RNA–Protein interactions for RNA: ENST00000467983.1

ABCB4-208, Transcript of ATP binding cassette subfamily B member 4, humanhuman

TSL 3

Gene ABCB4, Length 414 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB4-208ENST00000467983 AEBP2Q6ZN18 517 aaPredicted RBP28.54■■■□□ 2.16
ABCB4-208ENST00000467983 CHIC1Q5VXU3 224 aa27.39■■□□□ 1.98
ABCB4-208ENST00000467983 SENP3Q9H4L4 574 aaPredicted RBP24.24■■□□□ 1.47
ABCB4-208ENST00000467983 PHF23Q9BUL5 403 aaPredicted RBP24.07■■□□□ 1.44
ABCB4-208ENST00000467983 FOXD1Q16676 465 aa22.58■■□□□ 1.21
ABCB4-208ENST00000467983 PLPPR3Q6T4P5 718 aa21.98■■□□□ 1.11
ABCB4-208ENST00000467983 PPP6R1Q9UPN7 881 aa21.37■■□□□ 1.01
ABCB4-208ENST00000467983 ADRA2BP18089 450 aa21.26■□□□□ 0.99
ABCB4-208ENST00000467983 PIAS4Q8N2W9 510 aaPredicted RBP21.09■□□□□ 0.97
ABCB4-208ENST00000467983 MSH5O43196 834 aa20.98■□□□□ 0.95
ABCB4-208ENST00000467983 POTEDQ86YR6 584 aa19.96■□□□□ 0.79
ABCB4-208ENST00000467983 MAPK8IP2Q13387 824 aaPredicted RBP19.44■□□□□ 0.7
ABCB4-208ENST00000467983 SCAF1Q9H7N4 1312 aaKnown RBP19.42■□□□□ 0.7
ABCB4-208ENST00000467983 DMRT2Q9Y5R5 561 aa19.31■□□□□ 0.68
ABCB4-208ENST00000467983 PPP4R3CPQ6ZMV5 832 aa19.3■□□□□ 0.68
ABCB4-208ENST00000467983 CNKSR2Q8WXI2 1034 aa18.88■□□□□ 0.61
ABCB4-208ENST00000467983 HOXD11P31277 338 aaPredicted RBP18.76■□□□□ 0.59
ABCB4-208ENST00000467983 RNF216Q9NWF9 866 aaPredicted RBP18.66■□□□□ 0.58
ABCB4-208ENST00000467983 NCBP3Q53F19 620 aaKnown RBP18.61■□□□□ 0.57
ABCB4-208ENST00000467983 NPM3O75607 178 aaKnown RBP18.41■□□□□ 0.54
ABCB4-208ENST00000467983 KCNA4P22459 653 aa18.31■□□□□ 0.52
ABCB4-208ENST00000467983 DCAF8L1A6NGE4 600 aa18.28■□□□□ 0.52
ABCB4-208ENST00000467983 DNAJC5BQ9UF47 199 aa18.14■□□□□ 0.49
ABCB4-208ENST00000467983 RNF39Q9H2S5 420 aa17.98■□□□□ 0.47
ABCB4-208ENST00000467983 CACNB1Q02641 598 aaPredicted RBP17.73■□□□□ 0.43
ABCB4-208ENST00000467983 C1QBPQ07021 282 aaKnown RBP17.71■□□□□ 0.43
ABCB4-208ENST00000467983 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.71■□□□□ 0.43
ABCB4-208ENST00000467983 SLC4A2P04920 1241 aa17.54■□□□□ 0.4
ABCB4-208ENST00000467983 U3KPZ7 1027 aaPredicted RBP17.48■□□□□ 0.39
ABCB4-208ENST00000467983 SLC4A1APQ9BWU0 796 aaKnown RBP17.3■□□□□ 0.36
ABCB4-208ENST00000467983 SPINK5Q9NQ38 1064 aaPredicted RBP17.1■□□□□ 0.33
ABCB4-208ENST00000467983 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.03■□□□□ 0.32
ABCB4-208ENST00000467983 HNRNPUL2Q1KMD3 747 aaKnown RBP17.03■□□□□ 0.32
ABCB4-208ENST00000467983 MYCNP04198 464 aaPredicted RBP17■□□□□ 0.31
ABCB4-208ENST00000467983 FOXD4L1Q9NU39 408 aa16.98■□□□□ 0.31
ABCB4-208ENST00000467983 CAPN15O75808 1086 aa16.97■□□□□ 0.31
ABCB4-208ENST00000467983 SAMD1Q6SPF0 538 aaPredicted RBP16.96■□□□□ 0.31
ABCB4-208ENST00000467983 APLP2Q06481 763 aa16.94■□□□□ 0.3
ABCB4-208ENST00000467983 DSG3P32926 999 aa16.92■□□□□ 0.3
ABCB4-208ENST00000467983 ZBTB22O15209 634 aa16.89■□□□□ 0.29
ABCB4-208ENST00000467983 ZNF219Q9P2Y4 722 aaPredicted RBP16.82■□□□□ 0.28
ABCB4-208ENST00000467983 TRHP20396 242 aaPredicted RBP16.76■□□□□ 0.27
ABCB4-208ENST00000467983 ABCB7O75027 752 aa16.61■□□□□ 0.25
ABCB4-208ENST00000467983 ATF5Q9Y2D1 282 aaPredicted RBP16.6■□□□□ 0.25
ABCB4-208ENST00000467983 ATXN8OSP0DMR3 200 aa16.49■□□□□ 0.23
ABCB4-208ENST00000467983 POLA2Q14181 598 aa16.45■□□□□ 0.22
ABCB4-208ENST00000467983 CSRNP3Q8WYN3 585 aa16.37■□□□□ 0.21
ABCB4-208ENST00000467983 EHMT2Q96KQ7 1210 aa16.17■□□□□ 0.18
ABCB4-208ENST00000467983 ZBTB12Q9Y330 459 aaPredicted RBP16.16■□□□□ 0.18
ABCB4-208ENST00000467983 RBM42Q9BTD8 480 aaKnown RBP16.08■□□□□ 0.16
ABCB4-208ENST00000467983 OSCARQ8IYS5 282 aa15.9■□□□□ 0.14
ABCB4-208ENST00000467983 MKRN4PQ13434 485 aaPredicted RBP15.89■□□□□ 0.13
ABCB4-208ENST00000467983 FBLN2P98095 1184 aa15.84■□□□□ 0.13
ABCB4-208ENST00000467983 AKT1S1Q96B36 256 aa15.82■□□□□ 0.12
ABCB4-208ENST00000467983 SPDYE2BA6NHP3 402 aa15.71■□□□□ 0.11
ABCB4-208ENST00000467983 SPDYE6P0CI01 402 aa15.71■□□□□ 0.11
ABCB4-208ENST00000467983 SPDYE2Q495Y8 402 aa15.71■□□□□ 0.11
ABCB4-208ENST00000467983 POTEHQ6S545 545 aa15.68■□□□□ 0.1
ABCB4-208ENST00000467983 REM2Q8IYK8 340 aaPredicted RBP15.66■□□□□ 0.1
ABCB4-208ENST00000467983 CHRDL2Q6WN34 429 aa15.62■□□□□ 0.09
ABCB4-208ENST00000467983 SSUH2Q9Y2M2 353 aa15.59■□□□□ 0.09
ABCB4-208ENST00000467983 ZNF692Q9BU19 519 aaPredicted RBP15.5■□□□□ 0.07
ABCB4-208ENST00000467983 PITPNM1O00562 1244 aa15.48■□□□□ 0.07
ABCB4-208ENST00000467983 FXR2P51116 673 aaKnown RBP eCLIP15.34■□□□□ 0.05
ABCB4-208ENST00000467983 PIP4P2Q8N4L2 257 aa15.34■□□□□ 0.05
ABCB4-208ENST00000467983 SPDYE1Q8NFV5 336 aaPredicted RBP15.32■□□□□ 0.04
ABCB4-208ENST00000467983 PABPN1Q86U42 306 aaKnown RBP eCLIP15.3■□□□□ 0.04
ABCB4-208ENST00000467983 SPDYE4A6NLX3 237 aa15.21■□□□□ 0.03
ABCB4-208ENST00000467983 CLEC11AQ9Y240 323 aa15.18■□□□□ 0.02
ABCB4-208ENST00000467983 PROM2Q8N271 834 aa15.06■□□□□ 0
ABCB4-208ENST00000467983 PRKAR2AP13861 404 aaKnown RBP15.04■□□□□ -0
ABCB4-208ENST00000467983 PRR29P0C7W0 189 aa15.03■□□□□ -0
ABCB4-208ENST00000467983 STAG3Q9UJ98 1225 aa14.96□□□□□ -0.01
ABCB4-208ENST00000467983 CHADLQ6NUI6 762 aa14.92□□□□□ -0.02
ABCB4-208ENST00000467983 HAX1O00165 279 aa14.88□□□□□ -0.03
ABCB4-208ENST00000467983 SP7Q8TDD2 431 aaPredicted RBP14.85□□□□□ -0.03
ABCB4-208ENST00000467983 C19orf67A6NJJ6 358 aa14.83□□□□□ -0.04
ABCB4-208ENST00000467983 EVX2Q03828 476 aa14.83□□□□□ -0.04
ABCB4-208ENST00000467983 CREBZFQ9NS37 354 aa14.83□□□□□ -0.04
ABCB4-208ENST00000467983 FARP1Q9Y4F1 1045 aaPredicted RBP14.79□□□□□ -0.04
ABCB4-208ENST00000467983 FKBP8Q14318 412 aa14.73□□□□□ -0.05
ABCB4-208ENST00000467983 MNX1P50219 401 aaPredicted RBP14.68□□□□□ -0.06
ABCB4-208ENST00000467983 CD44P16070 742 aaKnown RBP14.58□□□□□ -0.08
ABCB4-208ENST00000467983 GABBR2O75899 941 aa14.49□□□□□ -0.09
ABCB4-208ENST00000467983 NPM1P06748 294 aaKnown RBP eCLIP14.48□□□□□ -0.09
ABCB4-208ENST00000467983 ZNF579Q8NAF0 562 aaKnown RBP14.45□□□□□ -0.1
ABCB4-208ENST00000467983 CLCN6P51797 869 aa14.41□□□□□ -0.1
ABCB4-208ENST00000467983 MIER1Q8N108 512 aa14.41□□□□□ -0.1
ABCB4-208ENST00000467983 ZRANB1Q9UGI0 708 aa14.4□□□□□ -0.1
ABCB4-208ENST00000467983 FBXO3Q9UK99 471 aa14.36□□□□□ -0.11
ABCB4-208ENST00000467983 PLEKHG5O94827 1062 aa14.33□□□□□ -0.12
ABCB4-208ENST00000467983 PLCD3Q8N3E9 789 aa14.32□□□□□ -0.12
ABCB4-208ENST00000467983 PAK3O75914 559 aaPredicted RBP14.31□□□□□ -0.12
ABCB4-208ENST00000467983 PHF12Q96QT6 1004 aa14.26□□□□□ -0.13
ABCB4-208ENST00000467983 ZBTB47Q9UFB7 747 aaPredicted RBP14.25□□□□□ -0.13
ABCB4-208ENST00000467983 POTEIP0CG38 1075 aa14.24□□□□□ -0.13
ABCB4-208ENST00000467983 RASEFQ8IZ41 740 aa14.24□□□□□ -0.13
ABCB4-208ENST00000467983 CCDC61Q9Y6R9 512 aa14.24□□□□□ -0.13
ABCB4-208ENST00000467983 NUBP1P53384 320 aa14.23□□□□□ -0.13
ABCB4-208ENST00000467983 VASPP50552 380 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms