RNA–Protein interactions for RNA: ENST00000467686.1

LMO7-209, Transcript of LIM domain 7, humanhuman

TSL 2

Gene LMO7, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-209ENST00000467686 AEBP2Q6ZN18 517 aaPredicted RBP22.6■■□□□ 1.21
LMO7-209ENST00000467686 CHIC1Q5VXU3 224 aa21.59■■□□□ 1.05
LMO7-209ENST00000467686 SENP3Q9H4L4 574 aaPredicted RBP19.19■□□□□ 0.66
LMO7-209ENST00000467686 PHF23Q9BUL5 403 aaPredicted RBP19.02■□□□□ 0.64
LMO7-209ENST00000467686 FOXD1Q16676 465 aa17.9■□□□□ 0.46
LMO7-209ENST00000467686 PLPPR3Q6T4P5 718 aa17.33■□□□□ 0.36
LMO7-209ENST00000467686 PPP6R1Q9UPN7 881 aa16.92■□□□□ 0.3
LMO7-209ENST00000467686 ADRA2BP18089 450 aa16.87■□□□□ 0.29
LMO7-209ENST00000467686 PIAS4Q8N2W9 510 aaPredicted RBP16.78■□□□□ 0.28
LMO7-209ENST00000467686 MSH5O43196 834 aa16.64■□□□□ 0.25
LMO7-209ENST00000467686 POTEDQ86YR6 584 aa15.98■□□□□ 0.15
LMO7-209ENST00000467686 MAPK8IP2Q13387 824 aaPredicted RBP15.47■□□□□ 0.07
LMO7-209ENST00000467686 SCAF1Q9H7N4 1312 aaKnown RBP15.37■□□□□ 0.05
LMO7-209ENST00000467686 DMRT2Q9Y5R5 561 aa15.25■□□□□ 0.03
LMO7-209ENST00000467686 PPP4R3CPQ6ZMV5 832 aa15.24■□□□□ 0.03
LMO7-209ENST00000467686 CNKSR2Q8WXI2 1034 aa14.88□□□□□ -0.03
LMO7-209ENST00000467686 HOXD11P31277 338 aaPredicted RBP14.75□□□□□ -0.05
LMO7-209ENST00000467686 RNF216Q9NWF9 866 aaPredicted RBP14.7□□□□□ -0.06
LMO7-209ENST00000467686 DCAF8L1A6NGE4 600 aa14.69□□□□□ -0.06
LMO7-209ENST00000467686 NCBP3Q53F19 620 aaKnown RBP14.68□□□□□ -0.06
LMO7-209ENST00000467686 NPM3O75607 178 aaKnown RBP14.5□□□□□ -0.09
LMO7-209ENST00000467686 KCNA4P22459 653 aa14.39□□□□□ -0.11
LMO7-209ENST00000467686 RNF39Q9H2S5 420 aa14.24□□□□□ -0.13
LMO7-209ENST00000467686 CACNB1Q02641 598 aaPredicted RBP14.23□□□□□ -0.13
LMO7-209ENST00000467686 DNAJC5BQ9UF47 199 aa14.15□□□□□ -0.14
LMO7-209ENST00000467686 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.1□□□□□ -0.155e-7■■□□□ 12
LMO7-209ENST00000467686 C1QBPQ07021 282 aaKnown RBP14.03□□□□□ -0.16
LMO7-209ENST00000467686 U3KPZ7 1027 aaPredicted RBP13.81□□□□□ -0.2
LMO7-209ENST00000467686 SLC4A2P04920 1241 aa13.8□□□□□ -0.2
LMO7-209ENST00000467686 SLC4A1APQ9BWU0 796 aaKnown RBP13.61□□□□□ -0.23
LMO7-209ENST00000467686 SPINK5Q9NQ38 1064 aaPredicted RBP13.59□□□□□ -0.23
LMO7-209ENST00000467686 CAPN15O75808 1086 aa13.55□□□□□ -0.24
LMO7-209ENST00000467686 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.44□□□□□ -0.26
LMO7-209ENST00000467686 HNRNPUL2Q1KMD3 747 aaKnown RBP13.44□□□□□ -0.26
LMO7-209ENST00000467686 DSG3P32926 999 aa13.41□□□□□ -0.26
LMO7-209ENST00000467686 TRHP20396 242 aaPredicted RBP13.4□□□□□ -0.26
LMO7-209ENST00000467686 APLP2Q06481 763 aa13.39□□□□□ -0.27
LMO7-209ENST00000467686 SAMD1Q6SPF0 538 aaPredicted RBP13.38□□□□□ -0.27
LMO7-209ENST00000467686 MYCNP04198 464 aaPredicted RBP13.37□□□□□ -0.27
LMO7-209ENST00000467686 FOXD4L1Q9NU39 408 aa13.34□□□□□ -0.27
LMO7-209ENST00000467686 ZNF219Q9P2Y4 722 aaPredicted RBP13.31□□□□□ -0.28
LMO7-209ENST00000467686 ABCB7O75027 752 aa13.27□□□□□ -0.29
LMO7-209ENST00000467686 ZBTB22O15209 634 aa13.24□□□□□ -0.29
LMO7-209ENST00000467686 ATF5Q9Y2D1 282 aaPredicted RBP13.11□□□□□ -0.31
LMO7-209ENST00000467686 POLA2Q14181 598 aa13.07□□□□□ -0.32
LMO7-209ENST00000467686 ATXN8OSP0DMR3 200 aa12.88□□□□□ -0.35
LMO7-209ENST00000467686 CSRNP3Q8WYN3 585 aa12.79□□□□□ -0.36
LMO7-209ENST00000467686 EHMT2Q96KQ7 1210 aa12.76□□□□□ -0.37
LMO7-209ENST00000467686 RBM42Q9BTD8 480 aaKnown RBP12.74□□□□□ -0.37
LMO7-209ENST00000467686 ZBTB12Q9Y330 459 aaPredicted RBP12.73□□□□□ -0.37
LMO7-209ENST00000467686 OSCARQ8IYS5 282 aa12.63□□□□□ -0.39
LMO7-209ENST00000467686 POTEHQ6S545 545 aa12.56□□□□□ -0.4
LMO7-209ENST00000467686 FBLN2P98095 1184 aa12.54□□□□□ -0.4
LMO7-209ENST00000467686 AKT1S1Q96B36 256 aa12.51□□□□□ -0.41
LMO7-209ENST00000467686 MKRN4PQ13434 485 aaPredicted RBP12.49□□□□□ -0.41
LMO7-209ENST00000467686 CHRDL2Q6WN34 429 aa12.43□□□□□ -0.42
LMO7-209ENST00000467686 REM2Q8IYK8 340 aaPredicted RBP12.42□□□□□ -0.42
LMO7-209ENST00000467686 SPDYE2BA6NHP3 402 aa12.38□□□□□ -0.43
LMO7-209ENST00000467686 SPDYE6P0CI01 402 aa12.38□□□□□ -0.43
LMO7-209ENST00000467686 SPDYE2Q495Y8 402 aa12.38□□□□□ -0.43
LMO7-209ENST00000467686 ZNF692Q9BU19 519 aaPredicted RBP12.31□□□□□ -0.44
LMO7-209ENST00000467686 PITPNM1O00562 1244 aa12.28□□□□□ -0.44
LMO7-209ENST00000467686 SSUH2Q9Y2M2 353 aa12.24□□□□□ -0.45
LMO7-209ENST00000467686 PIP4P2Q8N4L2 257 aa12.19□□□□□ -0.46
LMO7-209ENST00000467686 CLEC11AQ9Y240 323 aa12.16□□□□□ -0.46
LMO7-209ENST00000467686 PABPN1Q86U42 306 aaKnown RBP eCLIP12.13□□□□□ -0.47
LMO7-209ENST00000467686 SPDYE1Q8NFV5 336 aaPredicted RBP12.13□□□□□ -0.47
LMO7-209ENST00000467686 FXR2P51116 673 aaKnown RBP eCLIP12.12□□□□□ -0.47
LMO7-209ENST00000467686 SPDYE4A6NLX3 237 aa11.99□□□□□ -0.49
LMO7-209ENST00000467686 PRKAR2AP13861 404 aaKnown RBP11.98□□□□□ -0.49
LMO7-209ENST00000467686 PRR29P0C7W0 189 aa11.96□□□□□ -0.49
LMO7-209ENST00000467686 HAX1O00165 279 aa11.94□□□□□ -0.5
LMO7-209ENST00000467686 CHADLQ6NUI6 762 aa11.92□□□□□ -0.5
LMO7-209ENST00000467686 SP7Q8TDD2 431 aaPredicted RBP11.85□□□□□ -0.51
LMO7-209ENST00000467686 EVX2Q03828 476 aa11.82□□□□□ -0.52
LMO7-209ENST00000467686 STAG3Q9UJ98 1225 aa11.79□□□□□ -0.52
LMO7-209ENST00000467686 C19orf67A6NJJ6 358 aa11.73□□□□□ -0.53
LMO7-209ENST00000467686 FARP1Q9Y4F1 1045 aaPredicted RBP11.72□□□□□ -0.53
LMO7-209ENST00000467686 CREBZFQ9NS37 354 aa11.7□□□□□ -0.54
LMO7-209ENST00000467686 PROM2Q8N271 834 aa11.68□□□□□ -0.54
LMO7-209ENST00000467686 CD44P16070 742 aaKnown RBP11.6□□□□□ -0.55
LMO7-209ENST00000467686 FKBP8Q14318 412 aa11.6□□□□□ -0.55
LMO7-209ENST00000467686 GABBR2O75899 941 aa11.54□□□□□ -0.56
LMO7-209ENST00000467686 MNX1P50219 401 aaPredicted RBP11.51□□□□□ -0.57
LMO7-209ENST00000467686 ZRANB1Q9UGI0 708 aa11.48□□□□□ -0.57
LMO7-209ENST00000467686 NPM1P06748 294 aaKnown RBP eCLIP11.47□□□□□ -0.57
LMO7-209ENST00000467686 MIER1Q8N108 512 aa11.45□□□□□ -0.58
LMO7-209ENST00000467686 ZNF579Q8NAF0 562 aaKnown RBP11.4□□□□□ -0.58
LMO7-209ENST00000467686 PAK3O75914 559 aaPredicted RBP11.39□□□□□ -0.59
LMO7-209ENST00000467686 PLEKHG5O94827 1062 aa11.37□□□□□ -0.59
LMO7-209ENST00000467686 PLCD3Q8N3E9 789 aa11.37□□□□□ -0.59
LMO7-209ENST00000467686 CLCN6P51797 869 aa11.34□□□□□ -0.59
LMO7-209ENST00000467686 PHF12Q96QT6 1004 aa11.34□□□□□ -0.59
LMO7-209ENST00000467686 TSPYL2Q9H2G4 693 aaPredicted RBP11.32□□□□□ -0.6
LMO7-209ENST00000467686 POTEIP0CG38 1075 aa11.3□□□□□ -0.6
LMO7-209ENST00000467686 GALR2O43603 387 aaPredicted RBP11.29□□□□□ -0.6
LMO7-209ENST00000467686 DCBLD2Q96PD2 775 aa11.27□□□□□ -0.61
LMO7-209ENST00000467686 FBXO3Q9UK99 471 aa11.26□□□□□ -0.61
LMO7-209ENST00000467686 RASEFQ8IZ41 740 aa11.25□□□□□ -0.61
LMO7-209ENST00000467686 ZBTB47Q9UFB7 747 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 201.5 ms