RNA–Protein interactions for RNA: ENST00000467677.1

LINC01393-204, Transcript of long intergenic non-protein coding RNA 1393, humanhuman

TSL 2

Gene LINC01393, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01393-204ENST00000467677 AEBP2Q6ZN18 517 aaPredicted RBP32.6■■■□□ 2.81
LINC01393-204ENST00000467677 CHIC1Q5VXU3 224 aa31.22■■■□□ 2.59
LINC01393-204ENST00000467677 SENP3Q9H4L4 574 aaPredicted RBP27.71■■■□□ 2.03
LINC01393-204ENST00000467677 PHF23Q9BUL5 403 aaPredicted RBP27.42■■□□□ 1.98
LINC01393-204ENST00000467677 FOXD1Q16676 465 aa25.82■■□□□ 1.72
LINC01393-204ENST00000467677 PLPPR3Q6T4P5 718 aa25.06■■□□□ 1.6
LINC01393-204ENST00000467677 PPP6R1Q9UPN7 881 aa24.39■■□□□ 1.49
LINC01393-204ENST00000467677 ADRA2BP18089 450 aa24.31■■□□□ 1.48
LINC01393-204ENST00000467677 PIAS4Q8N2W9 510 aaPredicted RBP24.19■■□□□ 1.46
LINC01393-204ENST00000467677 MSH5O43196 834 aa24.02■■□□□ 1.44
LINC01393-204ENST00000467677 POTEDQ86YR6 584 aa23.38■■□□□ 1.33
LINC01393-204ENST00000467677 MAPK8IP2Q13387 824 aaPredicted RBP22.25■■□□□ 1.15
LINC01393-204ENST00000467677 SCAF1Q9H7N4 1312 aaKnown RBP22.19■■□□□ 1.14
LINC01393-204ENST00000467677 DMRT2Q9Y5R5 561 aa22.04■■□□□ 1.12
LINC01393-204ENST00000467677 PPP4R3CPQ6ZMV5 832 aa22.02■■□□□ 1.12
LINC01393-204ENST00000467677 CNKSR2Q8WXI2 1034 aa21.52■■□□□ 1.04
LINC01393-204ENST00000467677 HOXD11P31277 338 aaPredicted RBP21.35■■□□□ 1.01
LINC01393-204ENST00000467677 RNF216Q9NWF9 866 aaPredicted RBP21.26■□□□□ 0.99
LINC01393-204ENST00000467677 NCBP3Q53F19 620 aaKnown RBP21.22■□□□□ 0.99
LINC01393-204ENST00000467677 DCAF8L1A6NGE4 600 aa21.1■□□□□ 0.97
LINC01393-204ENST00000467677 NPM3O75607 178 aaKnown RBP20.97■□□□□ 0.95
LINC01393-204ENST00000467677 KCNA4P22459 653 aa20.85■□□□□ 0.93
LINC01393-204ENST00000467677 RNF39Q9H2S5 420 aa20.54■□□□□ 0.88
LINC01393-204ENST00000467677 DNAJC5BQ9UF47 199 aa20.53■□□□□ 0.88
LINC01393-204ENST00000467677 CACNB1Q02641 598 aaPredicted RBP20.42■□□□□ 0.86
LINC01393-204ENST00000467677 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.32■□□□□ 0.84
LINC01393-204ENST00000467677 C1QBPQ07021 282 aaKnown RBP20.24■□□□□ 0.83
LINC01393-204ENST00000467677 SLC4A2P04920 1241 aa19.97■□□□□ 0.79
LINC01393-204ENST00000467677 U3KPZ7 1027 aaPredicted RBP19.97■□□□□ 0.79
LINC01393-204ENST00000467677 SLC4A1APQ9BWU0 796 aaKnown RBP19.72■□□□□ 0.75
LINC01393-204ENST00000467677 SPINK5Q9NQ38 1064 aaPredicted RBP19.58■□□□□ 0.72
LINC01393-204ENST00000467677 CAPN15O75808 1086 aa19.5■□□□□ 0.71
LINC01393-204ENST00000467677 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.44■□□□□ 0.7
LINC01393-204ENST00000467677 HNRNPUL2Q1KMD3 747 aaKnown RBP19.44■□□□□ 0.7
LINC01393-204ENST00000467677 MYCNP04198 464 aaPredicted RBP19.37■□□□□ 0.69
LINC01393-204ENST00000467677 APLP2Q06481 763 aa19.36■□□□□ 0.69
LINC01393-204ENST00000467677 SAMD1Q6SPF0 538 aaPredicted RBP19.36■□□□□ 0.69
LINC01393-204ENST00000467677 DSG3P32926 999 aa19.34■□□□□ 0.69
LINC01393-204ENST00000467677 FOXD4L1Q9NU39 408 aa19.34■□□□□ 0.69
LINC01393-204ENST00000467677 TRHP20396 242 aaPredicted RBP19.27■□□□□ 0.68
LINC01393-204ENST00000467677 ZNF219Q9P2Y4 722 aaPredicted RBP19.23■□□□□ 0.67
LINC01393-204ENST00000467677 ZBTB22O15209 634 aa19.2■□□□□ 0.66
LINC01393-204ENST00000467677 ABCB7O75027 752 aa19.11■□□□□ 0.65
LINC01393-204ENST00000467677 ATF5Q9Y2D1 282 aaPredicted RBP18.94■□□□□ 0.62
LINC01393-204ENST00000467677 POLA2Q14181 598 aa18.83■□□□□ 0.6
LINC01393-204ENST00000467677 ATXN8OSP0DMR3 200 aa18.69■□□□□ 0.58
LINC01393-204ENST00000467677 CSRNP3Q8WYN3 585 aa18.56■□□□□ 0.56
LINC01393-204ENST00000467677 EHMT2Q96KQ7 1210 aa18.48■□□□□ 0.55
LINC01393-204ENST00000467677 ZBTB12Q9Y330 459 aaPredicted RBP18.44■□□□□ 0.54
LINC01393-204ENST00000467677 RBM42Q9BTD8 480 aaKnown RBP18.41■□□□□ 0.54
LINC01393-204ENST00000467677 OSCARQ8IYS5 282 aa18.23■□□□□ 0.51
LINC01393-204ENST00000467677 POTEHQ6S545 545 aa18.21■□□□□ 0.51
LINC01393-204ENST00000467677 FBLN2P98095 1184 aa18.12■□□□□ 0.49
LINC01393-204ENST00000467677 MKRN4PQ13434 485 aaPredicted RBP18.08■□□□□ 0.48
LINC01393-204ENST00000467677 AKT1S1Q96B36 256 aa18.06■□□□□ 0.48
LINC01393-204ENST00000467677 SPDYE2BA6NHP3 402 aa17.91■□□□□ 0.46
LINC01393-204ENST00000467677 SPDYE6P0CI01 402 aa17.91■□□□□ 0.46
LINC01393-204ENST00000467677 SPDYE2Q495Y8 402 aa17.91■□□□□ 0.46
LINC01393-204ENST00000467677 CHRDL2Q6WN34 429 aa17.91■□□□□ 0.46
LINC01393-204ENST00000467677 REM2Q8IYK8 340 aaPredicted RBP17.91■□□□□ 0.46
LINC01393-204ENST00000467677 ZNF692Q9BU19 519 aaPredicted RBP17.74■□□□□ 0.43
LINC01393-204ENST00000467677 PITPNM1O00562 1244 aa17.73■□□□□ 0.43
LINC01393-204ENST00000467677 SSUH2Q9Y2M2 353 aa17.73■□□□□ 0.43
LINC01393-204ENST00000467677 PIP4P2Q8N4L2 257 aa17.56■□□□□ 0.4
LINC01393-204ENST00000467677 SPDYE1Q8NFV5 336 aaPredicted RBP17.52■□□□□ 0.4
LINC01393-204ENST00000467677 PABPN1Q86U42 306 aaKnown RBP eCLIP17.51■□□□□ 0.39
LINC01393-204ENST00000467677 FXR2P51116 673 aaKnown RBP eCLIP17.5■□□□□ 0.39
LINC01393-204ENST00000467677 CLEC11AQ9Y240 323 aa17.48■□□□□ 0.39
LINC01393-204ENST00000467677 SPDYE4A6NLX3 237 aa17.35■□□□□ 0.37
LINC01393-204ENST00000467677 PRKAR2AP13861 404 aaKnown RBP17.26■□□□□ 0.35
LINC01393-204ENST00000467677 PRR29P0C7W0 189 aa17.23■□□□□ 0.35
LINC01393-204ENST00000467677 CHADLQ6NUI6 762 aa17.15■□□□□ 0.34
LINC01393-204ENST00000467677 HAX1O00165 279 aa17.14■□□□□ 0.33
LINC01393-204ENST00000467677 SP7Q8TDD2 431 aaPredicted RBP17.05■□□□□ 0.32
LINC01393-204ENST00000467677 STAG3Q9UJ98 1225 aa17.05■□□□□ 0.32
LINC01393-204ENST00000467677 PROM2Q8N271 834 aa17■□□□□ 0.31
LINC01393-204ENST00000467677 EVX2Q03828 476 aa16.99■□□□□ 0.31
LINC01393-204ENST00000467677 C19orf67A6NJJ6 358 aa16.93■□□□□ 0.3
LINC01393-204ENST00000467677 FARP1Q9Y4F1 1045 aaPredicted RBP16.91■□□□□ 0.3
LINC01393-204ENST00000467677 CREBZFQ9NS37 354 aa16.9■□□□□ 0.3
LINC01393-204ENST00000467677 FKBP8Q14318 412 aa16.81■□□□□ 0.28
LINC01393-204ENST00000467677 CD44P16070 742 aaKnown RBP16.73■□□□□ 0.27
LINC01393-204ENST00000467677 MNX1P50219 401 aaPredicted RBP16.67■□□□□ 0.26
LINC01393-204ENST00000467677 GABBR2O75899 941 aa16.6■□□□□ 0.25
LINC01393-204ENST00000467677 NPM1P06748 294 aaKnown RBP eCLIP16.56■□□□□ 0.24
LINC01393-204ENST00000467677 ZRANB1Q9UGI0 708 aa16.54■□□□□ 0.24
LINC01393-204ENST00000467677 MIER1Q8N108 512 aa16.5■□□□□ 0.23
LINC01393-204ENST00000467677 ZNF579Q8NAF0 562 aaKnown RBP16.49■□□□□ 0.23
LINC01393-204ENST00000467677 PAK3O75914 559 aaPredicted RBP16.44■□□□□ 0.22
LINC01393-204ENST00000467677 PLEKHG5O94827 1062 aa16.43■□□□□ 0.22
LINC01393-204ENST00000467677 PLCD3Q8N3E9 789 aa16.41■□□□□ 0.22
LINC01393-204ENST00000467677 CLCN6P51797 869 aa16.4■□□□□ 0.22
LINC01393-204ENST00000467677 PHF12Q96QT6 1004 aa16.36■□□□□ 0.21
LINC01393-204ENST00000467677 FBXO3Q9UK99 471 aa16.33■□□□□ 0.2
LINC01393-204ENST00000467677 TSPYL2Q9H2G4 693 aaPredicted RBP16.3■□□□□ 0.2
LINC01393-204ENST00000467677 GALR2O43603 387 aaPredicted RBP16.28■□□□□ 0.2
LINC01393-204ENST00000467677 POTEIP0CG38 1075 aa16.28■□□□□ 0.2
LINC01393-204ENST00000467677 RASEFQ8IZ41 740 aa16.26■□□□□ 0.19
LINC01393-204ENST00000467677 ZBTB47Q9UFB7 747 aaPredicted RBP16.25■□□□□ 0.19
LINC01393-204ENST00000467677 CCDC61Q9Y6R9 512 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms