RNA–Protein interactions for RNA: ENST00000465366.1

PCNP-203, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

TSL 2

Gene PCNP, Length 771 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-203ENST00000465366 AEBP2Q6ZN18 517 aaPredicted RBP24.87■■□□□ 1.57
PCNP-203ENST00000465366 CHIC1Q5VXU3 224 aa23.39■■□□□ 1.33
PCNP-203ENST00000465366 SENP3Q9H4L4 574 aaPredicted RBP21.18■□□□□ 0.98
PCNP-203ENST00000465366 PHF23Q9BUL5 403 aaPredicted RBP20.89■□□□□ 0.93
PCNP-203ENST00000465366 FOXD1Q16676 465 aa19.8■□□□□ 0.76
PCNP-203ENST00000465366 PLPPR3Q6T4P5 718 aa18.58■□□□□ 0.56
PCNP-203ENST00000465366 MSH5O43196 834 aa18.55■□□□□ 0.56
PCNP-203ENST00000465366 POTEDQ86YR6 584 aa18.48■□□□□ 0.55
PCNP-203ENST00000465366 PIAS4Q8N2W9 510 aaPredicted RBP18.46■□□□□ 0.55
PCNP-203ENST00000465366 PPP6R1Q9UPN7 881 aa18.39■□□□□ 0.53
PCNP-203ENST00000465366 ADRA2BP18089 450 aa18.32■□□□□ 0.52
PCNP-203ENST00000465366 MAPK8IP2Q13387 824 aaPredicted RBP16.89■□□□□ 0.29
PCNP-203ENST00000465366 DMRT2Q9Y5R5 561 aa16.79■□□□□ 0.28
PCNP-203ENST00000465366 SCAF1Q9H7N4 1312 aaKnown RBP16.67■□□□□ 0.26
PCNP-203ENST00000465366 PPP4R3CPQ6ZMV5 832 aa16.29■□□□□ 0.2
PCNP-203ENST00000465366 DCAF8L1A6NGE4 600 aa16.12■□□□□ 0.17
PCNP-203ENST00000465366 HOXD11P31277 338 aaPredicted RBP16.08■□□□□ 0.16
PCNP-203ENST00000465366 CACNB1Q02641 598 aaPredicted RBP16.06■□□□□ 0.16
PCNP-203ENST00000465366 CNKSR2Q8WXI2 1034 aa16■□□□□ 0.15
PCNP-203ENST00000465366 RNF216Q9NWF9 866 aaPredicted RBP15.9■□□□□ 0.14
PCNP-203ENST00000465366 RNF39Q9H2S5 420 aa15.84■□□□□ 0.13
PCNP-203ENST00000465366 C1QBPQ07021 282 aaKnown RBP15.56■□□□□ 0.08
PCNP-203ENST00000465366 NCBP3Q53F19 620 aaKnown RBP15.56■□□□□ 0.08
PCNP-203ENST00000465366 DNAJC5BQ9UF47 199 aa15.5■□□□□ 0.07
PCNP-203ENST00000465366 NPM3O75607 178 aaKnown RBP15.4■□□□□ 0.06
PCNP-203ENST00000465366 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.33■□□□□ 0.043e-12■■■□□ 15
PCNP-203ENST00000465366 U3KPZ7 1027 aaPredicted RBP15.02■□□□□ -0
PCNP-203ENST00000465366 KCNA4P22459 653 aa14.96□□□□□ -0.01
PCNP-203ENST00000465366 SPINK5Q9NQ38 1064 aaPredicted RBP14.87□□□□□ -0.03
PCNP-203ENST00000465366 CAPN15O75808 1086 aa14.82□□□□□ -0.04
PCNP-203ENST00000465366 DSG3P32926 999 aa14.78□□□□□ -0.04
PCNP-203ENST00000465366 SLC4A2P04920 1241 aa14.77□□□□□ -0.05
PCNP-203ENST00000465366 TRHP20396 242 aaPredicted RBP14.55□□□□□ -0.08
PCNP-203ENST00000465366 ABCB7O75027 752 aa14.5□□□□□ -0.09
PCNP-203ENST00000465366 APLP2Q06481 763 aa14.48□□□□□ -0.09
PCNP-203ENST00000465366 ZNF219Q9P2Y4 722 aaPredicted RBP14.47□□□□□ -0.09
PCNP-203ENST00000465366 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.44□□□□□ -0.1
PCNP-203ENST00000465366 HNRNPUL2Q1KMD3 747 aaKnown RBP14.44□□□□□ -0.1
PCNP-203ENST00000465366 POTEHQ6S545 545 aa14.43□□□□□ -0.1
PCNP-203ENST00000465366 SAMD1Q6SPF0 538 aaPredicted RBP14.37□□□□□ -0.11
PCNP-203ENST00000465366 MYCNP04198 464 aaPredicted RBP14.22□□□□□ -0.13
PCNP-203ENST00000465366 POLA2Q14181 598 aa14.1□□□□□ -0.15
PCNP-203ENST00000465366 RBM42Q9BTD8 480 aaKnown RBP14.06□□□□□ -0.16
PCNP-203ENST00000465366 SLC4A1APQ9BWU0 796 aaKnown RBP14.05□□□□□ -0.16
PCNP-203ENST00000465366 FOXD4L1Q9NU39 408 aa13.98□□□□□ -0.17
PCNP-203ENST00000465366 ATF5Q9Y2D1 282 aaPredicted RBP13.96□□□□□ -0.17
PCNP-203ENST00000465366 CHRDL2Q6WN34 429 aa13.87□□□□□ -0.19
PCNP-203ENST00000465366 ZBTB22O15209 634 aa13.78□□□□□ -0.2
PCNP-203ENST00000465366 ZBTB12Q9Y330 459 aaPredicted RBP13.76□□□□□ -0.21
PCNP-203ENST00000465366 AKT1S1Q96B36 256 aa13.71□□□□□ -0.21
PCNP-203ENST00000465366 OSCARQ8IYS5 282 aa13.7□□□□□ -0.22
PCNP-203ENST00000465366 REM2Q8IYK8 340 aaPredicted RBP13.61□□□□□ -0.23
PCNP-203ENST00000465366 ATXN8OSP0DMR3 200 aa13.52□□□□□ -0.25
PCNP-203ENST00000465366 PIP4P2Q8N4L2 257 aa13.52□□□□□ -0.25
PCNP-203ENST00000465366 PITPNM1O00562 1244 aa13.49□□□□□ -0.25
PCNP-203ENST00000465366 SP7Q8TDD2 431 aaPredicted RBP13.44□□□□□ -0.26
PCNP-203ENST00000465366 EHMT2Q96KQ7 1210 aa13.44□□□□□ -0.26
PCNP-203ENST00000465366 FXR2P51116 673 aaKnown RBP eCLIP13.38□□□□□ -0.27
PCNP-203ENST00000465366 FBLN2P98095 1184 aa13.36□□□□□ -0.27
PCNP-203ENST00000465366 SPDYE2BA6NHP3 402 aa13.34□□□□□ -0.27
PCNP-203ENST00000465366 SPDYE6P0CI01 402 aa13.34□□□□□ -0.27
PCNP-203ENST00000465366 SPDYE2Q495Y8 402 aa13.34□□□□□ -0.27
PCNP-203ENST00000465366 MKRN4PQ13434 485 aaPredicted RBP13.3□□□□□ -0.28
PCNP-203ENST00000465366 HAX1O00165 279 aa13.29□□□□□ -0.28
PCNP-203ENST00000465366 CSRNP3Q8WYN3 585 aa13.21□□□□□ -0.29
PCNP-203ENST00000465366 EVX2Q03828 476 aa13.17□□□□□ -0.3
PCNP-203ENST00000465366 CLEC11AQ9Y240 323 aa13.17□□□□□ -0.3
PCNP-203ENST00000465366 SSUH2Q9Y2M2 353 aa13.17□□□□□ -0.3
PCNP-203ENST00000465366 ZNF692Q9BU19 519 aaPredicted RBP13.16□□□□□ -0.3
PCNP-203ENST00000465366 SPDYE1Q8NFV5 336 aaPredicted RBP13.15□□□□□ -0.3
PCNP-203ENST00000465366 PRKAR2AP13861 404 aaKnown RBP13.13□□□□□ -0.31
PCNP-203ENST00000465366 PABPN1Q86U42 306 aaKnown RBP eCLIP12.98□□□□□ -0.33
PCNP-203ENST00000465366 CHADLQ6NUI6 762 aa12.97□□□□□ -0.33
PCNP-203ENST00000465366 C19orf67A6NJJ6 358 aa12.96□□□□□ -0.33
PCNP-203ENST00000465366 PRR29P0C7W0 189 aa12.9□□□□□ -0.34
PCNP-203ENST00000465366 GABBR2O75899 941 aa12.82□□□□□ -0.36
PCNP-203ENST00000465366 SLC24A1O60721 1099 aa12.72□□□□□ -0.37
PCNP-203ENST00000465366 FARP1Q9Y4F1 1045 aaPredicted RBP12.72□□□□□ -0.37
PCNP-203ENST00000465366 CD44P16070 742 aaKnown RBP12.7□□□□□ -0.38
PCNP-203ENST00000465366 LHX8Q68G74 356 aa12.59□□□□□ -0.39
PCNP-203ENST00000465366 POTEIP0CG38 1075 aa12.58□□□□□ -0.4
PCNP-203ENST00000465366 CREBZFQ9NS37 354 aa12.57□□□□□ -0.4
PCNP-203ENST00000465366 SPDYE4A6NLX3 237 aa12.55□□□□□ -0.4
PCNP-203ENST00000465366 STAG3Q9UJ98 1225 aa12.52□□□□□ -0.41
PCNP-203ENST00000465366 ZRANB1Q9UGI0 708 aa12.49□□□□□ -0.41
PCNP-203ENST00000465366 ZNF579Q8NAF0 562 aaKnown RBP12.48□□□□□ -0.41
PCNP-203ENST00000465366 CLCN6P51797 869 aa12.46□□□□□ -0.41
PCNP-203ENST00000465366 DCBLD2Q96PD2 775 aa12.42□□□□□ -0.42
PCNP-203ENST00000465366 GALR2O43603 387 aaPredicted RBP12.38□□□□□ -0.43
PCNP-203ENST00000465366 MNX1P50219 401 aaPredicted RBP12.33□□□□□ -0.44
PCNP-203ENST00000465366 PHF12Q96QT6 1004 aa12.33□□□□□ -0.44
PCNP-203ENST00000465366 PAK3O75914 559 aaPredicted RBP12.31□□□□□ -0.44
PCNP-203ENST00000465366 NPM1P06748 294 aaKnown RBP eCLIP12.27□□□□□ -0.45
PCNP-203ENST00000465366 PROM2Q8N271 834 aa12.22□□□□□ -0.45
PCNP-203ENST00000465366 POTEB2H3BUK9 544 aa12.17□□□□□ -0.46
PCNP-203ENST00000465366 RTN4Q9NQC3 1192 aaKnown RBP12.17□□□□□ -0.46
PCNP-203ENST00000465366 PELP1Q8IZL8 1130 aaKnown RBP12.16□□□□□ -0.46
PCNP-203ENST00000465366 MS4A3Q96HJ5 214 aa12.16□□□□□ -0.46
PCNP-203ENST00000465366 OTUD5Q96G74 571 aa12.13□□□□□ -0.47
PCNP-203ENST00000465366 AMER1Q5JTC6 1135 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms