RNA–Protein interactions for RNA: ENST00000466105.5

CCSER2-204, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 3

Gene CCSER2, Length 713 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-204ENST00000466105 AEBP2Q6ZN18 517 aaPredicted RBP34.72■■■■□ 3.15
CCSER2-204ENST00000466105 CHIC1Q5VXU3 224 aa32.6■■■□□ 2.81
CCSER2-204ENST00000466105 SENP3Q9H4L4 574 aaPredicted RBP29.61■■■□□ 2.33
CCSER2-204ENST00000466105 PHF23Q9BUL5 403 aaPredicted RBP29.18■■■□□ 2.26
CCSER2-204ENST00000466105 FOXD1Q16676 465 aa27.67■■■□□ 2.02
CCSER2-204ENST00000466105 POTEDQ86YR6 584 aa25.99■■□□□ 1.75
CCSER2-204ENST00000466105 MSH5O43196 834 aa25.98■■□□□ 1.75
CCSER2-204ENST00000466105 PLPPR3Q6T4P5 718 aa25.86■■□□□ 1.73
CCSER2-204ENST00000466105 PIAS4Q8N2W9 510 aaPredicted RBP25.73■■□□□ 1.71
CCSER2-204ENST00000466105 PPP6R1Q9UPN7 881 aa25.63■■□□□ 1.69
CCSER2-204ENST00000466105 ADRA2BP18089 450 aa25.49■■□□□ 1.67
CCSER2-204ENST00000466105 MAPK8IP2Q13387 824 aaPredicted RBP23.53■■□□□ 1.36
CCSER2-204ENST00000466105 DMRT2Q9Y5R5 561 aa23.45■■□□□ 1.34
CCSER2-204ENST00000466105 SCAF1Q9H7N4 1312 aaKnown RBP23.26■■□□□ 1.31
CCSER2-204ENST00000466105 PPP4R3CPQ6ZMV5 832 aa22.62■■□□□ 1.21
CCSER2-204ENST00000466105 CACNB1Q02641 598 aaPredicted RBP22.48■■□□□ 1.19
CCSER2-204ENST00000466105 HOXD11P31277 338 aaPredicted RBP22.47■■□□□ 1.19
CCSER2-204ENST00000466105 DCAF8L1A6NGE4 600 aa22.4■■□□□ 1.18
CCSER2-204ENST00000466105 CNKSR2Q8WXI2 1034 aa22.28■■□□□ 1.16
CCSER2-204ENST00000466105 RNF39Q9H2S5 420 aa22.19■■□□□ 1.14
CCSER2-204ENST00000466105 RNF216Q9NWF9 866 aaPredicted RBP22.18■■□□□ 1.14
CCSER2-204ENST00000466105 C1QBPQ07021 282 aaKnown RBP21.81■■□□□ 1.08
CCSER2-204ENST00000466105 DNAJC5BQ9UF47 199 aa21.78■■□□□ 1.08
CCSER2-204ENST00000466105 NCBP3Q53F19 620 aaKnown RBP21.6■■□□□ 1.05
CCSER2-204ENST00000466105 NPM3O75607 178 aaKnown RBP21.36■■□□□ 1.01
CCSER2-204ENST00000466105 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.32■■□□□ 1
CCSER2-204ENST00000466105 U3KPZ7 1027 aaPredicted RBP20.9■□□□□ 0.94
CCSER2-204ENST00000466105 SPINK5Q9NQ38 1064 aaPredicted RBP20.7■□□□□ 0.9
CCSER2-204ENST00000466105 DSG3P32926 999 aa20.65■□□□□ 0.9
CCSER2-204ENST00000466105 KCNA4P22459 653 aa20.64■□□□□ 0.89
CCSER2-204ENST00000466105 CAPN15O75808 1086 aa20.62■□□□□ 0.89
CCSER2-204ENST00000466105 SLC4A2P04920 1241 aa20.52■□□□□ 0.88
CCSER2-204ENST00000466105 POTEHQ6S545 545 aa20.28■□□□□ 0.84
CCSER2-204ENST00000466105 TRHP20396 242 aaPredicted RBP20.2■□□□□ 0.82
CCSER2-204ENST00000466105 APLP2Q06481 763 aa20.19■□□□□ 0.82
CCSER2-204ENST00000466105 ZNF219Q9P2Y4 722 aaPredicted RBP20.17■□□□□ 0.82
CCSER2-204ENST00000466105 ABCB7O75027 752 aa20.13■□□□□ 0.81
CCSER2-204ENST00000466105 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.12■□□□□ 0.81
CCSER2-204ENST00000466105 HNRNPUL2Q1KMD3 747 aaKnown RBP20.12■□□□□ 0.81
CCSER2-204ENST00000466105 SAMD1Q6SPF0 538 aaPredicted RBP20.01■□□□□ 0.79
CCSER2-204ENST00000466105 MYCNP04198 464 aaPredicted RBP19.73■□□□□ 0.75
CCSER2-204ENST00000466105 RBM42Q9BTD8 480 aaKnown RBP19.65■□□□□ 0.74
CCSER2-204ENST00000466105 POLA2Q14181 598 aa19.61■□□□□ 0.73
CCSER2-204ENST00000466105 CHRDL2Q6WN34 429 aa19.4■□□□□ 0.7
CCSER2-204ENST00000466105 SLC4A1APQ9BWU0 796 aaKnown RBP19.37■□□□□ 0.69
CCSER2-204ENST00000466105 ATF5Q9Y2D1 282 aaPredicted RBP19.36■□□□□ 0.69
CCSER2-204ENST00000466105 FOXD4L1Q9NU39 408 aa19.34■□□□□ 0.69
CCSER2-204ENST00000466105 ZBTB12Q9Y330 459 aaPredicted RBP19.17■□□□□ 0.66
CCSER2-204ENST00000466105 AKT1S1Q96B36 256 aa19.15■□□□□ 0.66
CCSER2-204ENST00000466105 ZBTB22O15209 634 aa19.02■□□□□ 0.64
CCSER2-204ENST00000466105 OSCARQ8IYS5 282 aa19.02■□□□□ 0.64
CCSER2-204ENST00000466105 REM2Q8IYK8 340 aaPredicted RBP18.99■□□□□ 0.63
CCSER2-204ENST00000466105 PIP4P2Q8N4L2 257 aa18.88■□□□□ 0.61
CCSER2-204ENST00000466105 SP7Q8TDD2 431 aaPredicted RBP18.85■□□□□ 0.61
CCSER2-204ENST00000466105 PITPNM1O00562 1244 aa18.8■□□□□ 0.6
CCSER2-204ENST00000466105 ATXN8OSP0DMR3 200 aa18.79■□□□□ 0.6
CCSER2-204ENST00000466105 FXR2P51116 673 aaKnown RBP eCLIP18.72■□□□□ 0.59
CCSER2-204ENST00000466105 SPDYE2BA6NHP3 402 aa18.57■□□□□ 0.56
CCSER2-204ENST00000466105 HAX1O00165 279 aa18.57■□□□□ 0.56
CCSER2-204ENST00000466105 SPDYE6P0CI01 402 aa18.57■□□□□ 0.56
CCSER2-204ENST00000466105 SPDYE2Q495Y8 402 aa18.57■□□□□ 0.56
CCSER2-204ENST00000466105 FBLN2P98095 1184 aa18.53■□□□□ 0.56
CCSER2-204ENST00000466105 MKRN4PQ13434 485 aaPredicted RBP18.46■□□□□ 0.55
CCSER2-204ENST00000466105 EVX2Q03828 476 aa18.4■□□□□ 0.54
CCSER2-204ENST00000466105 SSUH2Q9Y2M2 353 aa18.33■□□□□ 0.52
CCSER2-204ENST00000466105 SPDYE1Q8NFV5 336 aaPredicted RBP18.31■□□□□ 0.52
CCSER2-204ENST00000466105 PRKAR2AP13861 404 aaKnown RBP18.28■□□□□ 0.52
CCSER2-204ENST00000466105 ZNF692Q9BU19 519 aaPredicted RBP18.27■□□□□ 0.52
CCSER2-204ENST00000466105 CLEC11AQ9Y240 323 aa18.27■□□□□ 0.52
CCSER2-204ENST00000466105 C19orf67A6NJJ6 358 aa18.13■□□□□ 0.49
CCSER2-204ENST00000466105 CHADLQ6NUI6 762 aa18.01■□□□□ 0.47
CCSER2-204ENST00000466105 PABPN1Q86U42 306 aaKnown RBP eCLIP18■□□□□ 0.47
CCSER2-204ENST00000466105 GABBR2O75899 941 aa17.93■□□□□ 0.46
CCSER2-204ENST00000466105 PRR29P0C7W0 189 aa17.93■□□□□ 0.46
CCSER2-204ENST00000466105 CSRNP3Q8WYN3 585 aa17.83■□□□□ 0.44
CCSER2-204ENST00000466105 FARP1Q9Y4F1 1045 aaPredicted RBP17.71■□□□□ 0.43
CCSER2-204ENST00000466105 CD44P16070 742 aaKnown RBP17.67■□□□□ 0.42
CCSER2-204ENST00000466105 LHX8Q68G74 356 aa17.66■□□□□ 0.42
CCSER2-204ENST00000466105 POTEIP0CG38 1075 aa17.59■□□□□ 0.41
CCSER2-204ENST00000466105 EHMT2Q96KQ7 1210 aa17.57■□□□□ 0.4
CCSER2-204ENST00000466105 CLCN6P51797 869 aa17.5■□□□□ 0.39
CCSER2-204ENST00000466105 CREBZFQ9NS37 354 aa17.47■□□□□ 0.39
CCSER2-204ENST00000466105 ZNF579Q8NAF0 562 aaKnown RBP17.42■□□□□ 0.38
CCSER2-204ENST00000466105 STAG3Q9UJ98 1225 aa17.41■□□□□ 0.38
CCSER2-204ENST00000466105 ZRANB1Q9UGI0 708 aa17.36■□□□□ 0.37
CCSER2-204ENST00000466105 SPDYE4A6NLX3 237 aa17.34■□□□□ 0.37
CCSER2-204ENST00000466105 DCBLD2Q96PD2 775 aa17.31■□□□□ 0.36
CCSER2-204ENST00000466105 GALR2O43603 387 aaPredicted RBP17.23■□□□□ 0.35
CCSER2-204ENST00000466105 MNX1P50219 401 aaPredicted RBP17.17■□□□□ 0.34
CCSER2-204ENST00000466105 PHF12Q96QT6 1004 aa17.12■□□□□ 0.33
CCSER2-204ENST00000466105 PAK3O75914 559 aaPredicted RBP17.1■□□□□ 0.33
CCSER2-204ENST00000466105 NPM1P06748 294 aaKnown RBP eCLIP17.07■□□□□ 0.32
CCSER2-204ENST00000466105 POTEB2H3BUK9 544 aa17.01■□□□□ 0.31
CCSER2-204ENST00000466105 OTUD5Q96G74 571 aa17■□□□□ 0.31
CCSER2-204ENST00000466105 PROM2Q8N271 834 aa16.97■□□□□ 0.31
CCSER2-204ENST00000466105 PELP1Q8IZL8 1130 aaKnown RBP16.95■□□□□ 0.3
CCSER2-204ENST00000466105 MS4A3Q96HJ5 214 aa16.88■□□□□ 0.29
CCSER2-204ENST00000466105 ASTLQ6HA08 431 aaPredicted RBP16.87■□□□□ 0.29
CCSER2-204ENST00000466105 ATMINO43313 823 aaPredicted RBP16.81■□□□□ 0.28
CCSER2-204ENST00000466105 METRNQ9UJH8 293 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms