RNA–Protein interactions for RNA: ENST00000466103.1

CNOT10-210, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 3

Gene CNOT10, Length 303 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-210ENST00000466103 AEBP2Q6ZN18 517 aaPredicted RBP29.09■■■□□ 2.25
CNOT10-210ENST00000466103 CHIC1Q5VXU3 224 aa27.81■■■□□ 2.04
CNOT10-210ENST00000466103 PHF23Q9BUL5 403 aaPredicted RBP24.55■■□□□ 1.52
CNOT10-210ENST00000466103 SENP3Q9H4L4 574 aaPredicted RBP24.49■■□□□ 1.51
CNOT10-210ENST00000466103 FOXD1Q16676 465 aa22.98■■□□□ 1.27
CNOT10-210ENST00000466103 PLPPR3Q6T4P5 718 aa22.28■■□□□ 1.16
CNOT10-210ENST00000466103 PPP6R1Q9UPN7 881 aa21.85■■□□□ 1.09
CNOT10-210ENST00000466103 ADRA2BP18089 450 aa21.77■■□□□ 1.08
CNOT10-210ENST00000466103 PIAS4Q8N2W9 510 aaPredicted RBP21.46■■□□□ 1.03
CNOT10-210ENST00000466103 MSH5O43196 834 aa21.13■□□□□ 0.97
CNOT10-210ENST00000466103 POTEDQ86YR6 584 aa20.23■□□□□ 0.83
CNOT10-210ENST00000466103 MAPK8IP2Q13387 824 aaPredicted RBP19.94■□□□□ 0.78
CNOT10-210ENST00000466103 PPP4R3CPQ6ZMV5 832 aa19.68■□□□□ 0.74
CNOT10-210ENST00000466103 SCAF1Q9H7N4 1312 aaKnown RBP19.6■□□□□ 0.73
CNOT10-210ENST00000466103 DMRT2Q9Y5R5 561 aa19.54■□□□□ 0.72
CNOT10-210ENST00000466103 CNKSR2Q8WXI2 1034 aa19.14■□□□□ 0.65
CNOT10-210ENST00000466103 HOXD11P31277 338 aaPredicted RBP18.96■□□□□ 0.63
CNOT10-210ENST00000466103 RNF216Q9NWF9 866 aaPredicted RBP18.87■□□□□ 0.61
CNOT10-210ENST00000466103 NCBP3Q53F19 620 aaKnown RBP18.85■□□□□ 0.61
CNOT10-210ENST00000466103 KCNA4P22459 653 aa18.81■□□□□ 0.6
CNOT10-210ENST00000466103 NPM3O75607 178 aaKnown RBP18.79■□□□□ 0.6
CNOT10-210ENST00000466103 DCAF8L1A6NGE4 600 aa18.75■□□□□ 0.59
CNOT10-210ENST00000466103 RNF39Q9H2S5 420 aa18.19■□□□□ 0.5
CNOT10-210ENST00000466103 DNAJC5BQ9UF47 199 aa18.13■□□□□ 0.49
CNOT10-210ENST00000466103 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.04■□□□□ 0.48
CNOT10-210ENST00000466103 CACNB1Q02641 598 aaPredicted RBP18.02■□□□□ 0.48
CNOT10-210ENST00000466103 SLC4A2P04920 1241 aa17.91■□□□□ 0.46
CNOT10-210ENST00000466103 C1QBPQ07021 282 aaKnown RBP17.83■□□□□ 0.44
CNOT10-210ENST00000466103 U3KPZ7 1027 aaPredicted RBP17.81■□□□□ 0.44
CNOT10-210ENST00000466103 SLC4A1APQ9BWU0 796 aaKnown RBP17.71■□□□□ 0.43
CNOT10-210ENST00000466103 SPINK5Q9NQ38 1064 aaPredicted RBP17.5■□□□□ 0.39
CNOT10-210ENST00000466103 ZBTB22O15209 634 aa17.38■□□□□ 0.37
CNOT10-210ENST00000466103 CAPN15O75808 1086 aa17.33■□□□□ 0.36
CNOT10-210ENST00000466103 FOXD4L1Q9NU39 408 aa17.29■□□□□ 0.36
CNOT10-210ENST00000466103 MYCNP04198 464 aaPredicted RBP17.24■□□□□ 0.35
CNOT10-210ENST00000466103 DSG3P32926 999 aa17.19■□□□□ 0.34
CNOT10-210ENST00000466103 TRHP20396 242 aaPredicted RBP17.18■□□□□ 0.34
CNOT10-210ENST00000466103 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.14■□□□□ 0.33
CNOT10-210ENST00000466103 HNRNPUL2Q1KMD3 747 aaKnown RBP17.14■□□□□ 0.33
CNOT10-210ENST00000466103 SAMD1Q6SPF0 538 aaPredicted RBP17.13■□□□□ 0.33
CNOT10-210ENST00000466103 ATF5Q9Y2D1 282 aaPredicted RBP17.08■□□□□ 0.32
CNOT10-210ENST00000466103 ABCB7O75027 752 aa17.07■□□□□ 0.32
CNOT10-210ENST00000466103 APLP2Q06481 763 aa17■□□□□ 0.31
CNOT10-210ENST00000466103 ZNF219Q9P2Y4 722 aaPredicted RBP17■□□□□ 0.31
CNOT10-210ENST00000466103 CSRNP3Q8WYN3 585 aa16.84■□□□□ 0.29
CNOT10-210ENST00000466103 EHMT2Q96KQ7 1210 aa16.8■□□□□ 0.28
CNOT10-210ENST00000466103 POLA2Q14181 598 aa16.79■□□□□ 0.28
CNOT10-210ENST00000466103 ATXN8OSP0DMR3 200 aa16.63■□□□□ 0.25
CNOT10-210ENST00000466103 OSCARQ8IYS5 282 aa16.27■□□□□ 0.2
CNOT10-210ENST00000466103 MKRN4PQ13434 485 aaPredicted RBP16.26■□□□□ 0.19
CNOT10-210ENST00000466103 ZBTB12Q9Y330 459 aaPredicted RBP16.24■□□□□ 0.19
CNOT10-210ENST00000466103 RBM42Q9BTD8 480 aaKnown RBP16.18■□□□□ 0.18
CNOT10-210ENST00000466103 FBLN2P98095 1184 aa16.08■□□□□ 0.16
CNOT10-210ENST00000466103 AKT1S1Q96B36 256 aa15.97■□□□□ 0.15
CNOT10-210ENST00000466103 REM2Q8IYK8 340 aaPredicted RBP15.92■□□□□ 0.14
CNOT10-210ENST00000466103 SPDYE2BA6NHP3 402 aa15.88■□□□□ 0.13
CNOT10-210ENST00000466103 SPDYE6P0CI01 402 aa15.88■□□□□ 0.13
CNOT10-210ENST00000466103 SPDYE2Q495Y8 402 aa15.88■□□□□ 0.13
CNOT10-210ENST00000466103 POTEHQ6S545 545 aa15.87■□□□□ 0.13
CNOT10-210ENST00000466103 CHRDL2Q6WN34 429 aa15.84■□□□□ 0.13
CNOT10-210ENST00000466103 ZNF692Q9BU19 519 aaPredicted RBP15.81■□□□□ 0.12
CNOT10-210ENST00000466103 SSUH2Q9Y2M2 353 aa15.79■□□□□ 0.12
CNOT10-210ENST00000466103 PITPNM1O00562 1244 aa15.77■□□□□ 0.12
CNOT10-210ENST00000466103 PABPN1Q86U42 306 aaKnown RBP eCLIP15.63■□□□□ 0.09
CNOT10-210ENST00000466103 PIP4P2Q8N4L2 257 aa15.59■□□□□ 0.09
CNOT10-210ENST00000466103 CLEC11AQ9Y240 323 aa15.58■□□□□ 0.08
CNOT10-210ENST00000466103 SPDYE4A6NLX3 237 aa15.54■□□□□ 0.08
CNOT10-210ENST00000466103 FXR2P51116 673 aaKnown RBP eCLIP15.52■□□□□ 0.08
CNOT10-210ENST00000466103 SPDYE1Q8NFV5 336 aaPredicted RBP15.51■□□□□ 0.07
CNOT10-210ENST00000466103 CHADLQ6NUI6 762 aa15.35■□□□□ 0.05
CNOT10-210ENST00000466103 PRKAR2AP13861 404 aaKnown RBP15.33■□□□□ 0.04
CNOT10-210ENST00000466103 PRR29P0C7W0 189 aa15.3■□□□□ 0.04
CNOT10-210ENST00000466103 PROM2Q8N271 834 aa15.23■□□□□ 0.03
CNOT10-210ENST00000466103 EVX2Q03828 476 aa15.21■□□□□ 0.03
CNOT10-210ENST00000466103 FKBP8Q14318 412 aa15.19■□□□□ 0.02
CNOT10-210ENST00000466103 HAX1O00165 279 aa15.17■□□□□ 0.02
CNOT10-210ENST00000466103 CREBZFQ9NS37 354 aa15.11■□□□□ 0.01
CNOT10-210ENST00000466103 STAG3Q9UJ98 1225 aa15.09■□□□□ 0.01
CNOT10-210ENST00000466103 FARP1Q9Y4F1 1045 aaPredicted RBP15.03■□□□□ -0
CNOT10-210ENST00000466103 SP7Q8TDD2 431 aaPredicted RBP15.02■□□□□ -0
CNOT10-210ENST00000466103 C19orf67A6NJJ6 358 aa15.01□□□□□ -0.01
CNOT10-210ENST00000466103 MNX1P50219 401 aaPredicted RBP14.93□□□□□ -0.02
CNOT10-210ENST00000466103 CD44P16070 742 aaKnown RBP14.85□□□□□ -0.03
CNOT10-210ENST00000466103 MIER1Q8N108 512 aa14.77□□□□□ -0.05
CNOT10-210ENST00000466103 GABBR2O75899 941 aa14.74□□□□□ -0.05
CNOT10-210ENST00000466103 ZRANB1Q9UGI0 708 aa14.71□□□□□ -0.05
CNOT10-210ENST00000466103 PLCD3Q8N3E9 789 aa14.67□□□□□ -0.06
CNOT10-210ENST00000466103 NPM1P06748 294 aaKnown RBP eCLIP14.65□□□□□ -0.06
CNOT10-210ENST00000466103 PHF12Q96QT6 1004 aa14.62□□□□□ -0.07
CNOT10-210ENST00000466103 ZNF579Q8NAF0 562 aaKnown RBP14.6□□□□□ -0.07
CNOT10-210ENST00000466103 RASEFQ8IZ41 740 aa14.58□□□□□ -0.08
CNOT10-210ENST00000466103 TSPYL2Q9H2G4 693 aaPredicted RBP14.58□□□□□ -0.08
CNOT10-210ENST00000466103 FBXO3Q9UK99 471 aa14.56□□□□□ -0.08
CNOT10-210ENST00000466103 GALR2O43603 387 aaPredicted RBP14.53□□□□□ -0.08
CNOT10-210ENST00000466103 POTEIP0CG38 1075 aa14.53□□□□□ -0.08
CNOT10-210ENST00000466103 VASPP50552 380 aaPredicted RBP14.53□□□□□ -0.08
CNOT10-210ENST00000466103 PLEKHG5O94827 1062 aa14.52□□□□□ -0.09
CNOT10-210ENST00000466103 NUBP1P53384 320 aa14.51□□□□□ -0.09
CNOT10-210ENST00000466103 PAK3O75914 559 aaPredicted RBP14.5□□□□□ -0.09
CNOT10-210ENST00000466103 CCDC61Q9Y6R9 512 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms