RNA–Protein interactions for RNA: ENST00000466770.1

STRADB-206, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 2

Gene STRADB, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-206ENST00000466770 AEBP2Q6ZN18 517 aaPredicted RBP22.75■■□□□ 1.23
STRADB-206ENST00000466770 CHIC1Q5VXU3 224 aa22.4■■□□□ 1.18
STRADB-206ENST00000466770 PHF23Q9BUL5 403 aaPredicted RBP19.81■□□□□ 0.76
STRADB-206ENST00000466770 SENP3Q9H4L4 574 aaPredicted RBP19.13■□□□□ 0.65
STRADB-206ENST00000466770 PLPPR3Q6T4P5 718 aa18.24■□□□□ 0.51
STRADB-206ENST00000466770 FOXD1Q16676 465 aa17.81■□□□□ 0.44
STRADB-206ENST00000466770 PPP6R1Q9UPN7 881 aa17.4■□□□□ 0.38
STRADB-206ENST00000466770 ADRA2BP18089 450 aa17.35■□□□□ 0.37
STRADB-206ENST00000466770 PIAS4Q8N2W9 510 aaPredicted RBP16.78■□□□□ 0.28
STRADB-206ENST00000466770 MSH5O43196 834 aa16.21■□□□□ 0.19
STRADB-206ENST00000466770 PPP4R3CPQ6ZMV5 832 aa16.15■□□□□ 0.18
STRADB-206ENST00000466770 KCNA4P22459 653 aa16.11■□□□□ 0.17
STRADB-206ENST00000466770 SCAF1Q9H7N4 1312 aaKnown RBP15.73■□□□□ 0.11
STRADB-206ENST00000466770 NCBP3Q53F19 620 aaKnown RBP15.71■□□□□ 0.11
STRADB-206ENST00000466770 MAPK8IP2Q13387 824 aaPredicted RBP15.7■□□□□ 0.1
STRADB-206ENST00000466770 CNKSR2Q8WXI2 1034 aa15.61■□□□□ 0.09
STRADB-206ENST00000466770 NPM3O75607 178 aaKnown RBP15.59■□□□□ 0.09
STRADB-206ENST00000466770 DMRT2Q9Y5R5 561 aa15.35■□□□□ 0.05
STRADB-206ENST00000466770 SLC4A1APQ9BWU0 796 aaKnown RBP15.32■□□□□ 0.04
STRADB-206ENST00000466770 RNF216Q9NWF9 866 aaPredicted RBP15.26■□□□□ 0.03
STRADB-206ENST00000466770 EHMT2Q96KQ7 1210 aa15.18■□□□□ 0.02
STRADB-206ENST00000466770 HOXD11P31277 338 aaPredicted RBP15.16■□□□□ 0.02
STRADB-206ENST00000466770 DNAJC5BQ9UF47 199 aa15.13■□□□□ 0.01
STRADB-206ENST00000466770 CSRNP3Q8WYN3 585 aa14.98□□□□□ -0.01
STRADB-206ENST00000466770 ZBTB22O15209 634 aa14.88□□□□□ -0.03
STRADB-206ENST00000466770 SLC4A2P04920 1241 aa14.71□□□□□ -0.05
STRADB-206ENST00000466770 FOXD4L1Q9NU39 408 aa14.68□□□□□ -0.06
STRADB-206ENST00000466770 DCAF8L1A6NGE4 600 aa14.58□□□□□ -0.08
STRADB-206ENST00000466770 POTEDQ86YR6 584 aa14.39□□□□□ -0.11
STRADB-206ENST00000466770 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.36□□□□□ -0.11
STRADB-206ENST00000466770 MYCNP04198 464 aaPredicted RBP14.33□□□□□ -0.12
STRADB-206ENST00000466770 U3KPZ7 1027 aaPredicted RBP14.24□□□□□ -0.13
STRADB-206ENST00000466770 ATXN8OSP0DMR3 200 aa14.14□□□□□ -0.15
STRADB-206ENST00000466770 ATF5Q9Y2D1 282 aaPredicted RBP14.06□□□□□ -0.16
STRADB-206ENST00000466770 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.02□□□□□ -0.17
STRADB-206ENST00000466770 HNRNPUL2Q1KMD3 747 aaKnown RBP14.02□□□□□ -0.17
STRADB-206ENST00000466770 SAMD1Q6SPF0 538 aaPredicted RBP14.01□□□□□ -0.17
STRADB-206ENST00000466770 RNF39Q9H2S5 420 aa13.99□□□□□ -0.17
STRADB-206ENST00000466770 C1QBPQ07021 282 aaKnown RBP13.79□□□□□ -0.2
STRADB-206ENST00000466770 SPINK5Q9NQ38 1064 aaPredicted RBP13.78□□□□□ -0.2
STRADB-206ENST00000466770 APLP2Q06481 763 aa13.77□□□□□ -0.21
STRADB-206ENST00000466770 ZNF219Q9P2Y4 722 aaPredicted RBP13.72□□□□□ -0.21
STRADB-206ENST00000466770 TRHP20396 242 aaPredicted RBP13.63□□□□□ -0.23
STRADB-206ENST00000466770 CAPN15O75808 1086 aa13.61□□□□□ -0.23
STRADB-206ENST00000466770 POLA2Q14181 598 aa13.51□□□□□ -0.25
STRADB-206ENST00000466770 MKRN4PQ13434 485 aaPredicted RBP13.45□□□□□ -0.26
STRADB-206ENST00000466770 FKBP8Q14318 412 aa13.44□□□□□ -0.26
STRADB-206ENST00000466770 ABCB7O75027 752 aa13.43□□□□□ -0.26
STRADB-206ENST00000466770 DSG3P32926 999 aa13.41□□□□□ -0.26
STRADB-206ENST00000466770 CACNB1Q02641 598 aaPredicted RBP13.37□□□□□ -0.27
STRADB-206ENST00000466770 FBLN2P98095 1184 aa13.28□□□□□ -0.28
STRADB-206ENST00000466770 ZBTB12Q9Y330 459 aaPredicted RBP13.2□□□□□ -0.3
STRADB-206ENST00000466770 SPDYE4A6NLX3 237 aa13.17□□□□□ -0.3
STRADB-206ENST00000466770 PROM2Q8N271 834 aa13.08□□□□□ -0.32
STRADB-206ENST00000466770 OSCARQ8IYS5 282 aa13.03□□□□□ -0.32
STRADB-206ENST00000466770 SPDYE2BA6NHP3 402 aa12.93□□□□□ -0.34
STRADB-206ENST00000466770 SPDYE6P0CI01 402 aa12.93□□□□□ -0.34
STRADB-206ENST00000466770 SPDYE2Q495Y8 402 aa12.93□□□□□ -0.34
STRADB-206ENST00000466770 ZNF692Q9BU19 519 aaPredicted RBP12.92□□□□□ -0.34
STRADB-206ENST00000466770 SSUH2Q9Y2M2 353 aa12.91□□□□□ -0.34
STRADB-206ENST00000466770 FBXO3Q9UK99 471 aa12.83□□□□□ -0.36
STRADB-206ENST00000466770 PABPN1Q86U42 306 aaKnown RBP eCLIP12.78□□□□□ -0.36
STRADB-206ENST00000466770 RTN4Q9NQC3 1192 aaKnown RBP12.73□□□□□ -0.37
STRADB-206ENST00000466770 VASPP50552 380 aaPredicted RBP12.71□□□□□ -0.37
STRADB-206ENST00000466770 AMER1Q5JTC6 1135 aaPredicted RBP12.66□□□□□ -0.38
STRADB-206ENST00000466770 RBM42Q9BTD8 480 aaKnown RBP12.66□□□□□ -0.38
STRADB-206ENST00000466770 IFNLR1Q8IU57 520 aaPredicted RBP12.62□□□□□ -0.39
STRADB-206ENST00000466770 AKT1S1Q96B36 256 aa12.61□□□□□ -0.39
STRADB-206ENST00000466770 STAG3Q9UJ98 1225 aa12.6□□□□□ -0.39
STRADB-206ENST00000466770 REM2Q8IYK8 340 aaPredicted RBP12.53□□□□□ -0.4
STRADB-206ENST00000466770 SPDYE1Q8NFV5 336 aaPredicted RBP12.46□□□□□ -0.41
STRADB-206ENST00000466770 MIER1Q8N108 512 aa12.44□□□□□ -0.42
STRADB-206ENST00000466770 PLCD3Q8N3E9 789 aa12.42□□□□□ -0.42
STRADB-206ENST00000466770 CLEC11AQ9Y240 323 aa12.4□□□□□ -0.42
STRADB-206ENST00000466770 PITPNM1O00562 1244 aa12.38□□□□□ -0.43
STRADB-206ENST00000466770 KLHL34Q8N239 644 aa12.37□□□□□ -0.43
STRADB-206ENST00000466770 SPOCK2Q92563 424 aa12.35□□□□□ -0.43
STRADB-206ENST00000466770 PRR29P0C7W0 189 aa12.33□□□□□ -0.44
STRADB-206ENST00000466770 CREBZFQ9NS37 354 aa12.32□□□□□ -0.44
STRADB-206ENST00000466770 PKD2Q13563 968 aa12.31□□□□□ -0.44
STRADB-206ENST00000466770 MNX1P50219 401 aaPredicted RBP12.26□□□□□ -0.45
STRADB-206ENST00000466770 PLEKHG5O94827 1062 aa12.25□□□□□ -0.45
STRADB-206ENST00000466770 ZBTB47Q9UFB7 747 aaPredicted RBP12.23□□□□□ -0.45
STRADB-206ENST00000466770 NUBP1P53384 320 aa12.18□□□□□ -0.46
STRADB-206ENST00000466770 CHADLQ6NUI6 762 aa12.14□□□□□ -0.47
STRADB-206ENST00000466770 FXR2P51116 673 aaKnown RBP eCLIP12.12□□□□□ -0.47
STRADB-206ENST00000466770 ECM2O94769 699 aaPredicted RBP12.09□□□□□ -0.47
STRADB-206ENST00000466770 CHRDL2Q6WN34 429 aa12.09□□□□□ -0.47
STRADB-206ENST00000466770 CIZ1Q9ULV3 898 aaPredicted RBP12.09□□□□□ -0.47
STRADB-206ENST00000466770 RASEFQ8IZ41 740 aa12.06□□□□□ -0.48
STRADB-206ENST00000466770 PRKAR2AP13861 404 aaKnown RBP12.04□□□□□ -0.48
STRADB-206ENST00000466770 RGL2O15211 777 aa12.03□□□□□ -0.48
STRADB-206ENST00000466770 FARP1Q9Y4F1 1045 aaPredicted RBP12.03□□□□□ -0.48
STRADB-206ENST00000466770 PIP4P2Q8N4L2 257 aa12.02□□□□□ -0.49
STRADB-206ENST00000466770 GSE1Q14687 1217 aa12.01□□□□□ -0.49
STRADB-206ENST00000466770 DCAF8Q5TAQ9 597 aa12.01□□□□□ -0.49
STRADB-206ENST00000466770 NPM1P06748 294 aaKnown RBP eCLIP12□□□□□ -0.49
STRADB-206ENST00000466770 TRIM41Q8WV44 630 aa11.96□□□□□ -0.49
STRADB-206ENST00000466770 FAM212AQ96EL1 285 aa11.96□□□□□ -0.49
STRADB-206ENST00000466770 DCAF8L2P0C7V8 631 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms