RNA–Protein interactions for RNA: ENST00000467356.5

JMJD1C-204, Transcript of jumonji domain containing 1C, humanhuman

TSL 1 (best)

Gene JMJD1C, Length 1,305 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
JMJD1C-204ENST00000467356 AEBP2Q6ZN18 517 aaPredicted RBP31.58■■■□□ 2.65
JMJD1C-204ENST00000467356 CHIC1Q5VXU3 224 aa29.66■■■□□ 2.34
JMJD1C-204ENST00000467356 SENP3Q9H4L4 574 aaPredicted RBP26.84■■□□□ 1.89
JMJD1C-204ENST00000467356 PHF23Q9BUL5 403 aaPredicted RBP26.51■■□□□ 1.83
JMJD1C-204ENST00000467356 FOXD1Q16676 465 aa25.13■■□□□ 1.61
JMJD1C-204ENST00000467356 PLPPR3Q6T4P5 718 aa23.53■■□□□ 1.36
JMJD1C-204ENST00000467356 MSH5O43196 834 aa23.5■■□□□ 1.35
JMJD1C-204ENST00000467356 POTEDQ86YR6 584 aa23.48■■□□□ 1.35
JMJD1C-204ENST00000467356 PIAS4Q8N2W9 510 aaPredicted RBP23.39■■□□□ 1.34
JMJD1C-204ENST00000467356 PPP6R1Q9UPN7 881 aa23.36■■□□□ 1.33
JMJD1C-204ENST00000467356 ADRA2BP18089 450 aa23.26■■□□□ 1.31
JMJD1C-204ENST00000467356 MAPK8IP2Q13387 824 aaPredicted RBP21.46■■□□□ 1.03
JMJD1C-204ENST00000467356 DMRT2Q9Y5R5 561 aa21.28■■□□□ 1
JMJD1C-204ENST00000467356 SCAF1Q9H7N4 1312 aaKnown RBP21.09■□□□□ 0.97
JMJD1C-204ENST00000467356 PPP4R3CPQ6ZMV5 832 aa20.64■□□□□ 0.89
JMJD1C-204ENST00000467356 DCAF8L1A6NGE4 600 aa20.44■□□□□ 0.86
JMJD1C-204ENST00000467356 HOXD11P31277 338 aaPredicted RBP20.38■□□□□ 0.85
JMJD1C-204ENST00000467356 CACNB1Q02641 598 aaPredicted RBP20.37■□□□□ 0.85
JMJD1C-204ENST00000467356 CNKSR2Q8WXI2 1034 aa20.27■□□□□ 0.83
JMJD1C-204ENST00000467356 RNF216Q9NWF9 866 aaPredicted RBP20.14■□□□□ 0.81
JMJD1C-204ENST00000467356 RNF39Q9H2S5 420 aa20.09■□□□□ 0.81
JMJD1C-204ENST00000467356 C1QBPQ07021 282 aaKnown RBP19.73■□□□□ 0.75
JMJD1C-204ENST00000467356 NCBP3Q53F19 620 aaKnown RBP19.68■□□□□ 0.74
JMJD1C-204ENST00000467356 DNAJC5BQ9UF47 199 aa19.63■□□□□ 0.73
JMJD1C-204ENST00000467356 NPM3O75607 178 aaKnown RBP19.51■□□□□ 0.71
JMJD1C-204ENST00000467356 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.42■□□□□ 0.7
JMJD1C-204ENST00000467356 U3KPZ7 1027 aaPredicted RBP19.04■□□□□ 0.64
JMJD1C-204ENST00000467356 KCNA4P22459 653 aa18.96■□□□□ 0.63
JMJD1C-204ENST00000467356 SPINK5Q9NQ38 1064 aaPredicted RBP18.87■□□□□ 0.61
JMJD1C-204ENST00000467356 CAPN15O75808 1086 aa18.78■□□□□ 0.6
JMJD1C-204ENST00000467356 DSG3P32926 999 aa18.74■□□□□ 0.59
JMJD1C-204ENST00000467356 SLC4A2P04920 1241 aa18.73■□□□□ 0.59
JMJD1C-204ENST00000467356 TRHP20396 242 aaPredicted RBP18.44■□□□□ 0.54
JMJD1C-204ENST00000467356 ABCB7O75027 752 aa18.39■□□□□ 0.53
JMJD1C-204ENST00000467356 POTEHQ6S545 545 aa18.31■□□□□ 0.52
JMJD1C-204ENST00000467356 ZNF219Q9P2Y4 722 aaPredicted RBP18.3■□□□□ 0.52
JMJD1C-204ENST00000467356 APLP2Q06481 763 aa18.29■□□□□ 0.52
JMJD1C-204ENST00000467356 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.24■□□□□ 0.51
JMJD1C-204ENST00000467356 HNRNPUL2Q1KMD3 747 aaKnown RBP18.24■□□□□ 0.51
JMJD1C-204ENST00000467356 SAMD1Q6SPF0 538 aaPredicted RBP18.18■□□□□ 0.5
JMJD1C-204ENST00000467356 MYCNP04198 464 aaPredicted RBP17.98■□□□□ 0.47
JMJD1C-204ENST00000467356 POLA2Q14181 598 aa17.88■□□□□ 0.45
JMJD1C-204ENST00000467356 RBM42Q9BTD8 480 aaKnown RBP17.79■□□□□ 0.44
JMJD1C-204ENST00000467356 SLC4A1APQ9BWU0 796 aaKnown RBP17.78■□□□□ 0.44
JMJD1C-204ENST00000467356 ATF5Q9Y2D1 282 aaPredicted RBP17.72■□□□□ 0.43
JMJD1C-204ENST00000467356 FOXD4L1Q9NU39 408 aa17.69■□□□□ 0.42
JMJD1C-204ENST00000467356 CHRDL2Q6WN34 429 aa17.58■□□□□ 0.4
JMJD1C-204ENST00000467356 ZBTB22O15209 634 aa17.47■□□□□ 0.39
JMJD1C-204ENST00000467356 ZBTB12Q9Y330 459 aaPredicted RBP17.38■□□□□ 0.37
JMJD1C-204ENST00000467356 AKT1S1Q96B36 256 aa17.37■□□□□ 0.37
JMJD1C-204ENST00000467356 OSCARQ8IYS5 282 aa17.36■□□□□ 0.37
JMJD1C-204ENST00000467356 REM2Q8IYK8 340 aaPredicted RBP17.26■□□□□ 0.35
JMJD1C-204ENST00000467356 PIP4P2Q8N4L2 257 aa17.14■□□□□ 0.33
JMJD1C-204ENST00000467356 PITPNM1O00562 1244 aa17.11■□□□□ 0.33
JMJD1C-204ENST00000467356 ATXN8OSP0DMR3 200 aa17.1■□□□□ 0.33
JMJD1C-204ENST00000467356 SP7Q8TDD2 431 aaPredicted RBP17.04■□□□□ 0.32
JMJD1C-204ENST00000467356 FXR2P51116 673 aaKnown RBP eCLIP16.97■□□□□ 0.31
JMJD1C-204ENST00000467356 FBLN2P98095 1184 aa16.9■□□□□ 0.3
JMJD1C-204ENST00000467356 SPDYE2BA6NHP3 402 aa16.88■□□□□ 0.29
JMJD1C-204ENST00000467356 SPDYE6P0CI01 402 aa16.88■□□□□ 0.29
JMJD1C-204ENST00000467356 MKRN4PQ13434 485 aaPredicted RBP16.88■□□□□ 0.29
JMJD1C-204ENST00000467356 SPDYE2Q495Y8 402 aa16.88■□□□□ 0.29
JMJD1C-204ENST00000467356 HAX1O00165 279 aa16.87■□□□□ 0.29
JMJD1C-204ENST00000467356 EVX2Q03828 476 aa16.74■□□□□ 0.27
JMJD1C-204ENST00000467356 CLEC11AQ9Y240 323 aa16.69■□□□□ 0.26
JMJD1C-204ENST00000467356 SSUH2Q9Y2M2 353 aa16.68■□□□□ 0.26
JMJD1C-204ENST00000467356 ZNF692Q9BU19 519 aaPredicted RBP16.66■□□□□ 0.26
JMJD1C-204ENST00000467356 SPDYE1Q8NFV5 336 aaPredicted RBP16.65■□□□□ 0.26
JMJD1C-204ENST00000467356 PRKAR2AP13861 404 aaKnown RBP16.64■□□□□ 0.25
JMJD1C-204ENST00000467356 CHADLQ6NUI6 762 aa16.45■□□□□ 0.22
JMJD1C-204ENST00000467356 C19orf67A6NJJ6 358 aa16.45■□□□□ 0.22
JMJD1C-204ENST00000467356 PABPN1Q86U42 306 aaKnown RBP eCLIP16.45■□□□□ 0.22
JMJD1C-204ENST00000467356 CSRNP3Q8WYN3 585 aa16.39■□□□□ 0.21
JMJD1C-204ENST00000467356 PRR29P0C7W0 189 aa16.33■□□□□ 0.2
JMJD1C-204ENST00000467356 GABBR2O75899 941 aa16.27■□□□□ 0.2
JMJD1C-204ENST00000467356 FARP1Q9Y4F1 1045 aaPredicted RBP16.12■□□□□ 0.17
JMJD1C-204ENST00000467356 CD44P16070 742 aaKnown RBP16.08■□□□□ 0.16
JMJD1C-204ENST00000467356 EHMT2Q96KQ7 1210 aa16.05■□□□□ 0.16
JMJD1C-204ENST00000467356 POTEIP0CG38 1075 aa15.99■□□□□ 0.15
JMJD1C-204ENST00000467356 LHX8Q68G74 356 aa15.98■□□□□ 0.15
JMJD1C-204ENST00000467356 CREBZFQ9NS37 354 aa15.94■□□□□ 0.14
JMJD1C-204ENST00000467356 SPDYE4A6NLX3 237 aa15.88■□□□□ 0.13
JMJD1C-204ENST00000467356 ZRANB1Q9UGI0 708 aa15.83■□□□□ 0.12
JMJD1C-204ENST00000467356 STAG3Q9UJ98 1225 aa15.83■□□□□ 0.12
JMJD1C-204ENST00000467356 ZNF579Q8NAF0 562 aaKnown RBP15.81■□□□□ 0.12
JMJD1C-204ENST00000467356 CLCN6P51797 869 aa15.75■□□□□ 0.11
JMJD1C-204ENST00000467356 DCBLD2Q96PD2 775 aa15.73■□□□□ 0.11
JMJD1C-204ENST00000467356 GALR2O43603 387 aaPredicted RBP15.7■□□□□ 0.1
JMJD1C-204ENST00000467356 PHF12Q96QT6 1004 aa15.65■□□□□ 0.1
JMJD1C-204ENST00000467356 MNX1P50219 401 aaPredicted RBP15.64■□□□□ 0.09
JMJD1C-204ENST00000467356 PAK3O75914 559 aaPredicted RBP15.55■□□□□ 0.08
JMJD1C-204ENST00000467356 NPM1P06748 294 aaKnown RBP eCLIP15.52■□□□□ 0.08
JMJD1C-204ENST00000467356 POTEB2H3BUK9 544 aa15.47■□□□□ 0.07
JMJD1C-204ENST00000467356 PROM2Q8N271 834 aa15.46■□□□□ 0.07
JMJD1C-204ENST00000467356 PELP1Q8IZL8 1130 aaKnown RBP15.45■□□□□ 0.06
JMJD1C-204ENST00000467356 OTUD5Q96G74 571 aa15.42■□□□□ 0.06
JMJD1C-204ENST00000467356 MS4A3Q96HJ5 214 aa15.41■□□□□ 0.06
JMJD1C-204ENST00000467356 TSPYL2Q9H2G4 693 aaPredicted RBP15.35■□□□□ 0.05
JMJD1C-204ENST00000467356 ATMINO43313 823 aaPredicted RBP15.29■□□□□ 0.04
JMJD1C-204ENST00000467356 ASTLQ6HA08 431 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms