04
CFHR1-203ENST00000468079 FXR2P51116 673 aaKnown RBP eCLIP15.3■□□□□ 0.04
CFHR1-203ENST00000468079 ATXN8OSP0DMR3 200 aa15.17■□□□□ 0.02
CFHR1-203ENST00000468079 EVX2Q03828 476 aa15.14■□□□□ 0.01
CFHR1-203ENST00000468079 SPDYE2BA6NHP3 402 aa15.11■□□□□ 0.01
CFHR1-203ENST00000468079 SPDYE6P0CI01 402 aa15.11■□□□□ 0.01
CFHR1-203ENST00000468079 SPDYE2Q495Y8 402 aa15.11■□□□□ 0.01
CFHR1-203ENST00000468079 FBLN2P98095 1184 aa15.09■□□□□ 0.01
CFHR1-203ENST00000468079 CLEC11AQ9Y240 323 aa15□□□□□ -0.01
CFHR1-203ENST00000468079 PRKAR2AP13861 404 aaKnown RBP14.98□□□□□ -0.01
CFHR1-203ENST00000468079 MKRN4PQ13434 485 aaPredicted RBP14.98□□□□□ -0.01
CFHR1-203ENST00000468079 SPDYE1Q8NFV5 336 aaPredicted RBP14.95□□□□□ -0.02
CFHR1-203ENST00000468079 ZNF692Q9BU19 519 aaPredicted RBP14.91□□□□□ -0.02
CFHR1-203ENST00000468079 SSUH2Q9Y2M2 353 aa14.87□□□□□ -0.03
CFHR1-203ENST00000468079 C19orf67A6NJJ6 358 aa14.83□□□□□ -0.04
CFHR1-203ENST00000468079 CHADLQ6NUI6 762 aa14.77□□□□□ -0.05
CFHR1-203ENST00000468079 GABBR2O75899 941 aa14.73□□□□□ -0.05
CFHR1-203ENST00000468079 PABPN1Q86U42 306 aaKnown RBP eCLIP14.69□□□□□ -0.06
CFHR1-203ENST00000468079 PRR29P0C7W0 189 aa14.67□□□□□ -0.06
CFHR1-203ENST00000468079 LHX8Q68G74 356 aa14.57□□□□□ -0.08
CFHR1-203ENST00000468079 CD44P16070 742 aaKnown RBP14.48□□□□□ -0.09
CFHR1-203ENST00000468079 FARP1Q9Y4F1 1045 aaPredicted RBP14.47□□□□□ -0.09
CFHR1-203ENST00000468079 POTEIP0CG38 1075 aa14.43□□□□□ -0.1
CFHR1-203ENST00000468079 EHMT2Q96KQ7 1210 aa14.42□□□□□ -0.1
CFHR1-203ENST00000468079 CSRNP3Q8WYN3 585 aa14.39□□□□□ -0.11
CFHR1-203ENST00000468079 CLCN6P51797 869 aa14.27□□□□□ -0.13
CFHR1-203ENST00000468079 DCBLD2Q96PD2 775 aa14.24□□□□□ -0.13
CFHR1-203ENST00000468079 ZRANB1Q9UGI0 708 aa14.23□□□□□ -0.13
CFHR1-203ENST00000468079 CREBZFQ9NS37 354 aa14.22□□□□□ -0.13
CFHR1-203ENST00000468079 ZNF579Q8NAF0 562 aaKnown RBP14.2□□□□□ -0.14
CFHR1-203ENST00000468079 STAG3Q9UJ98 1225 aa14.14□□□□□ -0.15
CFHR1-203ENST00000468079 GALR2O43603 387 aaPredicted RBP14.11□□□□□ -0.15
CFHR1-203ENST00000468079 SPDYE4A6NLX3 237 aa14.07□□□□□ -0.16
CFHR1-203ENST00000468079 PHF12Q96QT6 1004 aa14.02□□□□□ -0.17
CFHR1-203ENST00000468079 PAK3O75914 559 aaPredicted RBP13.98□□□□□ -0.17
CFHR1-203ENST00000468079 PLSCR2Q9NRY7 297 aa13.98□□□□□ -0.17
CFHR1-203ENST00000468079 POTEB2H3BUK9 544 aa13.97□□□□□ -0.17
CFHR1-203ENST00000468079 OTUD5Q96G74 571 aa13.97□□□□□ -0.17
CFHR1-203ENST00000468079 MNX1P50219 401 aaPredicted RBP13.92□□□□□ -0.18
CFHR1-203ENST00000468079 NPM1P06748 294 aaKnown RBP eCLIP13.91□□□□□ -0.18
CFHR1-203ENST00000468079 PELP1Q8IZL8 1130 aaKnown RBP13.9□□□□□ -0.18
CFHR1-203ENST00000468079 MS4A3Q96HJ5 214 aa13.79□□□□□ -0.2
CFHR1-203ENST00000468079 ASTLQ6HA08 431 aaPredicted RBP13.75□□□□□ -0.21
CFHR1-203ENST00000468079 METRNQ9UJH8 293 aa13.74□□□□□ -0.21
CFHR1-203ENST00000468079 POTEMA6NI47 508 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms