RNA–Protein interactions for RNA: ENST00000466555.1

TM9SF2-203, Transcript of transmembrane 9 superfamily member 2, humanhuman

TSL 2

Gene TM9SF2, Length 461 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-203ENST00000466555 AEBP2Q6ZN18 517 aaPredicted RBP21.16■□□□□ 0.98
TM9SF2-203ENST00000466555 CHIC1Q5VXU3 224 aa20.46■□□□□ 0.87
TM9SF2-203ENST00000466555 PHF23Q9BUL5 403 aaPredicted RBP17.99■□□□□ 0.47
TM9SF2-203ENST00000466555 SENP3Q9H4L4 574 aaPredicted RBP17.96■□□□□ 0.47
TM9SF2-203ENST00000466555 FOXD1Q16676 465 aa16.72■□□□□ 0.27
TM9SF2-203ENST00000466555 PLPPR3Q6T4P5 718 aa16.52■□□□□ 0.24
TM9SF2-203ENST00000466555 POTEDQ86YR6 584 aa16.1■□□□□ 0.17
TM9SF2-203ENST00000466555 PPP6R1Q9UPN7 881 aa15.94■□□□□ 0.14
TM9SF2-203ENST00000466555 ADRA2BP18089 450 aa15.91■□□□□ 0.14
TM9SF2-203ENST00000466555 PIAS4Q8N2W9 510 aaPredicted RBP15.69■□□□□ 0.1
TM9SF2-203ENST00000466555 MSH5O43196 834 aa15.63■□□□□ 0.09
TM9SF2-203ENST00000466555 PPP4R3CPQ6ZMV5 832 aa14.54□□□□□ -0.08
TM9SF2-203ENST00000466555 SCAF1Q9H7N4 1312 aaKnown RBP14.54□□□□□ -0.08
TM9SF2-203ENST00000466555 MAPK8IP2Q13387 824 aaPredicted RBP14.51□□□□□ -0.09
TM9SF2-203ENST00000466555 DMRT2Q9Y5R5 561 aa14.32□□□□□ -0.12
TM9SF2-203ENST00000466555 CNKSR2Q8WXI2 1034 aa14.18□□□□□ -0.14
TM9SF2-203ENST00000466555 NCBP3Q53F19 620 aaKnown RBP14.08□□□□□ -0.16
TM9SF2-203ENST00000466555 KCNA4P22459 653 aa13.97□□□□□ -0.17
TM9SF2-203ENST00000466555 HOXD11P31277 338 aaPredicted RBP13.95□□□□□ -0.18
TM9SF2-203ENST00000466555 RNF216Q9NWF9 866 aaPredicted RBP13.95□□□□□ -0.18
TM9SF2-203ENST00000466555 NPM3O75607 178 aaKnown RBP13.89□□□□□ -0.19
TM9SF2-203ENST00000466555 CACNB1Q02641 598 aaPredicted RBP13.72□□□□□ -0.21
TM9SF2-203ENST00000466555 DCAF8L1A6NGE4 600 aa13.69□□□□□ -0.22
TM9SF2-203ENST00000466555 DNAJC5BQ9UF47 199 aa13.53□□□□□ -0.24
TM9SF2-203ENST00000466555 RNF39Q9H2S5 420 aa13.33□□□□□ -0.28
TM9SF2-203ENST00000466555 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.28□□□□□ -0.28
TM9SF2-203ENST00000466555 SLC4A1APQ9BWU0 796 aaKnown RBP13.26□□□□□ -0.29
TM9SF2-203ENST00000466555 SLC4A2P04920 1241 aa13.18□□□□□ -0.3
TM9SF2-203ENST00000466555 C1QBPQ07021 282 aaKnown RBP13.08□□□□□ -0.32
TM9SF2-203ENST00000466555 U3KPZ7 1027 aaPredicted RBP13.06□□□□□ -0.32
TM9SF2-203ENST00000466555 FOXD4L1Q9NU39 408 aa12.9□□□□□ -0.34
TM9SF2-203ENST00000466555 ZBTB22O15209 634 aa12.85□□□□□ -0.35
TM9SF2-203ENST00000466555 MYCNP04198 464 aaPredicted RBP12.83□□□□□ -0.36
TM9SF2-203ENST00000466555 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.8□□□□□ -0.36
TM9SF2-203ENST00000466555 HNRNPUL2Q1KMD3 747 aaKnown RBP12.8□□□□□ -0.36
TM9SF2-203ENST00000466555 SPINK5Q9NQ38 1064 aaPredicted RBP12.75□□□□□ -0.37
TM9SF2-203ENST00000466555 SAMD1Q6SPF0 538 aaPredicted RBP12.74□□□□□ -0.37
TM9SF2-203ENST00000466555 APLP2Q06481 763 aa12.71□□□□□ -0.37
TM9SF2-203ENST00000466555 CAPN15O75808 1086 aa12.69□□□□□ -0.38
TM9SF2-203ENST00000466555 CSRNP3Q8WYN3 585 aa12.63□□□□□ -0.39
TM9SF2-203ENST00000466555 EHMT2Q96KQ7 1210 aa12.63□□□□□ -0.39
TM9SF2-203ENST00000466555 TRHP20396 242 aaPredicted RBP12.6□□□□□ -0.39
TM9SF2-203ENST00000466555 ZNF219Q9P2Y4 722 aaPredicted RBP12.57□□□□□ -0.4
TM9SF2-203ENST00000466555 DSG3P32926 999 aa12.55□□□□□ -0.4
TM9SF2-203ENST00000466555 ATF5Q9Y2D1 282 aaPredicted RBP12.53□□□□□ -0.4
TM9SF2-203ENST00000466555 POTEHQ6S545 545 aa12.51□□□□□ -0.41
TM9SF2-203ENST00000466555 ATXN8OSP0DMR3 200 aa12.48□□□□□ -0.41
TM9SF2-203ENST00000466555 ABCB7O75027 752 aa12.44□□□□□ -0.42
TM9SF2-203ENST00000466555 POLA2Q14181 598 aa12.35□□□□□ -0.43
TM9SF2-203ENST00000466555 ZBTB12Q9Y330 459 aaPredicted RBP12.1□□□□□ -0.47
TM9SF2-203ENST00000466555 FBLN2P98095 1184 aa11.98□□□□□ -0.49
TM9SF2-203ENST00000466555 MKRN4PQ13434 485 aaPredicted RBP11.96□□□□□ -0.49
TM9SF2-203ENST00000466555 RBM42Q9BTD8 480 aaKnown RBP11.94□□□□□ -0.5
TM9SF2-203ENST00000466555 OSCARQ8IYS5 282 aa11.92□□□□□ -0.5
TM9SF2-203ENST00000466555 SPDYE2BA6NHP3 402 aa11.77□□□□□ -0.53
TM9SF2-203ENST00000466555 SPDYE6P0CI01 402 aa11.77□□□□□ -0.53
TM9SF2-203ENST00000466555 SPDYE2Q495Y8 402 aa11.77□□□□□ -0.53
TM9SF2-203ENST00000466555 AKT1S1Q96B36 256 aa11.77□□□□□ -0.53
TM9SF2-203ENST00000466555 ZNF692Q9BU19 519 aaPredicted RBP11.71□□□□□ -0.53
TM9SF2-203ENST00000466555 CHRDL2Q6WN34 429 aa11.69□□□□□ -0.54
TM9SF2-203ENST00000466555 REM2Q8IYK8 340 aaPredicted RBP11.66□□□□□ -0.54
TM9SF2-203ENST00000466555 SSUH2Q9Y2M2 353 aa11.66□□□□□ -0.54
TM9SF2-203ENST00000466555 SPDYE4A6NLX3 237 aa11.58□□□□□ -0.56
TM9SF2-203ENST00000466555 PABPN1Q86U42 306 aaKnown RBP eCLIP11.54□□□□□ -0.56
TM9SF2-203ENST00000466555 PITPNM1O00562 1244 aa11.52□□□□□ -0.57
TM9SF2-203ENST00000466555 SP7Q8TDD2 431 aaPredicted RBP11.5□□□□□ -0.57
TM9SF2-203ENST00000466555 SPDYE1Q8NFV5 336 aaPredicted RBP11.47□□□□□ -0.57
TM9SF2-203ENST00000466555 CLEC11AQ9Y240 323 aa11.44□□□□□ -0.58
TM9SF2-203ENST00000466555 FKBP8Q14318 412 aa11.4□□□□□ -0.58
TM9SF2-203ENST00000466555 PROM2Q8N271 834 aa11.37□□□□□ -0.59
TM9SF2-203ENST00000466555 FXR2P51116 673 aaKnown RBP eCLIP11.36□□□□□ -0.59
TM9SF2-203ENST00000466555 PIP4P2Q8N4L2 257 aa11.35□□□□□ -0.59
TM9SF2-203ENST00000466555 PRR29P0C7W0 189 aa11.31□□□□□ -0.6
TM9SF2-203ENST00000466555 STAG3Q9UJ98 1225 aa11.31□□□□□ -0.6
TM9SF2-203ENST00000466555 HAX1O00165 279 aa11.24□□□□□ -0.61
TM9SF2-203ENST00000466555 PRKAR2AP13861 404 aaKnown RBP11.23□□□□□ -0.61
TM9SF2-203ENST00000466555 CHADLQ6NUI6 762 aa11.19□□□□□ -0.62
TM9SF2-203ENST00000466555 EVX2Q03828 476 aa11.14□□□□□ -0.63
TM9SF2-203ENST00000466555 CREBZFQ9NS37 354 aa11.13□□□□□ -0.63
TM9SF2-203ENST00000466555 FARP1Q9Y4F1 1045 aaPredicted RBP11.06□□□□□ -0.64
TM9SF2-203ENST00000466555 FBXO3Q9UK99 471 aa11.05□□□□□ -0.64
TM9SF2-203ENST00000466555 MIER1Q8N108 512 aa11.01□□□□□ -0.65
TM9SF2-203ENST00000466555 MNX1P50219 401 aaPredicted RBP11□□□□□ -0.65
TM9SF2-203ENST00000466555 C19orf67A6NJJ6 358 aa10.98□□□□□ -0.65
TM9SF2-203ENST00000466555 PLCD3Q8N3E9 789 aa10.96□□□□□ -0.65
TM9SF2-203ENST00000466555 PLEKHG5O94827 1062 aa10.95□□□□□ -0.66
TM9SF2-203ENST00000466555 NPM1P06748 294 aaKnown RBP eCLIP10.93□□□□□ -0.66
TM9SF2-203ENST00000466555 VASPP50552 380 aaPredicted RBP10.9□□□□□ -0.66
TM9SF2-203ENST00000466555 CD44P16070 742 aaKnown RBP10.88□□□□□ -0.67
TM9SF2-203ENST00000466555 ZBTB47Q9UFB7 747 aaPredicted RBP10.84□□□□□ -0.67
TM9SF2-203ENST00000466555 GABBR2O75899 941 aa10.81□□□□□ -0.68
TM9SF2-203ENST00000466555 ZRANB1Q9UGI0 708 aa10.8□□□□□ -0.68
TM9SF2-203ENST00000466555 LHX8Q68G74 356 aa10.79□□□□□ -0.68
TM9SF2-203ENST00000466555 PAK3O75914 559 aaPredicted RBP10.77□□□□□ -0.69
TM9SF2-203ENST00000466555 KLHL34Q8N239 644 aa10.77□□□□□ -0.69
TM9SF2-203ENST00000466555 SLC24A1O60721 1099 aa10.76□□□□□ -0.69
TM9SF2-203ENST00000466555 NUBP1P53384 320 aa10.76□□□□□ -0.69
TM9SF2-203ENST00000466555 IFNLR1Q8IU57 520 aaPredicted RBP10.76□□□□□ -0.69
TM9SF2-203ENST00000466555 RASEFQ8IZ41 740 aa10.75□□□□□ -0.69
TM9SF2-203ENST00000466555 ZNF579Q8NAF0 562 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms