RNA–Protein interactions for RNA: ENST00000467774.1

TRIT1-207, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 2

Gene TRIT1, Length 464 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-207ENST00000467774 AEBP2Q6ZN18 517 aaPredicted RBP24.4■■□□□ 1.5
TRIT1-207ENST00000467774 CHIC1Q5VXU3 224 aa24.24■■□□□ 1.47
TRIT1-207ENST00000467774 PHF23Q9BUL5 403 aaPredicted RBP21.22■□□□□ 0.99
TRIT1-207ENST00000467774 SENP3Q9H4L4 574 aaPredicted RBP20.91■□□□□ 0.94
TRIT1-207ENST00000467774 PLPPR3Q6T4P5 718 aa19.89■□□□□ 0.77
TRIT1-207ENST00000467774 FOXD1Q16676 465 aa19.22■□□□□ 0.67
TRIT1-207ENST00000467774 ADRA2BP18089 450 aa18.65■□□□□ 0.58
TRIT1-207ENST00000467774 PPP6R1Q9UPN7 881 aa18.61■□□□□ 0.57
TRIT1-207ENST00000467774 PIAS4Q8N2W9 510 aaPredicted RBP18.26■□□□□ 0.51
TRIT1-207ENST00000467774 MSH5O43196 834 aa17.81■□□□□ 0.44
TRIT1-207ENST00000467774 PPP4R3CPQ6ZMV5 832 aa17.48■□□□□ 0.39
TRIT1-207ENST00000467774 SCAF1Q9H7N4 1312 aaKnown RBP17.34■□□□□ 0.37
TRIT1-207ENST00000467774 KCNA4P22459 653 aa17.28■□□□□ 0.36
TRIT1-207ENST00000467774 NCBP3Q53F19 620 aaKnown RBP17.26■□□□□ 0.35
TRIT1-207ENST00000467774 CNKSR2Q8WXI2 1034 aa17■□□□□ 0.31
TRIT1-207ENST00000467774 NPM3O75607 178 aaKnown RBP16.81■□□□□ 0.28
TRIT1-207ENST00000467774 MAPK8IP2Q13387 824 aaPredicted RBP16.8■□□□□ 0.28
TRIT1-207ENST00000467774 DMRT2Q9Y5R5 561 aa16.67■□□□□ 0.26
TRIT1-207ENST00000467774 SLC4A1APQ9BWU0 796 aaKnown RBP16.61■□□□□ 0.25
TRIT1-207ENST00000467774 RNF216Q9NWF9 866 aaPredicted RBP16.61■□□□□ 0.25
TRIT1-207ENST00000467774 HOXD11P31277 338 aaPredicted RBP16.43■□□□□ 0.22
TRIT1-207ENST00000467774 DNAJC5BQ9UF47 199 aa16.43■□□□□ 0.22
TRIT1-207ENST00000467774 EHMT2Q96KQ7 1210 aa16.34■□□□□ 0.21
TRIT1-207ENST00000467774 CSRNP3Q8WYN3 585 aa16.02■□□□□ 0.16
TRIT1-207ENST00000467774 FOXD4L1Q9NU39 408 aa15.95■□□□□ 0.14
TRIT1-207ENST00000467774 DCAF8L1A6NGE4 600 aa15.93■□□□□ 0.14
TRIT1-207ENST00000467774 ZBTB22O15209 634 aa15.83■□□□□ 0.12
TRIT1-207ENST00000467774 SLC4A2P04920 1241 aa15.76■□□□□ 0.11
TRIT1-207ENST00000467774 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.7■□□□□ 0.1
TRIT1-207ENST00000467774 MYCNP04198 464 aaPredicted RBP15.64■□□□□ 0.09
TRIT1-207ENST00000467774 POTEDQ86YR6 584 aa15.6■□□□□ 0.09
TRIT1-207ENST00000467774 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.51■□□□□ 0.07
TRIT1-207ENST00000467774 HNRNPUL2Q1KMD3 747 aaKnown RBP15.51■□□□□ 0.07
TRIT1-207ENST00000467774 ATXN8OSP0DMR3 200 aa15.46■□□□□ 0.07
TRIT1-207ENST00000467774 SAMD1Q6SPF0 538 aaPredicted RBP15.41■□□□□ 0.06
TRIT1-207ENST00000467774 U3KPZ7 1027 aaPredicted RBP15.37■□□□□ 0.05
TRIT1-207ENST00000467774 APLP2Q06481 763 aa15.34■□□□□ 0.05
TRIT1-207ENST00000467774 RNF39Q9H2S5 420 aa15.17■□□□□ 0.02
TRIT1-207ENST00000467774 C1QBPQ07021 282 aaKnown RBP15.11■□□□□ 0.01
TRIT1-207ENST00000467774 ATF5Q9Y2D1 282 aaPredicted RBP14.98□□□□□ -0.01
TRIT1-207ENST00000467774 ZNF219Q9P2Y4 722 aaPredicted RBP14.95□□□□□ -0.02
TRIT1-207ENST00000467774 CAPN15O75808 1086 aa14.86□□□□□ -0.03
TRIT1-207ENST00000467774 TRHP20396 242 aaPredicted RBP14.82□□□□□ -0.04
TRIT1-207ENST00000467774 SPINK5Q9NQ38 1064 aaPredicted RBP14.81□□□□□ -0.04
TRIT1-207ENST00000467774 POLA2Q14181 598 aa14.65□□□□□ -0.06
TRIT1-207ENST00000467774 CACNB1Q02641 598 aaPredicted RBP14.63□□□□□ -0.07
TRIT1-207ENST00000467774 ZBTB12Q9Y330 459 aaPredicted RBP14.62□□□□□ -0.07
TRIT1-207ENST00000467774 FBLN2P98095 1184 aa14.61□□□□□ -0.07
TRIT1-207ENST00000467774 FKBP8Q14318 412 aa14.52□□□□□ -0.09
TRIT1-207ENST00000467774 ABCB7O75027 752 aa14.51□□□□□ -0.09
TRIT1-207ENST00000467774 DSG3P32926 999 aa14.51□□□□□ -0.09
TRIT1-207ENST00000467774 MKRN4PQ13434 485 aaPredicted RBP14.39□□□□□ -0.11
TRIT1-207ENST00000467774 SPDYE4A6NLX3 237 aa14.32□□□□□ -0.12
TRIT1-207ENST00000467774 SPDYE2BA6NHP3 402 aa14.16□□□□□ -0.14
TRIT1-207ENST00000467774 SPDYE6P0CI01 402 aa14.16□□□□□ -0.14
TRIT1-207ENST00000467774 SPDYE2Q495Y8 402 aa14.16□□□□□ -0.14
TRIT1-207ENST00000467774 FBXO3Q9UK99 471 aa14.13□□□□□ -0.15
TRIT1-207ENST00000467774 OSCARQ8IYS5 282 aa14.1□□□□□ -0.15
TRIT1-207ENST00000467774 PROM2Q8N271 834 aa14.09□□□□□ -0.15
TRIT1-207ENST00000467774 ZNF692Q9BU19 519 aaPredicted RBP14.09□□□□□ -0.15
TRIT1-207ENST00000467774 RBM42Q9BTD8 480 aaKnown RBP13.99□□□□□ -0.17
TRIT1-207ENST00000467774 SSUH2Q9Y2M2 353 aa13.99□□□□□ -0.17
TRIT1-207ENST00000467774 PABPN1Q86U42 306 aaKnown RBP eCLIP13.88□□□□□ -0.19
TRIT1-207ENST00000467774 STAG3Q9UJ98 1225 aa13.86□□□□□ -0.19
TRIT1-207ENST00000467774 AMER1Q5JTC6 1135 aaPredicted RBP13.81□□□□□ -0.2
TRIT1-207ENST00000467774 AKT1S1Q96B36 256 aa13.81□□□□□ -0.2
TRIT1-207ENST00000467774 VASPP50552 380 aaPredicted RBP13.79□□□□□ -0.2
TRIT1-207ENST00000467774 SPDYE1Q8NFV5 336 aaPredicted RBP13.69□□□□□ -0.22
TRIT1-207ENST00000467774 PLEKHG5O94827 1062 aa13.66□□□□□ -0.22
TRIT1-207ENST00000467774 PLCD3Q8N3E9 789 aa13.61□□□□□ -0.23
TRIT1-207ENST00000467774 REM2Q8IYK8 340 aaPredicted RBP13.6□□□□□ -0.23
TRIT1-207ENST00000467774 RTN4Q9NQC3 1192 aaKnown RBP13.59□□□□□ -0.23
TRIT1-207ENST00000467774 MIER1Q8N108 512 aa13.57□□□□□ -0.24
TRIT1-207ENST00000467774 ZBTB47Q9UFB7 747 aaPredicted RBP13.57□□□□□ -0.24
TRIT1-207ENST00000467774 IFNLR1Q8IU57 520 aaPredicted RBP13.54□□□□□ -0.24
TRIT1-207ENST00000467774 KLHL34Q8N239 644 aa13.54□□□□□ -0.24
TRIT1-207ENST00000467774 CLEC11AQ9Y240 323 aa13.52□□□□□ -0.25
TRIT1-207ENST00000467774 PRR29P0C7W0 189 aa13.5□□□□□ -0.25
TRIT1-207ENST00000467774 SPOCK2Q92563 424 aa13.46□□□□□ -0.25
TRIT1-207ENST00000467774 PITPNM1O00562 1244 aa13.41□□□□□ -0.26
TRIT1-207ENST00000467774 CREBZFQ9NS37 354 aa13.28□□□□□ -0.28
TRIT1-207ENST00000467774 NPM1P06748 294 aaKnown RBP eCLIP13.25□□□□□ -0.29
TRIT1-207ENST00000467774 TRIM41Q8WV44 630 aa13.21□□□□□ -0.29
TRIT1-207ENST00000467774 GSE1Q14687 1217 aa13.2□□□□□ -0.3
TRIT1-207ENST00000467774 CHRDL2Q6WN34 429 aa13.19□□□□□ -0.3
TRIT1-207ENST00000467774 PKD2Q13563 968 aa13.18□□□□□ -0.3
TRIT1-207ENST00000467774 CIZ1Q9ULV3 898 aaPredicted RBP13.17□□□□□ -0.3
TRIT1-207ENST00000467774 ECM2O94769 699 aaPredicted RBP13.14□□□□□ -0.31
TRIT1-207ENST00000467774 MNX1P50219 401 aaPredicted RBP13.14□□□□□ -0.31
TRIT1-207ENST00000467774 FXR2P51116 673 aaKnown RBP eCLIP13.14□□□□□ -0.31
TRIT1-207ENST00000467774 FAM212AQ96EL1 285 aa13.14□□□□□ -0.31
TRIT1-207ENST00000467774 NUBP1P53384 320 aa13.12□□□□□ -0.31
TRIT1-207ENST00000467774 PRKAR2AP13861 404 aaKnown RBP13.11□□□□□ -0.31
TRIT1-207ENST00000467774 DCAF8Q5TAQ9 597 aa13.09□□□□□ -0.31
TRIT1-207ENST00000467774 FARP1Q9Y4F1 1045 aaPredicted RBP13.08□□□□□ -0.32
TRIT1-207ENST00000467774 CHADLQ6NUI6 762 aa13.06□□□□□ -0.32
TRIT1-207ENST00000467774 DCAF8L2P0C7V8 631 aa13.05□□□□□ -0.32
TRIT1-207ENST00000467774 PIP4P2Q8N4L2 257 aa13.03□□□□□ -0.32
TRIT1-207ENST00000467774 TAOK2Q9UL54 1235 aa13□□□□□ -0.33
TRIT1-207ENST00000467774 RASEFQ8IZ41 740 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms