RNA–Protein interactions for RNA: ENST00000466308.1

CLSPN-204, Transcript of claspin, humanhuman

TSL 3

Gene CLSPN, Length 717 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSPN-204ENST00000466308 CHIC1Q5VXU3 224 aa23.55■■□□□ 1.36
CLSPN-204ENST00000466308 AEBP2Q6ZN18 517 aaPredicted RBP23.11■■□□□ 1.29
CLSPN-204ENST00000466308 PHF23Q9BUL5 403 aaPredicted RBP20.78■□□□□ 0.92
CLSPN-204ENST00000466308 PLPPR3Q6T4P5 718 aa19.56■□□□□ 0.72
CLSPN-204ENST00000466308 SENP3Q9H4L4 574 aaPredicted RBP19.5■□□□□ 0.71
CLSPN-204ENST00000466308 ADRA2BP18089 450 aa18.23■□□□□ 0.51
CLSPN-204ENST00000466308 KCNA4P22459 653 aa18.02■□□□□ 0.48
CLSPN-204ENST00000466308 PPP6R1Q9UPN7 881 aa18.02■□□□□ 0.48
CLSPN-204ENST00000466308 FOXD1Q16676 465 aa17.95■□□□□ 0.46
CLSPN-204ENST00000466308 EHMT2Q96KQ7 1210 aa17.93■□□□□ 0.46
CLSPN-204ENST00000466308 SLC4A1APQ9BWU0 796 aaKnown RBP17.35■□□□□ 0.37
CLSPN-204ENST00000466308 PPP4R3CPQ6ZMV5 832 aa17.34■□□□□ 0.37
CLSPN-204ENST00000466308 CSRNP3Q8WYN3 585 aa17.3■□□□□ 0.36
CLSPN-204ENST00000466308 NCBP3Q53F19 620 aaKnown RBP17.19■□□□□ 0.34
CLSPN-204ENST00000466308 PIAS4Q8N2W9 510 aaPredicted RBP17.17■□□□□ 0.34
CLSPN-204ENST00000466308 NPM3O75607 178 aaKnown RBP16.91■□□□□ 0.3
CLSPN-204ENST00000466308 CNKSR2Q8WXI2 1034 aa16.66■□□□□ 0.26
CLSPN-204ENST00000466308 ZBTB22O15209 634 aa16.59■□□□□ 0.25
CLSPN-204ENST00000466308 SCAF1Q9H7N4 1312 aaKnown RBP16.57■□□□□ 0.24
CLSPN-204ENST00000466308 DNAJC5BQ9UF47 199 aa16.36■□□□□ 0.21
CLSPN-204ENST00000466308 FOXD4L1Q9NU39 408 aa16.33■□□□□ 0.2
CLSPN-204ENST00000466308 MSH5O43196 834 aa16.21■□□□□ 0.19
CLSPN-204ENST00000466308 RNF216Q9NWF9 866 aaPredicted RBP16.1■□□□□ 0.17
CLSPN-204ENST00000466308 MAPK8IP2Q13387 824 aaPredicted RBP16.08■□□□□ 0.16
CLSPN-204ENST00000466308 SLC24A1O60721 1099 aa15.94■□□□□ 0.14
CLSPN-204ENST00000466308 AMER1Q5JTC6 1135 aaPredicted RBP15.93■□□□□ 0.14
CLSPN-204ENST00000466308 RTN4Q9NQC3 1192 aaKnown RBP15.88■□□□□ 0.13
CLSPN-204ENST00000466308 POTEDQ86YR6 584 aa15.87■□□□□ 0.13
CLSPN-204ENST00000466308 HOXD11P31277 338 aaPredicted RBP15.78■□□□□ 0.12
CLSPN-204ENST00000466308 SLC4A2P04920 1241 aa15.73■□□□□ 0.11
CLSPN-204ENST00000466308 DMRT2Q9Y5R5 561 aa15.72■□□□□ 0.11
CLSPN-204ENST00000466308 ATXN8OSP0DMR3 200 aa15.71■□□□□ 0.11
CLSPN-204ENST00000466308 MYCNP04198 464 aaPredicted RBP15.63■□□□□ 0.09
CLSPN-204ENST00000466308 FKBP8Q14318 412 aa15.57■□□□□ 0.08
CLSPN-204ENST00000466308 ATF5Q9Y2D1 282 aaPredicted RBP15.09■□□□□ 0.01
CLSPN-204ENST00000466308 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.07■□□□□ 0
CLSPN-204ENST00000466308 HNRNPUL2Q1KMD3 747 aaKnown RBP15.07■□□□□ 0
CLSPN-204ENST00000466308 SAMD1Q6SPF0 538 aaPredicted RBP15.06■□□□□ 0
CLSPN-204ENST00000466308 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.02■□□□□ -0
CLSPN-204ENST00000466308 DCAF8L1A6NGE4 600 aa14.94□□□□□ -0.02
CLSPN-204ENST00000466308 U3KPZ7 1027 aaPredicted RBP14.88□□□□□ -0.03
CLSPN-204ENST00000466308 FBXO3Q9UK99 471 aa14.8□□□□□ -0.04
CLSPN-204ENST00000466308 ZNF219Q9P2Y4 722 aaPredicted RBP14.77□□□□□ -0.05
CLSPN-204ENST00000466308 APLP2Q06481 763 aa14.69□□□□□ -0.06
CLSPN-204ENST00000466308 SPDYE4A6NLX3 237 aa14.65□□□□□ -0.06
CLSPN-204ENST00000466308 PLCB2Q00722 1185 aa14.64□□□□□ -0.07
CLSPN-204ENST00000466308 PROM2Q8N271 834 aa14.59□□□□□ -0.07
CLSPN-204ENST00000466308 VASPP50552 380 aaPredicted RBP14.55□□□□□ -0.08
CLSPN-204ENST00000466308 MKRN4PQ13434 485 aaPredicted RBP14.51□□□□□ -0.09
CLSPN-204ENST00000466308 FBLN2P98095 1184 aa14.44□□□□□ -0.1
CLSPN-204ENST00000466308 HAP1P54257 671 aaPredicted RBP14.41□□□□□ -0.1
CLSPN-204ENST00000466308 IFNLR1Q8IU57 520 aaPredicted RBP14.41□□□□□ -0.1
CLSPN-204ENST00000466308 DCAF8L2P0C7V8 631 aa14.38□□□□□ -0.11
CLSPN-204ENST00000466308 PKD2Q13563 968 aa14.31□□□□□ -0.12
CLSPN-204ENST00000466308 BCANQ96GW7 911 aa14.31□□□□□ -0.12
CLSPN-204ENST00000466308 VSIG10Q8N0Z9 540 aa14.26□□□□□ -0.13
CLSPN-204ENST00000466308 TRHP20396 242 aaPredicted RBP14.23□□□□□ -0.13
CLSPN-204ENST00000466308 POLA2Q14181 598 aa14.23□□□□□ -0.13
CLSPN-204ENST00000466308 SPINK5Q9NQ38 1064 aaPredicted RBP14.16□□□□□ -0.14
CLSPN-204ENST00000466308 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.12□□□□□ -0.15
CLSPN-204ENST00000466308 ZBTB12Q9Y330 459 aaPredicted RBP14.12□□□□□ -0.15
CLSPN-204ENST00000466308 BBXQ8WY36 941 aaPredicted RBP14.11□□□□□ -0.15
CLSPN-204ENST00000466308 SPOCK2Q92563 424 aa14.1□□□□□ -0.15
CLSPN-204ENST00000466308 TAOK2Q9UL54 1235 aa14.1□□□□□ -0.15
CLSPN-204ENST00000466308 CAPN15O75808 1086 aa14.07□□□□□ -0.16
CLSPN-204ENST00000466308 KLHL34Q8N239 644 aa14.06□□□□□ -0.16
CLSPN-204ENST00000466308 PRKCSHP14314 528 aaPredicted RBP14.05□□□□□ -0.16
CLSPN-204ENST00000466308 ECM2O94769 699 aaPredicted RBP14.04□□□□□ -0.16
CLSPN-204ENST00000466308 STAG3Q9UJ98 1225 aa13.99□□□□□ -0.17
CLSPN-204ENST00000466308 KDM2AQ9Y2K7 1162 aa13.98□□□□□ -0.17
CLSPN-204ENST00000466308 PAXIP1Q6ZW49 1069 aaPredicted RBP13.97□□□□□ -0.17
CLSPN-204ENST00000466308 RNF39Q9H2S5 420 aa13.97□□□□□ -0.17
CLSPN-204ENST00000466308 NPM1P06748 294 aaKnown RBP eCLIP13.96□□□□□ -0.17
CLSPN-204ENST00000466308 CFAP44Q96MT7 982 aa13.92□□□□□ -0.18
CLSPN-204ENST00000466308 C1QBPQ07021 282 aaKnown RBP13.88□□□□□ -0.19
CLSPN-204ENST00000466308 PLCD3Q8N3E9 789 aa13.88□□□□□ -0.19
CLSPN-204ENST00000466308 ABCB7O75027 752 aa13.87□□□□□ -0.19
CLSPN-204ENST00000466308 ZNF692Q9BU19 519 aaPredicted RBP13.87□□□□□ -0.19
CLSPN-204ENST00000466308 RGL2O15211 777 aa13.86□□□□□ -0.19
CLSPN-204ENST00000466308 TPRNQ4KMQ1 711 aa13.86□□□□□ -0.19
CLSPN-204ENST00000466308 SPRYD3Q8NCJ5 442 aa13.86□□□□□ -0.19
CLSPN-204ENST00000466308 SPDYE2BA6NHP3 402 aa13.8□□□□□ -0.2
CLSPN-204ENST00000466308 SPDYE6P0CI01 402 aa13.8□□□□□ -0.2
CLSPN-204ENST00000466308 SPDYE2Q495Y8 402 aa13.8□□□□□ -0.2
CLSPN-204ENST00000466308 SSUH2Q9Y2M2 353 aa13.8□□□□□ -0.2
CLSPN-204ENST00000466308 MIER1Q8N108 512 aa13.79□□□□□ -0.2
CLSPN-204ENST00000466308 TSHZ2Q9NRE2 1034 aa13.77□□□□□ -0.21
CLSPN-204ENST00000466308 CHGAP10645 457 aaKnown RBP13.71□□□□□ -0.21
CLSPN-204ENST00000466308 PABPN1Q86U42 306 aaKnown RBP eCLIP13.71□□□□□ -0.21
CLSPN-204ENST00000466308 OSCARQ8IYS5 282 aa13.71□□□□□ -0.21
CLSPN-204ENST00000466308 ZBTB47Q9UFB7 747 aaPredicted RBP13.71□□□□□ -0.21
CLSPN-204ENST00000466308 PLEKHG5O94827 1062 aa13.68□□□□□ -0.22
CLSPN-204ENST00000466308 CIZ1Q9ULV3 898 aaPredicted RBP13.68□□□□□ -0.22
CLSPN-204ENST00000466308 TRIM41Q8WV44 630 aa13.67□□□□□ -0.22
CLSPN-204ENST00000466308 DNAJC5Q9H3Z4 198 aa13.64□□□□□ -0.23
CLSPN-204ENST00000466308 DSG3P32926 999 aa13.62□□□□□ -0.23
CLSPN-204ENST00000466308 HS6ST3Q8IZP7 471 aa13.6□□□□□ -0.23
CLSPN-204ENST00000466308 NBR1Q14596 966 aa13.58□□□□□ -0.24
CLSPN-204ENST00000466308 GSE1Q14687 1217 aa13.48□□□□□ -0.25
CLSPN-204ENST00000466308 RNF25Q96BH1 459 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms