RNA–Protein interactions for RNA: ENST00000466065.1

ARID4A-209, Transcript of AT-rich interaction domain 4A, humanhuman

TSL 3

Gene ARID4A, Length 370 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID4A-209ENST00000466065 AEBP2Q6ZN18 517 aaPredicted RBP30.65■■■□□ 2.5
ARID4A-209ENST00000466065 CHIC1Q5VXU3 224 aa29.97■■■□□ 2.39
ARID4A-209ENST00000466065 PHF23Q9BUL5 403 aaPredicted RBP26.4■■□□□ 1.82
ARID4A-209ENST00000466065 SENP3Q9H4L4 574 aaPredicted RBP25.93■■□□□ 1.74
ARID4A-209ENST00000466065 PLPPR3Q6T4P5 718 aa24.34■■□□□ 1.49
ARID4A-209ENST00000466065 FOXD1Q16676 465 aa24.1■■□□□ 1.45
ARID4A-209ENST00000466065 PPP6R1Q9UPN7 881 aa23.28■■□□□ 1.32
ARID4A-209ENST00000466065 ADRA2BP18089 450 aa23.23■■□□□ 1.31
ARID4A-209ENST00000466065 PIAS4Q8N2W9 510 aaPredicted RBP22.69■■□□□ 1.22
ARID4A-209ENST00000466065 MSH5O43196 834 aa22.15■■□□□ 1.14
ARID4A-209ENST00000466065 PPP4R3CPQ6ZMV5 832 aa21.48■■□□□ 1.03
ARID4A-209ENST00000466065 SCAF1Q9H7N4 1312 aaKnown RBP21.2■□□□□ 0.98
ARID4A-209ENST00000466065 MAPK8IP2Q13387 824 aaPredicted RBP21.07■□□□□ 0.96
ARID4A-209ENST00000466065 KCNA4P22459 653 aa21.06■□□□□ 0.96
ARID4A-209ENST00000466065 NCBP3Q53F19 620 aaKnown RBP20.89■□□□□ 0.93
ARID4A-209ENST00000466065 CNKSR2Q8WXI2 1034 aa20.84■□□□□ 0.93
ARID4A-209ENST00000466065 DMRT2Q9Y5R5 561 aa20.73■□□□□ 0.91
ARID4A-209ENST00000466065 NPM3O75607 178 aaKnown RBP20.63■□□□□ 0.89
ARID4A-209ENST00000466065 RNF216Q9NWF9 866 aaPredicted RBP20.43■□□□□ 0.86
ARID4A-209ENST00000466065 HOXD11P31277 338 aaPredicted RBP20.35■□□□□ 0.85
ARID4A-209ENST00000466065 POTEDQ86YR6 584 aa20.08■□□□□ 0.81
ARID4A-209ENST00000466065 DNAJC5BQ9UF47 199 aa20.06■□□□□ 0.8
ARID4A-209ENST00000466065 SLC4A1APQ9BWU0 796 aaKnown RBP20.04■□□□□ 0.8
ARID4A-209ENST00000466065 DCAF8L1A6NGE4 600 aa19.77■□□□□ 0.76
ARID4A-209ENST00000466065 EHMT2Q96KQ7 1210 aa19.53■□□□□ 0.72
ARID4A-209ENST00000466065 SLC4A2P04920 1241 aa19.49■□□□□ 0.71
ARID4A-209ENST00000466065 ZBTB22O15209 634 aa19.41■□□□□ 0.7
ARID4A-209ENST00000466065 CSRNP3Q8WYN3 585 aa19.35■□□□□ 0.69
ARID4A-209ENST00000466065 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.34■□□□□ 0.69
ARID4A-209ENST00000466065 FOXD4L1Q9NU39 408 aa19.34■□□□□ 0.69
ARID4A-209ENST00000466065 U3KPZ7 1027 aaPredicted RBP19.07■□□□□ 0.64
ARID4A-209ENST00000466065 MYCNP04198 464 aaPredicted RBP19.03■□□□□ 0.64
ARID4A-209ENST00000466065 RNF39Q9H2S5 420 aa19.02■□□□□ 0.64
ARID4A-209ENST00000466065 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.8■□□□□ 0.6
ARID4A-209ENST00000466065 HNRNPUL2Q1KMD3 747 aaKnown RBP18.8■□□□□ 0.6
ARID4A-209ENST00000466065 C1QBPQ07021 282 aaKnown RBP18.78■□□□□ 0.6
ARID4A-209ENST00000466065 SAMD1Q6SPF0 538 aaPredicted RBP18.75■□□□□ 0.59
ARID4A-209ENST00000466065 ATXN8OSP0DMR3 200 aa18.67■□□□□ 0.58
ARID4A-209ENST00000466065 APLP2Q06481 763 aa18.57■□□□□ 0.56
ARID4A-209ENST00000466065 ATF5Q9Y2D1 282 aaPredicted RBP18.57■□□□□ 0.56
ARID4A-209ENST00000466065 SPINK5Q9NQ38 1064 aaPredicted RBP18.53■□□□□ 0.56
ARID4A-209ENST00000466065 CACNB1Q02641 598 aaPredicted RBP18.44■□□□□ 0.54
ARID4A-209ENST00000466065 CAPN15O75808 1086 aa18.4■□□□□ 0.54
ARID4A-209ENST00000466065 TRHP20396 242 aaPredicted RBP18.34■□□□□ 0.53
ARID4A-209ENST00000466065 ZNF219Q9P2Y4 722 aaPredicted RBP18.33■□□□□ 0.52
ARID4A-209ENST00000466065 DSG3P32926 999 aa18.13■□□□□ 0.49
ARID4A-209ENST00000466065 POLA2Q14181 598 aa18.08■□□□□ 0.48
ARID4A-209ENST00000466065 ABCB7O75027 752 aa18.07■□□□□ 0.48
ARID4A-209ENST00000466065 MKRN4PQ13434 485 aaPredicted RBP17.77■□□□□ 0.44
ARID4A-209ENST00000466065 ZBTB12Q9Y330 459 aaPredicted RBP17.74■□□□□ 0.43
ARID4A-209ENST00000466065 FBLN2P98095 1184 aa17.71■□□□□ 0.43
ARID4A-209ENST00000466065 OSCARQ8IYS5 282 aa17.45■□□□□ 0.38
ARID4A-209ENST00000466065 FKBP8Q14318 412 aa17.43■□□□□ 0.38
ARID4A-209ENST00000466065 SPDYE4A6NLX3 237 aa17.35■□□□□ 0.37
ARID4A-209ENST00000466065 SPDYE2BA6NHP3 402 aa17.31■□□□□ 0.36
ARID4A-209ENST00000466065 SPDYE6P0CI01 402 aa17.31■□□□□ 0.36
ARID4A-209ENST00000466065 SPDYE2Q495Y8 402 aa17.31■□□□□ 0.36
ARID4A-209ENST00000466065 ZNF692Q9BU19 519 aaPredicted RBP17.24■□□□□ 0.35
ARID4A-209ENST00000466065 RBM42Q9BTD8 480 aaKnown RBP17.22■□□□□ 0.35
ARID4A-209ENST00000466065 SSUH2Q9Y2M2 353 aa17.21■□□□□ 0.35
ARID4A-209ENST00000466065 PROM2Q8N271 834 aa17.13■□□□□ 0.33
ARID4A-209ENST00000466065 AKT1S1Q96B36 256 aa17.05■□□□□ 0.32
ARID4A-209ENST00000466065 PABPN1Q86U42 306 aaKnown RBP eCLIP17.02■□□□□ 0.32
ARID4A-209ENST00000466065 REM2Q8IYK8 340 aaPredicted RBP16.9■□□□□ 0.3
ARID4A-209ENST00000466065 FBXO3Q9UK99 471 aa16.78■□□□□ 0.28
ARID4A-209ENST00000466065 SPDYE1Q8NFV5 336 aaPredicted RBP16.76■□□□□ 0.27
ARID4A-209ENST00000466065 STAG3Q9UJ98 1225 aa16.74■□□□□ 0.27
ARID4A-209ENST00000466065 PITPNM1O00562 1244 aa16.69■□□□□ 0.26
ARID4A-209ENST00000466065 CLEC11AQ9Y240 323 aa16.67■□□□□ 0.26
ARID4A-209ENST00000466065 VASPP50552 380 aaPredicted RBP16.57■□□□□ 0.24
ARID4A-209ENST00000466065 PRR29P0C7W0 189 aa16.55■□□□□ 0.24
ARID4A-209ENST00000466065 CHRDL2Q6WN34 429 aa16.5■□□□□ 0.23
ARID4A-209ENST00000466065 MIER1Q8N108 512 aa16.44■□□□□ 0.22
ARID4A-209ENST00000466065 PLCD3Q8N3E9 789 aa16.4■□□□□ 0.22
ARID4A-209ENST00000466065 CREBZFQ9NS37 354 aa16.4■□□□□ 0.22
ARID4A-209ENST00000466065 FXR2P51116 673 aaKnown RBP eCLIP16.39■□□□□ 0.21
ARID4A-209ENST00000466065 IFNLR1Q8IU57 520 aaPredicted RBP16.38■□□□□ 0.21
ARID4A-209ENST00000466065 PIP4P2Q8N4L2 257 aa16.32■□□□□ 0.2
ARID4A-209ENST00000466065 CHADLQ6NUI6 762 aa16.3■□□□□ 0.2
ARID4A-209ENST00000466065 PLEKHG5O94827 1062 aa16.29■□□□□ 0.2
ARID4A-209ENST00000466065 PRKAR2AP13861 404 aaKnown RBP16.27■□□□□ 0.2
ARID4A-209ENST00000466065 MNX1P50219 401 aaPredicted RBP16.26■□□□□ 0.19
ARID4A-209ENST00000466065 KLHL34Q8N239 644 aa16.24■□□□□ 0.19
ARID4A-209ENST00000466065 ZBTB47Q9UFB7 747 aaPredicted RBP16.21■□□□□ 0.19
ARID4A-209ENST00000466065 FARP1Q9Y4F1 1045 aaPredicted RBP16.15■□□□□ 0.18
ARID4A-209ENST00000466065 SPOCK2Q92563 424 aa16.14■□□□□ 0.17
ARID4A-209ENST00000466065 NPM1P06748 294 aaKnown RBP eCLIP16.07■□□□□ 0.16
ARID4A-209ENST00000466065 NUBP1P53384 320 aa16.06■□□□□ 0.16
ARID4A-209ENST00000466065 AMER1Q5JTC6 1135 aaPredicted RBP15.99■□□□□ 0.15
ARID4A-209ENST00000466065 RTN4Q9NQC3 1192 aaKnown RBP15.98■□□□□ 0.15
ARID4A-209ENST00000466065 RASEFQ8IZ41 740 aa15.96■□□□□ 0.15
ARID4A-209ENST00000466065 POTEHQ6S545 545 aa15.91■□□□□ 0.14
ARID4A-209ENST00000466065 PKD2Q13563 968 aa15.87■□□□□ 0.13
ARID4A-209ENST00000466065 DCAF8Q5TAQ9 597 aa15.86■□□□□ 0.13
ARID4A-209ENST00000466065 FAM212AQ96EL1 285 aa15.86■□□□□ 0.13
ARID4A-209ENST00000466065 CIZ1Q9ULV3 898 aaPredicted RBP15.86■□□□□ 0.13
ARID4A-209ENST00000466065 GSE1Q14687 1217 aa15.85■□□□□ 0.13
ARID4A-209ENST00000466065 C19orf67A6NJJ6 358 aa15.83■□□□□ 0.12
ARID4A-209ENST00000466065 TSPYL2Q9H2G4 693 aaPredicted RBP15.82■□□□□ 0.12
ARID4A-209ENST00000466065 CD44P16070 742 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms