RNA–Protein interactions for RNA: ENST00000467352.1

GTDC1-213, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 4

Gene GTDC1, Length 792 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-213ENST00000467352 AEBP2Q6ZN18 517 aaPredicted RBP24.18■■□□□ 1.46
GTDC1-213ENST00000467352 CHIC1Q5VXU3 224 aa22.68■■□□□ 1.22
GTDC1-213ENST00000467352 SENP3Q9H4L4 574 aaPredicted RBP20.75■□□□□ 0.91
GTDC1-213ENST00000467352 PHF23Q9BUL5 403 aaPredicted RBP20.42■□□□□ 0.86
GTDC1-213ENST00000467352 FOXD1Q16676 465 aa19.34■□□□□ 0.69
GTDC1-213ENST00000467352 POTEDQ86YR6 584 aa18.46■□□□□ 0.55
GTDC1-213ENST00000467352 MSH5O43196 834 aa18.3■□□□□ 0.52
GTDC1-213ENST00000467352 PIAS4Q8N2W9 510 aaPredicted RBP18.03■□□□□ 0.48
GTDC1-213ENST00000467352 PLPPR3Q6T4P5 718 aa17.95■□□□□ 0.46
GTDC1-213ENST00000467352 PPP6R1Q9UPN7 881 aa17.79■□□□□ 0.44
GTDC1-213ENST00000467352 ADRA2BP18089 450 aa17.73■□□□□ 0.43
GTDC1-213ENST00000467352 MAPK8IP2Q13387 824 aaPredicted RBP16.4■□□□□ 0.22
GTDC1-213ENST00000467352 DMRT2Q9Y5R5 561 aa16.37■□□□□ 0.21
GTDC1-213ENST00000467352 SCAF1Q9H7N4 1312 aaKnown RBP16.32■□□□□ 0.2
GTDC1-213ENST00000467352 CACNB1Q02641 598 aaPredicted RBP15.96■□□□□ 0.15
GTDC1-213ENST00000467352 DCAF8L1A6NGE4 600 aa15.81■□□□□ 0.12
GTDC1-213ENST00000467352 PPP4R3CPQ6ZMV5 832 aa15.68■□□□□ 0.1
GTDC1-213ENST00000467352 HOXD11P31277 338 aaPredicted RBP15.61■□□□□ 0.09
GTDC1-213ENST00000467352 RNF39Q9H2S5 420 aa15.55■□□□□ 0.08
GTDC1-213ENST00000467352 CNKSR2Q8WXI2 1034 aa15.48■□□□□ 0.07
GTDC1-213ENST00000467352 RNF216Q9NWF9 866 aaPredicted RBP15.42■□□□□ 0.06
GTDC1-213ENST00000467352 C1QBPQ07021 282 aaKnown RBP15.33■□□□□ 0.04
GTDC1-213ENST00000467352 DNAJC5BQ9UF47 199 aa15.16■□□□□ 0.02
GTDC1-213ENST00000467352 NCBP3Q53F19 620 aaKnown RBP15.02■□□□□ -0
GTDC1-213ENST00000467352 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.96□□□□□ -0.01
GTDC1-213ENST00000467352 NPM3O75607 178 aaKnown RBP14.72□□□□□ -0.05
GTDC1-213ENST00000467352 U3KPZ7 1027 aaPredicted RBP14.52□□□□□ -0.09
GTDC1-213ENST00000467352 CAPN15O75808 1086 aa14.49□□□□□ -0.09
GTDC1-213ENST00000467352 DSG3P32926 999 aa14.43□□□□□ -0.1
GTDC1-213ENST00000467352 SPINK5Q9NQ38 1064 aaPredicted RBP14.43□□□□□ -0.1
GTDC1-213ENST00000467352 POTEHQ6S545 545 aa14.41□□□□□ -0.1
GTDC1-213ENST00000467352 APLP2Q06481 763 aa14.18□□□□□ -0.14
GTDC1-213ENST00000467352 TRHP20396 242 aaPredicted RBP14.16□□□□□ -0.14
GTDC1-213ENST00000467352 SLC4A2P04920 1241 aa14.13□□□□□ -0.15
GTDC1-213ENST00000467352 ZNF219Q9P2Y4 722 aaPredicted RBP14.11□□□□□ -0.15
GTDC1-213ENST00000467352 KCNA4P22459 653 aa14.1□□□□□ -0.15
GTDC1-213ENST00000467352 ABCB7O75027 752 aa14.09□□□□□ -0.15
GTDC1-213ENST00000467352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.06□□□□□ -0.16
GTDC1-213ENST00000467352 HNRNPUL2Q1KMD3 747 aaKnown RBP14.06□□□□□ -0.16
GTDC1-213ENST00000467352 SAMD1Q6SPF0 538 aaPredicted RBP13.95□□□□□ -0.18
GTDC1-213ENST00000467352 RBM42Q9BTD8 480 aaKnown RBP13.84□□□□□ -0.19
GTDC1-213ENST00000467352 POLA2Q14181 598 aa13.68□□□□□ -0.22
GTDC1-213ENST00000467352 MYCNP04198 464 aaPredicted RBP13.65□□□□□ -0.22
GTDC1-213ENST00000467352 CHRDL2Q6WN34 429 aa13.65□□□□□ -0.22
GTDC1-213ENST00000467352 AKT1S1Q96B36 256 aa13.42□□□□□ -0.26
GTDC1-213ENST00000467352 ZBTB12Q9Y330 459 aaPredicted RBP13.4□□□□□ -0.26
GTDC1-213ENST00000467352 SP7Q8TDD2 431 aaPredicted RBP13.34□□□□□ -0.27
GTDC1-213ENST00000467352 ATF5Q9Y2D1 282 aaPredicted RBP13.32□□□□□ -0.28
GTDC1-213ENST00000467352 FOXD4L1Q9NU39 408 aa13.3□□□□□ -0.28
GTDC1-213ENST00000467352 REM2Q8IYK8 340 aaPredicted RBP13.28□□□□□ -0.28
GTDC1-213ENST00000467352 SLC4A1APQ9BWU0 796 aaKnown RBP13.28□□□□□ -0.28
GTDC1-213ENST00000467352 OSCARQ8IYS5 282 aa13.24□□□□□ -0.29
GTDC1-213ENST00000467352 PIP4P2Q8N4L2 257 aa13.24□□□□□ -0.29
GTDC1-213ENST00000467352 HAX1O00165 279 aa13.16□□□□□ -0.3
GTDC1-213ENST00000467352 PITPNM1O00562 1244 aa13.13□□□□□ -0.31
GTDC1-213ENST00000467352 FXR2P51116 673 aaKnown RBP eCLIP13.09□□□□□ -0.31
GTDC1-213ENST00000467352 ATXN8OSP0DMR3 200 aa12.94□□□□□ -0.34
GTDC1-213ENST00000467352 SPDYE2BA6NHP3 402 aa12.93□□□□□ -0.34
GTDC1-213ENST00000467352 SPDYE6P0CI01 402 aa12.93□□□□□ -0.34
GTDC1-213ENST00000467352 SPDYE2Q495Y8 402 aa12.93□□□□□ -0.34
GTDC1-213ENST00000467352 ZBTB22O15209 634 aa12.92□□□□□ -0.34
GTDC1-213ENST00000467352 FBLN2P98095 1184 aa12.92□□□□□ -0.34
GTDC1-213ENST00000467352 EVX2Q03828 476 aa12.87□□□□□ -0.35
GTDC1-213ENST00000467352 CLEC11AQ9Y240 323 aa12.83□□□□□ -0.36
GTDC1-213ENST00000467352 PRKAR2AP13861 404 aaKnown RBP12.82□□□□□ -0.36
GTDC1-213ENST00000467352 SPDYE1Q8NFV5 336 aaPredicted RBP12.81□□□□□ -0.36
GTDC1-213ENST00000467352 ZNF692Q9BU19 519 aaPredicted RBP12.74□□□□□ -0.37
GTDC1-213ENST00000467352 C19orf67A6NJJ6 358 aa12.68□□□□□ -0.38
GTDC1-213ENST00000467352 MKRN4PQ13434 485 aaPredicted RBP12.68□□□□□ -0.38
GTDC1-213ENST00000467352 SSUH2Q9Y2M2 353 aa12.67□□□□□ -0.38
GTDC1-213ENST00000467352 GABBR2O75899 941 aa12.61□□□□□ -0.39
GTDC1-213ENST00000467352 CHADLQ6NUI6 762 aa12.58□□□□□ -0.4
GTDC1-213ENST00000467352 PRR29P0C7W0 189 aa12.57□□□□□ -0.4
GTDC1-213ENST00000467352 LHX8Q68G74 356 aa12.52□□□□□ -0.41
GTDC1-213ENST00000467352 PABPN1Q86U42 306 aaKnown RBP eCLIP12.52□□□□□ -0.41
GTDC1-213ENST00000467352 CD44P16070 742 aaKnown RBP12.39□□□□□ -0.43
GTDC1-213ENST00000467352 FARP1Q9Y4F1 1045 aaPredicted RBP12.36□□□□□ -0.43
GTDC1-213ENST00000467352 CLCN6P51797 869 aa12.32□□□□□ -0.44
GTDC1-213ENST00000467352 POTEIP0CG38 1075 aa12.29□□□□□ -0.44
GTDC1-213ENST00000467352 DCBLD2Q96PD2 775 aa12.25□□□□□ -0.45
GTDC1-213ENST00000467352 ZRANB1Q9UGI0 708 aa12.17□□□□□ -0.46
GTDC1-213ENST00000467352 ZNF579Q8NAF0 562 aaKnown RBP12.15□□□□□ -0.46
GTDC1-213ENST00000467352 STAG3Q9UJ98 1225 aa12.13□□□□□ -0.47
GTDC1-213ENST00000467352 CREBZFQ9NS37 354 aa12.1□□□□□ -0.47
GTDC1-213ENST00000467352 PLSCR2Q9NRY7 297 aa12.07□□□□□ -0.48
GTDC1-213ENST00000467352 GALR2O43603 387 aaPredicted RBP12.03□□□□□ -0.48
GTDC1-213ENST00000467352 PAK3O75914 559 aaPredicted RBP12.03□□□□□ -0.48
GTDC1-213ENST00000467352 CSRNP3Q8WYN3 585 aa12.02□□□□□ -0.49
GTDC1-213ENST00000467352 SPDYE4A6NLX3 237 aa11.96□□□□□ -0.49
GTDC1-213ENST00000467352 NPM1P06748 294 aaKnown RBP eCLIP11.94□□□□□ -0.5
GTDC1-213ENST00000467352 OTUD5Q96G74 571 aa11.94□□□□□ -0.5
GTDC1-213ENST00000467352 PHF12Q96QT6 1004 aa11.93□□□□□ -0.5
GTDC1-213ENST00000467352 POTEB2H3BUK9 544 aa11.88□□□□□ -0.51
GTDC1-213ENST00000467352 MNX1P50219 401 aaPredicted RBP11.81□□□□□ -0.52
GTDC1-213ENST00000467352 PELP1Q8IZL8 1130 aaKnown RBP11.81□□□□□ -0.52
GTDC1-213ENST00000467352 POTEMA6NI47 508 aa11.8□□□□□ -0.52
GTDC1-213ENST00000467352 METRNQ9UJH8 293 aa11.77□□□□□ -0.53
GTDC1-213ENST00000467352 POTEGQ6S5H5 508 aa11.76□□□□□ -0.53
GTDC1-213ENST00000467352 C7P10643 843 aa11.75□□□□□ -0.53
GTDC1-213ENST00000467352 ASTLQ6HA08 431 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms