RNA–Protein interactions for RNA: ENST00000464840.5

NT5C3A-210, Transcript of 5'-nucleotidase, cytosolic IIIA, humanhuman

TSL 3

Gene NT5C3A, Length 580 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NT5C3A-210ENST00000464840 AEBP2Q6ZN18 517 aaPredicted RBP31.38■■■□□ 2.61
NT5C3A-210ENST00000464840 CHIC1Q5VXU3 224 aa29.49■■■□□ 2.31
NT5C3A-210ENST00000464840 SENP3Q9H4L4 574 aaPredicted RBP26.9■■□□□ 1.9
NT5C3A-210ENST00000464840 PHF23Q9BUL5 403 aaPredicted RBP26.48■■□□□ 1.83
NT5C3A-210ENST00000464840 FOXD1Q16676 465 aa25.07■■□□□ 1.6
NT5C3A-210ENST00000464840 POTEDQ86YR6 584 aa23.67■■□□□ 1.38
NT5C3A-210ENST00000464840 MSH5O43196 834 aa23.66■■□□□ 1.38
NT5C3A-210ENST00000464840 PLPPR3Q6T4P5 718 aa23.43■■□□□ 1.34
NT5C3A-210ENST00000464840 PIAS4Q8N2W9 510 aaPredicted RBP23.38■■□□□ 1.33
NT5C3A-210ENST00000464840 PPP6R1Q9UPN7 881 aa23.13■■□□□ 1.29
NT5C3A-210ENST00000464840 ADRA2BP18089 450 aa23.06■■□□□ 1.28
NT5C3A-210ENST00000464840 MAPK8IP2Q13387 824 aaPredicted RBP21.28■■□□□ 1
NT5C3A-210ENST00000464840 DMRT2Q9Y5R5 561 aa21.25■□□□□ 0.99
NT5C3A-210ENST00000464840 SCAF1Q9H7N4 1312 aaKnown RBP21.19■□□□□ 0.98
NT5C3A-210ENST00000464840 CACNB1Q02641 598 aaPredicted RBP20.53■□□□□ 0.88
NT5C3A-210ENST00000464840 PPP4R3CPQ6ZMV5 832 aa20.47■□□□□ 0.87
NT5C3A-210ENST00000464840 DCAF8L1A6NGE4 600 aa20.45■□□□□ 0.86
NT5C3A-210ENST00000464840 HOXD11P31277 338 aaPredicted RBP20.32■□□□□ 0.84
NT5C3A-210ENST00000464840 CNKSR2Q8WXI2 1034 aa20.19■□□□□ 0.82
NT5C3A-210ENST00000464840 RNF39Q9H2S5 420 aa20.11■□□□□ 0.81
NT5C3A-210ENST00000464840 RNF216Q9NWF9 866 aaPredicted RBP20.08■□□□□ 0.81
NT5C3A-210ENST00000464840 C1QBPQ07021 282 aaKnown RBP19.84■□□□□ 0.77
NT5C3A-210ENST00000464840 DNAJC5BQ9UF47 199 aa19.72■□□□□ 0.75
NT5C3A-210ENST00000464840 NCBP3Q53F19 620 aaKnown RBP19.62■□□□□ 0.73
NT5C3A-210ENST00000464840 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.41■□□□□ 0.73e-6■■■■□ 20.1
NT5C3A-210ENST00000464840 NPM3O75607 178 aaKnown RBP19.27■□□□□ 0.68
NT5C3A-210ENST00000464840 U3KPZ7 1027 aaPredicted RBP18.91■□□□□ 0.62
NT5C3A-210ENST00000464840 CAPN15O75808 1086 aa18.78■□□□□ 0.6
NT5C3A-210ENST00000464840 SPINK5Q9NQ38 1064 aaPredicted RBP18.74■□□□□ 0.59
NT5C3A-210ENST00000464840 DSG3P32926 999 aa18.72■□□□□ 0.59
NT5C3A-210ENST00000464840 KCNA4P22459 653 aa18.57■□□□□ 0.56
NT5C3A-210ENST00000464840 POTEHQ6S545 545 aa18.49■□□□□ 0.55
NT5C3A-210ENST00000464840 SLC4A2P04920 1241 aa18.48■□□□□ 0.55
NT5C3A-210ENST00000464840 APLP2Q06481 763 aa18.44■□□□□ 0.54
NT5C3A-210ENST00000464840 TRHP20396 242 aaPredicted RBP18.39■□□□□ 0.53
NT5C3A-210ENST00000464840 ZNF219Q9P2Y4 722 aaPredicted RBP18.35■□□□□ 0.53
NT5C3A-210ENST00000464840 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.32■□□□□ 0.52
NT5C3A-210ENST00000464840 HNRNPUL2Q1KMD3 747 aaKnown RBP18.32■□□□□ 0.52
NT5C3A-210ENST00000464840 ABCB7O75027 752 aa18.29■□□□□ 0.52
NT5C3A-210ENST00000464840 SAMD1Q6SPF0 538 aaPredicted RBP18.19■□□□□ 0.5
NT5C3A-210ENST00000464840 RBM42Q9BTD8 480 aaKnown RBP17.93■□□□□ 0.46
NT5C3A-210ENST00000464840 MYCNP04198 464 aaPredicted RBP17.87■□□□□ 0.45
NT5C3A-210ENST00000464840 POLA2Q14181 598 aa17.79■□□□□ 0.44
NT5C3A-210ENST00000464840 CHRDL2Q6WN34 429 aa17.64■□□□□ 0.41
NT5C3A-210ENST00000464840 SLC4A1APQ9BWU0 796 aaKnown RBP17.5■□□□□ 0.39
NT5C3A-210ENST00000464840 FOXD4L1Q9NU39 408 aa17.49■□□□□ 0.39
NT5C3A-210ENST00000464840 ZBTB12Q9Y330 459 aaPredicted RBP17.44■□□□□ 0.38
NT5C3A-210ENST00000464840 AKT1S1Q96B36 256 aa17.42■□□□□ 0.38
NT5C3A-210ENST00000464840 ATF5Q9Y2D1 282 aaPredicted RBP17.42■□□□□ 0.38
NT5C3A-210ENST00000464840 REM2Q8IYK8 340 aaPredicted RBP17.23■□□□□ 0.35
NT5C3A-210ENST00000464840 OSCARQ8IYS5 282 aa17.23■□□□□ 0.35
NT5C3A-210ENST00000464840 SP7Q8TDD2 431 aaPredicted RBP17.17■□□□□ 0.34
NT5C3A-210ENST00000464840 PIP4P2Q8N4L2 257 aa17.12■□□□□ 0.33
NT5C3A-210ENST00000464840 PITPNM1O00562 1244 aa17.04■□□□□ 0.32
NT5C3A-210ENST00000464840 ZBTB22O15209 634 aa17.03■□□□□ 0.32
NT5C3A-210ENST00000464840 ATXN8OSP0DMR3 200 aa16.98■□□□□ 0.31
NT5C3A-210ENST00000464840 FXR2P51116 673 aaKnown RBP eCLIP16.97■□□□□ 0.31
NT5C3A-210ENST00000464840 HAX1O00165 279 aa16.96■□□□□ 0.31
NT5C3A-210ENST00000464840 SPDYE2BA6NHP3 402 aa16.86■□□□□ 0.29
NT5C3A-210ENST00000464840 SPDYE6P0CI01 402 aa16.86■□□□□ 0.29
NT5C3A-210ENST00000464840 FBLN2P98095 1184 aa16.86■□□□□ 0.29
NT5C3A-210ENST00000464840 SPDYE2Q495Y8 402 aa16.86■□□□□ 0.29
NT5C3A-210ENST00000464840 SPDYE1Q8NFV5 336 aaPredicted RBP16.66■□□□□ 0.26
NT5C3A-210ENST00000464840 CLEC11AQ9Y240 323 aa16.66■□□□□ 0.26
NT5C3A-210ENST00000464840 EVX2Q03828 476 aa16.64■□□□□ 0.25
NT5C3A-210ENST00000464840 PRKAR2AP13861 404 aaKnown RBP16.62■□□□□ 0.25
NT5C3A-210ENST00000464840 MKRN4PQ13434 485 aaPredicted RBP16.61■□□□□ 0.25
NT5C3A-210ENST00000464840 ZNF692Q9BU19 519 aaPredicted RBP16.6■□□□□ 0.25
NT5C3A-210ENST00000464840 SSUH2Q9Y2M2 353 aa16.56■□□□□ 0.24
NT5C3A-210ENST00000464840 C19orf67A6NJJ6 358 aa16.44■□□□□ 0.22
NT5C3A-210ENST00000464840 CHADLQ6NUI6 762 aa16.34■□□□□ 0.21
NT5C3A-210ENST00000464840 PRR29P0C7W0 189 aa16.33■□□□□ 0.2
NT5C3A-210ENST00000464840 PABPN1Q86U42 306 aaKnown RBP eCLIP16.33■□□□□ 0.2
NT5C3A-210ENST00000464840 GABBR2O75899 941 aa16.29■□□□□ 0.2
NT5C3A-210ENST00000464840 LHX8Q68G74 356 aa16.11■□□□□ 0.17
NT5C3A-210ENST00000464840 CD44P16070 742 aaKnown RBP16.08■□□□□ 0.16
NT5C3A-210ENST00000464840 FARP1Q9Y4F1 1045 aaPredicted RBP16.07■□□□□ 0.16
NT5C3A-210ENST00000464840 CLCN6P51797 869 aa15.97■□□□□ 0.15
NT5C3A-210ENST00000464840 CSRNP3Q8WYN3 585 aa15.94■□□□□ 0.14
NT5C3A-210ENST00000464840 POTEIP0CG38 1075 aa15.91■□□□□ 0.14
NT5C3A-210ENST00000464840 STAG3Q9UJ98 1225 aa15.85■□□□□ 0.13
NT5C3A-210ENST00000464840 DCBLD2Q96PD2 775 aa15.83■□□□□ 0.12
NT5C3A-210ENST00000464840 ZNF579Q8NAF0 562 aaKnown RBP15.8■□□□□ 0.12
NT5C3A-210ENST00000464840 ZRANB1Q9UGI0 708 aa15.8■□□□□ 0.12
NT5C3A-210ENST00000464840 CREBZFQ9NS37 354 aa15.79■□□□□ 0.12
NT5C3A-210ENST00000464840 SPDYE4A6NLX3 237 aa15.69■□□□□ 0.1
NT5C3A-210ENST00000464840 PAK3O75914 559 aaPredicted RBP15.64■□□□□ 0.09
NT5C3A-210ENST00000464840 GALR2O43603 387 aaPredicted RBP15.61■□□□□ 0.09
NT5C3A-210ENST00000464840 EHMT2Q96KQ7 1210 aa15.57■□□□□ 0.08
NT5C3A-210ENST00000464840 NPM1P06748 294 aaKnown RBP eCLIP15.56■□□□□ 0.08
NT5C3A-210ENST00000464840 PHF12Q96QT6 1004 aa15.52■□□□□ 0.08
NT5C3A-210ENST00000464840 MNX1P50219 401 aaPredicted RBP15.44■□□□□ 0.06
NT5C3A-210ENST00000464840 OTUD5Q96G74 571 aa15.41■□□□□ 0.06
NT5C3A-210ENST00000464840 PLSCR2Q9NRY7 297 aa15.4■□□□□ 0.06
NT5C3A-210ENST00000464840 POTEB2H3BUK9 544 aa15.37■□□□□ 0.05
NT5C3A-210ENST00000464840 PELP1Q8IZL8 1130 aaKnown RBP15.32■□□□□ 0.04
NT5C3A-210ENST00000464840 MS4A3Q96HJ5 214 aa15.31■□□□□ 0.04
NT5C3A-210ENST00000464840 ASTLQ6HA08 431 aaPredicted RBP15.27■□□□□ 0.04
NT5C3A-210ENST00000464840 SLC39A7Q92504 469 aa15.25■□□□□ 0.03
NT5C3A-210ENST00000464840 METRNQ9UJH8 293 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms