RNA–Protein interactions for RNA: ENST00000465362.1

COPS8-206, Transcript of COP9 signalosome subunit 8, humanhuman

TSL 2

Gene COPS8, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS8-206ENST00000465362 AEBP2Q6ZN18 517 aaPredicted RBP27.44■■□□□ 1.98
COPS8-206ENST00000465362 CHIC1Q5VXU3 224 aa25.81■■□□□ 1.72
COPS8-206ENST00000465362 SENP3Q9H4L4 574 aaPredicted RBP23.37■■□□□ 1.33
COPS8-206ENST00000465362 PHF23Q9BUL5 403 aaPredicted RBP23.08■■□□□ 1.29
COPS8-206ENST00000465362 FOXD1Q16676 465 aa21.86■■□□□ 1.09
COPS8-206ENST00000465362 PLPPR3Q6T4P5 718 aa20.5■□□□□ 0.87
COPS8-206ENST00000465362 MSH5O43196 834 aa20.48■□□□□ 0.87
COPS8-206ENST00000465362 POTEDQ86YR6 584 aa20.42■□□□□ 0.86
COPS8-206ENST00000465362 PIAS4Q8N2W9 510 aaPredicted RBP20.34■□□□□ 0.85
COPS8-206ENST00000465362 PPP6R1Q9UPN7 881 aa20.3■□□□□ 0.84
COPS8-206ENST00000465362 ADRA2BP18089 450 aa20.21■□□□□ 0.83
COPS8-206ENST00000465362 MAPK8IP2Q13387 824 aaPredicted RBP18.65■□□□□ 0.58
COPS8-206ENST00000465362 DMRT2Q9Y5R5 561 aa18.52■□□□□ 0.56
COPS8-206ENST00000465362 SCAF1Q9H7N4 1312 aaKnown RBP18.42■□□□□ 0.54
COPS8-206ENST00000465362 PPP4R3CPQ6ZMV5 832 aa17.96■□□□□ 0.47
COPS8-206ENST00000465362 DCAF8L1A6NGE4 600 aa17.77■□□□□ 0.44
COPS8-206ENST00000465362 HOXD11P31277 338 aaPredicted RBP17.76■□□□□ 0.43
COPS8-206ENST00000465362 CACNB1Q02641 598 aaPredicted RBP17.73■□□□□ 0.43
COPS8-206ENST00000465362 CNKSR2Q8WXI2 1034 aa17.66■□□□□ 0.42
COPS8-206ENST00000465362 RNF216Q9NWF9 866 aaPredicted RBP17.55■□□□□ 0.4
COPS8-206ENST00000465362 RNF39Q9H2S5 420 aa17.49■□□□□ 0.39
COPS8-206ENST00000465362 C1QBPQ07021 282 aaKnown RBP17.2■□□□□ 0.34
COPS8-206ENST00000465362 DNAJC5BQ9UF47 199 aa17.16■□□□□ 0.34
COPS8-206ENST00000465362 NCBP3Q53F19 620 aaKnown RBP17.15■□□□□ 0.34
COPS8-206ENST00000465362 NPM3O75607 178 aaKnown RBP16.97■□□□□ 0.31
COPS8-206ENST00000465362 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.9■□□□□ 0.3
COPS8-206ENST00000465362 U3KPZ7 1027 aaPredicted RBP16.56■□□□□ 0.24
COPS8-206ENST00000465362 KCNA4P22459 653 aa16.45■□□□□ 0.22
COPS8-206ENST00000465362 SPINK5Q9NQ38 1064 aaPredicted RBP16.4■□□□□ 0.22
COPS8-206ENST00000465362 CAPN15O75808 1086 aa16.34■□□□□ 0.21
COPS8-206ENST00000465362 DSG3P32926 999 aa16.32■□□□□ 0.2
COPS8-206ENST00000465362 SLC4A2P04920 1241 aa16.28■□□□□ 0.2
COPS8-206ENST00000465362 TRHP20396 242 aaPredicted RBP16.03■□□□□ 0.16
COPS8-206ENST00000465362 APLP2Q06481 763 aa15.98■□□□□ 0.15
COPS8-206ENST00000465362 ABCB7O75027 752 aa15.96■□□□□ 0.15
COPS8-206ENST00000465362 ZNF219Q9P2Y4 722 aaPredicted RBP15.96■□□□□ 0.15
COPS8-206ENST00000465362 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.94■□□□□ 0.14
COPS8-206ENST00000465362 HNRNPUL2Q1KMD3 747 aaKnown RBP15.94■□□□□ 0.14
COPS8-206ENST00000465362 POTEHQ6S545 545 aa15.94■□□□□ 0.14
COPS8-206ENST00000465362 SAMD1Q6SPF0 538 aaPredicted RBP15.85■□□□□ 0.13
COPS8-206ENST00000465362 MYCNP04198 464 aaPredicted RBP15.66■□□□□ 0.1
COPS8-206ENST00000465362 POLA2Q14181 598 aa15.56■□□□□ 0.08
COPS8-206ENST00000465362 RBM42Q9BTD8 480 aaKnown RBP15.52■□□□□ 0.08
COPS8-206ENST00000465362 SLC4A1APQ9BWU0 796 aaKnown RBP15.46■□□□□ 0.07
COPS8-206ENST00000465362 FOXD4L1Q9NU39 408 aa15.39■□□□□ 0.05
COPS8-206ENST00000465362 ATF5Q9Y2D1 282 aaPredicted RBP15.38■□□□□ 0.05
COPS8-206ENST00000465362 CHRDL2Q6WN34 429 aa15.3■□□□□ 0.04
COPS8-206ENST00000465362 ZBTB12Q9Y330 459 aaPredicted RBP15.16■□□□□ 0.02
COPS8-206ENST00000465362 ZBTB22O15209 634 aa15.14■□□□□ 0.01
COPS8-206ENST00000465362 AKT1S1Q96B36 256 aa15.14■□□□□ 0.01
COPS8-206ENST00000465362 OSCARQ8IYS5 282 aa15.07■□□□□ 0
COPS8-206ENST00000465362 REM2Q8IYK8 340 aaPredicted RBP15.02■□□□□ -0
COPS8-206ENST00000465362 ATXN8OSP0DMR3 200 aa14.92□□□□□ -0.02
COPS8-206ENST00000465362 PIP4P2Q8N4L2 257 aa14.9□□□□□ -0.02
COPS8-206ENST00000465362 PITPNM1O00562 1244 aa14.87□□□□□ -0.03
COPS8-206ENST00000465362 SP7Q8TDD2 431 aaPredicted RBP14.84□□□□□ -0.03
COPS8-206ENST00000465362 FXR2P51116 673 aaKnown RBP eCLIP14.78□□□□□ -0.04
COPS8-206ENST00000465362 SPDYE2BA6NHP3 402 aa14.71□□□□□ -0.05
COPS8-206ENST00000465362 SPDYE6P0CI01 402 aa14.71□□□□□ -0.05
COPS8-206ENST00000465362 FBLN2P98095 1184 aa14.71□□□□□ -0.05
COPS8-206ENST00000465362 SPDYE2Q495Y8 402 aa14.71□□□□□ -0.05
COPS8-206ENST00000465362 HAX1O00165 279 aa14.69□□□□□ -0.06
COPS8-206ENST00000465362 MKRN4PQ13434 485 aaPredicted RBP14.65□□□□□ -0.06
COPS8-206ENST00000465362 EVX2Q03828 476 aa14.54□□□□□ -0.08
COPS8-206ENST00000465362 ZNF692Q9BU19 519 aaPredicted RBP14.52□□□□□ -0.09
COPS8-206ENST00000465362 CLEC11AQ9Y240 323 aa14.52□□□□□ -0.09
COPS8-206ENST00000465362 SSUH2Q9Y2M2 353 aa14.51□□□□□ -0.09
COPS8-206ENST00000465362 SPDYE1Q8NFV5 336 aaPredicted RBP14.5□□□□□ -0.09
COPS8-206ENST00000465362 PRKAR2AP13861 404 aaKnown RBP14.48□□□□□ -0.09
COPS8-206ENST00000465362 C19orf67A6NJJ6 358 aa14.31□□□□□ -0.12
COPS8-206ENST00000465362 CHADLQ6NUI6 762 aa14.3□□□□□ -0.12
COPS8-206ENST00000465362 PABPN1Q86U42 306 aaKnown RBP eCLIP14.3□□□□□ -0.12
COPS8-206ENST00000465362 PRR29P0C7W0 189 aa14.24□□□□□ -0.13
COPS8-206ENST00000465362 CSRNP3Q8WYN3 585 aa14.24□□□□□ -0.13
COPS8-206ENST00000465362 GABBR2O75899 941 aa14.17□□□□□ -0.14
COPS8-206ENST00000465362 FARP1Q9Y4F1 1045 aaPredicted RBP14.03□□□□□ -0.16
COPS8-206ENST00000465362 CD44P16070 742 aaKnown RBP14□□□□□ -0.17
COPS8-206ENST00000465362 LHX8Q68G74 356 aa13.92□□□□□ -0.18
COPS8-206ENST00000465362 EHMT2Q96KQ7 1210 aa13.92□□□□□ -0.18
COPS8-206ENST00000465362 POTEIP0CG38 1075 aa13.89□□□□□ -0.19
COPS8-206ENST00000465362 CREBZFQ9NS37 354 aa13.85□□□□□ -0.19
COPS8-206ENST00000465362 STAG3Q9UJ98 1225 aa13.83□□□□□ -0.2
COPS8-206ENST00000465362 SPDYE4A6NLX3 237 aa13.81□□□□□ -0.2
COPS8-206ENST00000465362 CLCN6P51797 869 aa13.8□□□□□ -0.2
COPS8-206ENST00000465362 ZNF579Q8NAF0 562 aaKnown RBP13.76□□□□□ -0.21
COPS8-206ENST00000465362 ZRANB1Q9UGI0 708 aa13.76□□□□□ -0.21
COPS8-206ENST00000465362 DCBLD2Q96PD2 775 aa13.7□□□□□ -0.22
COPS8-206ENST00000465362 GALR2O43603 387 aaPredicted RBP13.64□□□□□ -0.23
COPS8-206ENST00000465362 MNX1P50219 401 aaPredicted RBP13.6□□□□□ -0.23
COPS8-206ENST00000465362 PHF12Q96QT6 1004 aa13.57□□□□□ -0.24
COPS8-206ENST00000465362 PAK3O75914 559 aaPredicted RBP13.56□□□□□ -0.24
COPS8-206ENST00000465362 NPM1P06748 294 aaKnown RBP eCLIP13.55□□□□□ -0.24
COPS8-206ENST00000465362 PROM2Q8N271 834 aa13.46□□□□□ -0.25
COPS8-206ENST00000465362 POTEB2H3BUK9 544 aa13.44□□□□□ -0.26
COPS8-206ENST00000465362 PELP1Q8IZL8 1130 aaKnown RBP13.42□□□□□ -0.26
COPS8-206ENST00000465362 OTUD5Q96G74 571 aa13.4□□□□□ -0.26
COPS8-206ENST00000465362 MS4A3Q96HJ5 214 aa13.38□□□□□ -0.27
COPS8-206ENST00000465362 TSPYL2Q9H2G4 693 aaPredicted RBP13.34□□□□□ -0.27
COPS8-206ENST00000465362 ASTLQ6HA08 431 aaPredicted RBP13.33□□□□□ -0.28
COPS8-206ENST00000465362 ATMINO43313 823 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms