RNA–Protein interactions for RNA: ENST00000464806.1

CDC23-203, Transcript of cell division cycle 23, humanhuman

TSL 2

Gene CDC23, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC23-203ENST00000464806 AEBP2Q6ZN18 517 aaPredicted RBP23.16■■□□□ 1.3
CDC23-203ENST00000464806 CHIC1Q5VXU3 224 aa22.69■■□□□ 1.22
CDC23-203ENST00000464806 PHF23Q9BUL5 403 aaPredicted RBP20.03■□□□□ 0.8
CDC23-203ENST00000464806 SENP3Q9H4L4 574 aaPredicted RBP19.52■□□□□ 0.72
CDC23-203ENST00000464806 PLPPR3Q6T4P5 718 aa18.45■□□□□ 0.54
CDC23-203ENST00000464806 FOXD1Q16676 465 aa18.16■□□□□ 0.5
CDC23-203ENST00000464806 PPP6R1Q9UPN7 881 aa17.62■□□□□ 0.41
CDC23-203ENST00000464806 ADRA2BP18089 450 aa17.6■□□□□ 0.41
CDC23-203ENST00000464806 PIAS4Q8N2W9 510 aaPredicted RBP17.15■□□□□ 0.34
CDC23-203ENST00000464806 POTEDQ86YR6 584 aa16.62■□□□□ 0.25
CDC23-203ENST00000464806 MSH5O43196 834 aa16.6■□□□□ 0.25
CDC23-203ENST00000464806 PPP4R3CPQ6ZMV5 832 aa16.31■□□□□ 0.2
CDC23-203ENST00000464806 KCNA4P22459 653 aa16.17■□□□□ 0.18
CDC23-203ENST00000464806 SCAF1Q9H7N4 1312 aaKnown RBP15.94■□□□□ 0.14
CDC23-203ENST00000464806 MAPK8IP2Q13387 824 aaPredicted RBP15.93■□□□□ 0.14
CDC23-203ENST00000464806 NCBP3Q53F19 620 aaKnown RBP15.83■□□□□ 0.12
CDC23-203ENST00000464806 CNKSR2Q8WXI2 1034 aa15.78■□□□□ 0.12
CDC23-203ENST00000464806 NPM3O75607 178 aaKnown RBP15.73■□□□□ 0.11
CDC23-203ENST00000464806 DMRT2Q9Y5R5 561 aa15.64■□□□□ 0.09
CDC23-203ENST00000464806 RNF216Q9NWF9 866 aaPredicted RBP15.44■□□□□ 0.06
CDC23-203ENST00000464806 SLC4A1APQ9BWU0 796 aaKnown RBP15.37■□□□□ 0.05
CDC23-203ENST00000464806 HOXD11P31277 338 aaPredicted RBP15.36■□□□□ 0.05
CDC23-203ENST00000464806 DNAJC5BQ9UF47 199 aa15.18■□□□□ 0.02
CDC23-203ENST00000464806 EHMT2Q96KQ7 1210 aa15.16■□□□□ 0.02
CDC23-203ENST00000464806 DCAF8L1A6NGE4 600 aa14.94□□□□□ -0.02
CDC23-203ENST00000464806 ZBTB22O15209 634 aa14.94□□□□□ -0.02
CDC23-203ENST00000464806 CSRNP3Q8WYN3 585 aa14.9□□□□□ -0.02
CDC23-203ENST00000464806 SLC4A2P04920 1241 aa14.84□□□□□ -0.03
CDC23-203ENST00000464806 FOXD4L1Q9NU39 408 aa14.78□□□□□ -0.04
CDC23-203ENST00000464806 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.61□□□□□ -0.07
CDC23-203ENST00000464806 MYCNP04198 464 aaPredicted RBP14.48□□□□□ -0.09
CDC23-203ENST00000464806 U3KPZ7 1027 aaPredicted RBP14.48□□□□□ -0.09
CDC23-203ENST00000464806 RNF39Q9H2S5 420 aa14.3□□□□□ -0.12
CDC23-203ENST00000464806 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.19□□□□□ -0.14
CDC23-203ENST00000464806 HNRNPUL2Q1KMD3 747 aaKnown RBP14.19□□□□□ -0.14
CDC23-203ENST00000464806 SAMD1Q6SPF0 538 aaPredicted RBP14.19□□□□□ -0.14
CDC23-203ENST00000464806 ATXN8OSP0DMR3 200 aa14.18□□□□□ -0.14
CDC23-203ENST00000464806 ATF5Q9Y2D1 282 aaPredicted RBP14.18□□□□□ -0.14
CDC23-203ENST00000464806 C1QBPQ07021 282 aaKnown RBP14.07□□□□□ -0.16
CDC23-203ENST00000464806 SPINK5Q9NQ38 1064 aaPredicted RBP14.04□□□□□ -0.16
CDC23-203ENST00000464806 APLP2Q06481 763 aa13.98□□□□□ -0.17
CDC23-203ENST00000464806 CACNB1Q02641 598 aaPredicted RBP13.97□□□□□ -0.17
CDC23-203ENST00000464806 CAPN15O75808 1086 aa13.9□□□□□ -0.18
CDC23-203ENST00000464806 TRHP20396 242 aaPredicted RBP13.88□□□□□ -0.19
CDC23-203ENST00000464806 ZNF219Q9P2Y4 722 aaPredicted RBP13.86□□□□□ -0.19
CDC23-203ENST00000464806 ABCB7O75027 752 aa13.72□□□□□ -0.21
CDC23-203ENST00000464806 POLA2Q14181 598 aa13.69□□□□□ -0.22
CDC23-203ENST00000464806 DSG3P32926 999 aa13.66□□□□□ -0.22
CDC23-203ENST00000464806 MKRN4PQ13434 485 aaPredicted RBP13.56□□□□□ -0.24
CDC23-203ENST00000464806 FKBP8Q14318 412 aa13.45□□□□□ -0.26
CDC23-203ENST00000464806 FBLN2P98095 1184 aa13.43□□□□□ -0.26
CDC23-203ENST00000464806 ZBTB12Q9Y330 459 aaPredicted RBP13.41□□□□□ -0.26
CDC23-203ENST00000464806 OSCARQ8IYS5 282 aa13.28□□□□□ -0.28
CDC23-203ENST00000464806 SPDYE4A6NLX3 237 aa13.26□□□□□ -0.29
CDC23-203ENST00000464806 PROM2Q8N271 834 aa13.1□□□□□ -0.31
CDC23-203ENST00000464806 SPDYE2BA6NHP3 402 aa13.09□□□□□ -0.31
CDC23-203ENST00000464806 SPDYE6P0CI01 402 aa13.09□□□□□ -0.31
CDC23-203ENST00000464806 SPDYE2Q495Y8 402 aa13.09□□□□□ -0.31
CDC23-203ENST00000464806 ZNF692Q9BU19 519 aaPredicted RBP13.07□□□□□ -0.32
CDC23-203ENST00000464806 SSUH2Q9Y2M2 353 aa13.07□□□□□ -0.32
CDC23-203ENST00000464806 PABPN1Q86U42 306 aaKnown RBP eCLIP12.94□□□□□ -0.34
CDC23-203ENST00000464806 RBM42Q9BTD8 480 aaKnown RBP12.93□□□□□ -0.34
CDC23-203ENST00000464806 POTEHQ6S545 545 aa12.86□□□□□ -0.35
CDC23-203ENST00000464806 AKT1S1Q96B36 256 aa12.83□□□□□ -0.36
CDC23-203ENST00000464806 FBXO3Q9UK99 471 aa12.82□□□□□ -0.36
CDC23-203ENST00000464806 VASPP50552 380 aaPredicted RBP12.75□□□□□ -0.37
CDC23-203ENST00000464806 REM2Q8IYK8 340 aaPredicted RBP12.74□□□□□ -0.37
CDC23-203ENST00000464806 SPDYE1Q8NFV5 336 aaPredicted RBP12.66□□□□□ -0.38
CDC23-203ENST00000464806 STAG3Q9UJ98 1225 aa12.65□□□□□ -0.38
CDC23-203ENST00000464806 PITPNM1O00562 1244 aa12.64□□□□□ -0.39
CDC23-203ENST00000464806 CLEC11AQ9Y240 323 aa12.63□□□□□ -0.39
CDC23-203ENST00000464806 IFNLR1Q8IU57 520 aaPredicted RBP12.6□□□□□ -0.39
CDC23-203ENST00000464806 RTN4Q9NQC3 1192 aaKnown RBP12.55□□□□□ -0.4
CDC23-203ENST00000464806 PLCD3Q8N3E9 789 aa12.52□□□□□ -0.41
CDC23-203ENST00000464806 PRR29P0C7W0 189 aa12.5□□□□□ -0.41
CDC23-203ENST00000464806 MIER1Q8N108 512 aa12.5□□□□□ -0.41
CDC23-203ENST00000464806 AMER1Q5JTC6 1135 aaPredicted RBP12.47□□□□□ -0.41
CDC23-203ENST00000464806 CREBZFQ9NS37 354 aa12.45□□□□□ -0.42
CDC23-203ENST00000464806 KLHL34Q8N239 644 aa12.42□□□□□ -0.42
CDC23-203ENST00000464806 CHRDL2Q6WN34 429 aa12.39□□□□□ -0.43
CDC23-203ENST00000464806 PLEKHG5O94827 1062 aa12.36□□□□□ -0.43
CDC23-203ENST00000464806 MNX1P50219 401 aaPredicted RBP12.36□□□□□ -0.43
CDC23-203ENST00000464806 CHADLQ6NUI6 762 aa12.36□□□□□ -0.43
CDC23-203ENST00000464806 SPOCK2Q92563 424 aa12.36□□□□□ -0.43
CDC23-203ENST00000464806 FXR2P51116 673 aaKnown RBP eCLIP12.33□□□□□ -0.44
CDC23-203ENST00000464806 ZBTB47Q9UFB7 747 aaPredicted RBP12.31□□□□□ -0.44
CDC23-203ENST00000464806 PIP4P2Q8N4L2 257 aa12.3□□□□□ -0.44
CDC23-203ENST00000464806 PRKAR2AP13861 404 aaKnown RBP12.29□□□□□ -0.44
CDC23-203ENST00000464806 NUBP1P53384 320 aa12.25□□□□□ -0.45
CDC23-203ENST00000464806 PKD2Q13563 968 aa12.24□□□□□ -0.45
CDC23-203ENST00000464806 FARP1Q9Y4F1 1045 aaPredicted RBP12.21□□□□□ -0.45
CDC23-203ENST00000464806 RASEFQ8IZ41 740 aa12.19□□□□□ -0.46
CDC23-203ENST00000464806 CIZ1Q9ULV3 898 aaPredicted RBP12.15□□□□□ -0.46
CDC23-203ENST00000464806 NPM1P06748 294 aaKnown RBP eCLIP12.14□□□□□ -0.47
CDC23-203ENST00000464806 ECM2O94769 699 aaPredicted RBP12.09□□□□□ -0.47
CDC23-203ENST00000464806 FAM212AQ96EL1 285 aa12.09□□□□□ -0.47
CDC23-203ENST00000464806 DCAF8Q5TAQ9 597 aa12.07□□□□□ -0.48
CDC23-203ENST00000464806 GSE1Q14687 1217 aa12.06□□□□□ -0.48
CDC23-203ENST00000464806 TSPYL2Q9H2G4 693 aaPredicted RBP12.04□□□□□ -0.48
CDC23-203ENST00000464806 RGL2O15211 777 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms