RNA–Protein interactions for RNA: ENST00000465942.1

COG3-202, Transcript of component of oligomeric golgi complex 3, humanhuman

TSL 3

Gene COG3, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG3-202ENST00000465942 AEBP2Q6ZN18 517 aaPredicted RBP24■■□□□ 1.43
COG3-202ENST00000465942 CHIC1Q5VXU3 224 aa23.41■■□□□ 1.34
COG3-202ENST00000465942 SENP3Q9H4L4 574 aaPredicted RBP20.54■□□□□ 0.88
COG3-202ENST00000465942 PHF23Q9BUL5 403 aaPredicted RBP20.5■□□□□ 0.87
COG3-202ENST00000465942 PLPPR3Q6T4P5 718 aa19.01■□□□□ 0.63
COG3-202ENST00000465942 FOXD1Q16676 465 aa18.97■□□□□ 0.63
COG3-202ENST00000465942 PPP6R1Q9UPN7 881 aa18.11■□□□□ 0.49
COG3-202ENST00000465942 ADRA2BP18089 450 aa18.1■□□□□ 0.49
COG3-202ENST00000465942 PIAS4Q8N2W9 510 aaPredicted RBP17.9■□□□□ 0.46
COG3-202ENST00000465942 MSH5O43196 834 aa17.67■□□□□ 0.42
COG3-202ENST00000465942 SCAF1Q9H7N4 1312 aaKnown RBP16.75■□□□□ 0.27
COG3-202ENST00000465942 PPP4R3CPQ6ZMV5 832 aa16.68■□□□□ 0.26
COG3-202ENST00000465942 MAPK8IP2Q13387 824 aaPredicted RBP16.44■□□□□ 0.22
COG3-202ENST00000465942 DMRT2Q9Y5R5 561 aa16.34■□□□□ 0.21
COG3-202ENST00000465942 NCBP3Q53F19 620 aaKnown RBP16.3■□□□□ 0.2
COG3-202ENST00000465942 CNKSR2Q8WXI2 1034 aa16.29■□□□□ 0.2
COG3-202ENST00000465942 POTEDQ86YR6 584 aa16.21■□□□□ 0.19
COG3-202ENST00000465942 KCNA4P22459 653 aa16.08■□□□□ 0.16
COG3-202ENST00000465942 RNF216Q9NWF9 866 aaPredicted RBP16.01■□□□□ 0.15
COG3-202ENST00000465942 HOXD11P31277 338 aaPredicted RBP15.96■□□□□ 0.15
COG3-202ENST00000465942 NPM3O75607 178 aaKnown RBP15.94■□□□□ 0.14
COG3-202ENST00000465942 DNAJC5BQ9UF47 199 aa15.63■□□□□ 0.09
COG3-202ENST00000465942 DCAF8L1A6NGE4 600 aa15.6■□□□□ 0.09
COG3-202ENST00000465942 SLC4A1APQ9BWU0 796 aaKnown RBP15.36■□□□□ 0.05
COG3-202ENST00000465942 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.21■□□□□ 0.036e-8■■■■□ 19.4
COG3-202ENST00000465942 RNF39Q9H2S5 420 aa15.07■□□□□ 0
COG3-202ENST00000465942 SLC4A2P04920 1241 aa15.06■□□□□ 0
COG3-202ENST00000465942 C1QBPQ07021 282 aaKnown RBP14.94□□□□□ -0.02
COG3-202ENST00000465942 FOXD4L1Q9NU39 408 aa14.92□□□□□ -0.02
COG3-202ENST00000465942 U3KPZ7 1027 aaPredicted RBP14.9□□□□□ -0.02
COG3-202ENST00000465942 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.82□□□□□ -0.04
COG3-202ENST00000465942 HNRNPUL2Q1KMD3 747 aaKnown RBP14.82□□□□□ -0.04
COG3-202ENST00000465942 MYCNP04198 464 aaPredicted RBP14.8□□□□□ -0.04
COG3-202ENST00000465942 CACNB1Q02641 598 aaPredicted RBP14.78□□□□□ -0.04
COG3-202ENST00000465942 ZBTB22O15209 634 aa14.75□□□□□ -0.05
COG3-202ENST00000465942 APLP2Q06481 763 aa14.73□□□□□ -0.05
COG3-202ENST00000465942 SAMD1Q6SPF0 538 aaPredicted RBP14.72□□□□□ -0.05
COG3-202ENST00000465942 EHMT2Q96KQ7 1210 aa14.68□□□□□ -0.06
COG3-202ENST00000465942 CSRNP3Q8WYN3 585 aa14.61□□□□□ -0.07
COG3-202ENST00000465942 CAPN15O75808 1086 aa14.5□□□□□ -0.09
COG3-202ENST00000465942 ATXN8OSP0DMR3 200 aa14.49□□□□□ -0.09
COG3-202ENST00000465942 SPINK5Q9NQ38 1064 aaPredicted RBP14.48□□□□□ -0.09
COG3-202ENST00000465942 ZNF219Q9P2Y4 722 aaPredicted RBP14.46□□□□□ -0.09
COG3-202ENST00000465942 TRHP20396 242 aaPredicted RBP14.38□□□□□ -0.11
COG3-202ENST00000465942 DSG3P32926 999 aa14.28□□□□□ -0.12
COG3-202ENST00000465942 ATF5Q9Y2D1 282 aaPredicted RBP14.28□□□□□ -0.12
COG3-202ENST00000465942 ABCB7O75027 752 aa14.14□□□□□ -0.15
COG3-202ENST00000465942 POLA2Q14181 598 aa14.13□□□□□ -0.15
COG3-202ENST00000465942 ZBTB12Q9Y330 459 aaPredicted RBP14.01□□□□□ -0.17
COG3-202ENST00000465942 FBLN2P98095 1184 aa13.85□□□□□ -0.19
COG3-202ENST00000465942 RBM42Q9BTD8 480 aaKnown RBP13.72□□□□□ -0.21
COG3-202ENST00000465942 MKRN4PQ13434 485 aaPredicted RBP13.68□□□□□ -0.22
COG3-202ENST00000465942 OSCARQ8IYS5 282 aa13.62□□□□□ -0.23
COG3-202ENST00000465942 SPDYE2BA6NHP3 402 aa13.57□□□□□ -0.24
COG3-202ENST00000465942 SPDYE6P0CI01 402 aa13.57□□□□□ -0.24
COG3-202ENST00000465942 SPDYE2Q495Y8 402 aa13.57□□□□□ -0.24
COG3-202ENST00000465942 AKT1S1Q96B36 256 aa13.49□□□□□ -0.25
COG3-202ENST00000465942 ZNF692Q9BU19 519 aaPredicted RBP13.46□□□□□ -0.25
COG3-202ENST00000465942 SSUH2Q9Y2M2 353 aa13.4□□□□□ -0.26
COG3-202ENST00000465942 SPDYE4A6NLX3 237 aa13.38□□□□□ -0.27
COG3-202ENST00000465942 REM2Q8IYK8 340 aaPredicted RBP13.3□□□□□ -0.28
COG3-202ENST00000465942 PABPN1Q86U42 306 aaKnown RBP eCLIP13.24□□□□□ -0.29
COG3-202ENST00000465942 FKBP8Q14318 412 aa13.23□□□□□ -0.29
COG3-202ENST00000465942 SPDYE1Q8NFV5 336 aaPredicted RBP13.21□□□□□ -0.29
COG3-202ENST00000465942 PROM2Q8N271 834 aa13.14□□□□□ -0.31
COG3-202ENST00000465942 PITPNM1O00562 1244 aa13.12□□□□□ -0.31
COG3-202ENST00000465942 STAG3Q9UJ98 1225 aa13.12□□□□□ -0.31
COG3-202ENST00000465942 CHRDL2Q6WN34 429 aa13.11□□□□□ -0.31
COG3-202ENST00000465942 CLEC11AQ9Y240 323 aa13.08□□□□□ -0.32
COG3-202ENST00000465942 PRR29P0C7W0 189 aa12.99□□□□□ -0.33
COG3-202ENST00000465942 FXR2P51116 673 aaKnown RBP eCLIP12.94□□□□□ -0.34
COG3-202ENST00000465942 FBXO3Q9UK99 471 aa12.93□□□□□ -0.34
COG3-202ENST00000465942 PIP4P2Q8N4L2 257 aa12.89□□□□□ -0.35
COG3-202ENST00000465942 POTEHQ6S545 545 aa12.84□□□□□ -0.35
COG3-202ENST00000465942 PRKAR2AP13861 404 aaKnown RBP12.81□□□□□ -0.36
COG3-202ENST00000465942 NISCHQ9Y2I1 1504 aa12.78□□□□□ -0.36
COG3-202ENST00000465942 PLEKHG5O94827 1062 aa12.77□□□□□ -0.37
COG3-202ENST00000465942 CREBZFQ9NS37 354 aa12.74□□□□□ -0.37
COG3-202ENST00000465942 MIER1Q8N108 512 aa12.72□□□□□ -0.37
COG3-202ENST00000465942 CHADLQ6NUI6 762 aa12.71□□□□□ -0.37
COG3-202ENST00000465942 PLCD3Q8N3E9 789 aa12.69□□□□□ -0.38
COG3-202ENST00000465942 VASPP50552 380 aaPredicted RBP12.66□□□□□ -0.38
COG3-202ENST00000465942 FARP1Q9Y4F1 1045 aaPredicted RBP12.66□□□□□ -0.38
COG3-202ENST00000465942 ZBTB47Q9UFB7 747 aaPredicted RBP12.65□□□□□ -0.38
COG3-202ENST00000465942 NPM1P06748 294 aaKnown RBP eCLIP12.64□□□□□ -0.39
COG3-202ENST00000465942 MNX1P50219 401 aaPredicted RBP12.57□□□□□ -0.4
COG3-202ENST00000465942 HAX1O00165 279 aa12.54□□□□□ -0.4
COG3-202ENST00000465942 C19orf67A6NJJ6 358 aa12.5□□□□□ -0.41
COG3-202ENST00000465942 KLHL34Q8N239 644 aa12.49□□□□□ -0.41
COG3-202ENST00000465942 PAK3O75914 559 aaPredicted RBP12.45□□□□□ -0.42
COG3-202ENST00000465942 CD44P16070 742 aaKnown RBP12.44□□□□□ -0.42
COG3-202ENST00000465942 IFNLR1Q8IU57 520 aaPredicted RBP12.44□□□□□ -0.42
COG3-202ENST00000465942 SPOCK2Q92563 424 aa12.39□□□□□ -0.43
COG3-202ENST00000465942 NUBP1P53384 320 aa12.38□□□□□ -0.43
COG3-202ENST00000465942 CLCN6P51797 869 aa12.35□□□□□ -0.43
COG3-202ENST00000465942 FAM212AQ96EL1 285 aa12.34□□□□□ -0.43
COG3-202ENST00000465942 ZRANB1Q9UGI0 708 aa12.34□□□□□ -0.43
COG3-202ENST00000465942 RASEFQ8IZ41 740 aa12.33□□□□□ -0.44
COG3-202ENST00000465942 EVX2Q03828 476 aa12.32□□□□□ -0.44
COG3-202ENST00000465942 SP7Q8TDD2 431 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms