RNA–Protein interactions for RNA: ENST00000464652.1

SCN5A-211, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 591 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-211ENST00000464652 AEBP2Q6ZN18 517 aaPredicted RBP26.86■■□□□ 1.89
SCN5A-211ENST00000464652 CHIC1Q5VXU3 224 aa25.98■■□□□ 1.75
SCN5A-211ENST00000464652 SENP3Q9H4L4 574 aaPredicted RBP22.94■■□□□ 1.26
SCN5A-211ENST00000464652 PHF23Q9BUL5 403 aaPredicted RBP22.76■■□□□ 1.23
SCN5A-211ENST00000464652 FOXD1Q16676 465 aa21.27■■□□□ 1
SCN5A-211ENST00000464652 PLPPR3Q6T4P5 718 aa21■□□□□ 0.95
SCN5A-211ENST00000464652 PPP6R1Q9UPN7 881 aa20.19■□□□□ 0.82
SCN5A-211ENST00000464652 ADRA2BP18089 450 aa20.18■□□□□ 0.82
SCN5A-211ENST00000464652 PIAS4Q8N2W9 510 aaPredicted RBP20.02■□□□□ 0.8
SCN5A-211ENST00000464652 MSH5O43196 834 aa19.81■□□□□ 0.76
SCN5A-211ENST00000464652 SCAF1Q9H7N4 1312 aaKnown RBP18.57■□□□□ 0.56
SCN5A-211ENST00000464652 POTEDQ86YR6 584 aa18.54■□□□□ 0.56
SCN5A-211ENST00000464652 PPP4R3CPQ6ZMV5 832 aa18.44■□□□□ 0.54
SCN5A-211ENST00000464652 MAPK8IP2Q13387 824 aaPredicted RBP18.38■□□□□ 0.53
SCN5A-211ENST00000464652 DMRT2Q9Y5R5 561 aa18.23■□□□□ 0.51
SCN5A-211ENST00000464652 CNKSR2Q8WXI2 1034 aa18.01■□□□□ 0.47
SCN5A-211ENST00000464652 NCBP3Q53F19 620 aaKnown RBP17.93■□□□□ 0.46
SCN5A-211ENST00000464652 RNF216Q9NWF9 866 aaPredicted RBP17.73■□□□□ 0.43
SCN5A-211ENST00000464652 HOXD11P31277 338 aaPredicted RBP17.72■□□□□ 0.43
SCN5A-211ENST00000464652 KCNA4P22459 653 aa17.61■□□□□ 0.41
SCN5A-211ENST00000464652 NPM3O75607 178 aaKnown RBP17.58■□□□□ 0.4
SCN5A-211ENST00000464652 DCAF8L1A6NGE4 600 aa17.51■□□□□ 0.39
SCN5A-211ENST00000464652 DNAJC5BQ9UF47 199 aa17.12■□□□□ 0.33
SCN5A-211ENST00000464652 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.94■□□□□ 0.3
SCN5A-211ENST00000464652 RNF39Q9H2S5 420 aa16.89■□□□□ 0.29
SCN5A-211ENST00000464652 SLC4A1APQ9BWU0 796 aaKnown RBP16.76■□□□□ 0.27
SCN5A-211ENST00000464652 CACNB1Q02641 598 aaPredicted RBP16.74■□□□□ 0.27
SCN5A-211ENST00000464652 C1QBPQ07021 282 aaKnown RBP16.72■□□□□ 0.27
SCN5A-211ENST00000464652 SLC4A2P04920 1241 aa16.65■□□□□ 0.26
SCN5A-211ENST00000464652 U3KPZ7 1027 aaPredicted RBP16.56■□□□□ 0.24
SCN5A-211ENST00000464652 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.35■□□□□ 0.21
SCN5A-211ENST00000464652 HNRNPUL2Q1KMD3 747 aaKnown RBP16.35■□□□□ 0.21
SCN5A-211ENST00000464652 FOXD4L1Q9NU39 408 aa16.35■□□□□ 0.21
SCN5A-211ENST00000464652 MYCNP04198 464 aaPredicted RBP16.3■□□□□ 0.2
SCN5A-211ENST00000464652 APLP2Q06481 763 aa16.29■□□□□ 0.2
SCN5A-211ENST00000464652 SAMD1Q6SPF0 538 aaPredicted RBP16.25■□□□□ 0.19
SCN5A-211ENST00000464652 CAPN15O75808 1086 aa16.21■□□□□ 0.19
SCN5A-211ENST00000464652 SPINK5Q9NQ38 1064 aaPredicted RBP16.19■□□□□ 0.18
SCN5A-211ENST00000464652 ZBTB22O15209 634 aa16.15■□□□□ 0.18
SCN5A-211ENST00000464652 ZNF219Q9P2Y4 722 aaPredicted RBP16.06■□□□□ 0.16
SCN5A-211ENST00000464652 TRHP20396 242 aaPredicted RBP16.05■□□□□ 0.16
SCN5A-211ENST00000464652 DSG3P32926 999 aa15.97■□□□□ 0.15
SCN5A-211ENST00000464652 EHMT2Q96KQ7 1210 aa15.89■□□□□ 0.13
SCN5A-211ENST00000464652 CSRNP3Q8WYN3 585 aa15.84■□□□□ 0.13
SCN5A-211ENST00000464652 ABCB7O75027 752 aa15.83■□□□□ 0.12
SCN5A-211ENST00000464652 ATXN8OSP0DMR3 200 aa15.83■□□□□ 0.12
SCN5A-211ENST00000464652 ATF5Q9Y2D1 282 aaPredicted RBP15.8■□□□□ 0.12
SCN5A-211ENST00000464652 POLA2Q14181 598 aa15.69■□□□□ 0.1
SCN5A-211ENST00000464652 ZBTB12Q9Y330 459 aaPredicted RBP15.48■□□□□ 0.07
SCN5A-211ENST00000464652 RBM42Q9BTD8 480 aaKnown RBP15.31■□□□□ 0.04
SCN5A-211ENST00000464652 FBLN2P98095 1184 aa15.28■□□□□ 0.04
SCN5A-211ENST00000464652 OSCARQ8IYS5 282 aa15.16■□□□□ 0.02
SCN5A-211ENST00000464652 MKRN4PQ13434 485 aaPredicted RBP15.1■□□□□ 0.01
SCN5A-211ENST00000464652 AKT1S1Q96B36 256 aa15.02■□□□□ -0
SCN5A-211ENST00000464652 SPDYE2BA6NHP3 402 aa15.01□□□□□ -0.01
SCN5A-211ENST00000464652 SPDYE6P0CI01 402 aa15.01□□□□□ -0.01
SCN5A-211ENST00000464652 SPDYE2Q495Y8 402 aa15.01□□□□□ -0.01
SCN5A-211ENST00000464652 ZNF692Q9BU19 519 aaPredicted RBP14.9□□□□□ -0.02
SCN5A-211ENST00000464652 REM2Q8IYK8 340 aaPredicted RBP14.84□□□□□ -0.03
SCN5A-211ENST00000464652 SSUH2Q9Y2M2 353 aa14.81□□□□□ -0.04
SCN5A-211ENST00000464652 CHRDL2Q6WN34 429 aa14.74□□□□□ -0.05
SCN5A-211ENST00000464652 SPDYE4A6NLX3 237 aa14.68□□□□□ -0.06
SCN5A-211ENST00000464652 PITPNM1O00562 1244 aa14.66□□□□□ -0.06
SCN5A-211ENST00000464652 PABPN1Q86U42 306 aaKnown RBP eCLIP14.66□□□□□ -0.06
SCN5A-211ENST00000464652 SPDYE1Q8NFV5 336 aaPredicted RBP14.65□□□□□ -0.06
SCN5A-211ENST00000464652 POTEHQ6S545 545 aa14.64□□□□□ -0.07
SCN5A-211ENST00000464652 CLEC11AQ9Y240 323 aa14.59□□□□□ -0.07
SCN5A-211ENST00000464652 FXR2P51116 673 aaKnown RBP eCLIP14.46□□□□□ -0.09
SCN5A-211ENST00000464652 PIP4P2Q8N4L2 257 aa14.46□□□□□ -0.09
SCN5A-211ENST00000464652 STAG3Q9UJ98 1225 aa14.43□□□□□ -0.1
SCN5A-211ENST00000464652 PRR29P0C7W0 189 aa14.42□□□□□ -0.1
SCN5A-211ENST00000464652 FKBP8Q14318 412 aa14.38□□□□□ -0.11
SCN5A-211ENST00000464652 PROM2Q8N271 834 aa14.34□□□□□ -0.11
SCN5A-211ENST00000464652 PRKAR2AP13861 404 aaKnown RBP14.32□□□□□ -0.12
SCN5A-211ENST00000464652 CHADLQ6NUI6 762 aa14.22□□□□□ -0.13
SCN5A-211ENST00000464652 HAX1O00165 279 aa14.14□□□□□ -0.15
SCN5A-211ENST00000464652 CREBZFQ9NS37 354 aa14.1□□□□□ -0.15
SCN5A-211ENST00000464652 FARP1Q9Y4F1 1045 aaPredicted RBP14.07□□□□□ -0.16
SCN5A-211ENST00000464652 FBXO3Q9UK99 471 aa14.02□□□□□ -0.17
SCN5A-211ENST00000464652 PLEKHG5O94827 1062 aa14.01□□□□□ -0.17
SCN5A-211ENST00000464652 C19orf67A6NJJ6 358 aa13.98□□□□□ -0.17
SCN5A-211ENST00000464652 MIER1Q8N108 512 aa13.98□□□□□ -0.17
SCN5A-211ENST00000464652 NPM1P06748 294 aaKnown RBP eCLIP13.95□□□□□ -0.18
SCN5A-211ENST00000464652 PLCD3Q8N3E9 789 aa13.94□□□□□ -0.18
SCN5A-211ENST00000464652 SP7Q8TDD2 431 aaPredicted RBP13.94□□□□□ -0.18
SCN5A-211ENST00000464652 CD44P16070 742 aaKnown RBP13.9□□□□□ -0.18
SCN5A-211ENST00000464652 MNX1P50219 401 aaPredicted RBP13.89□□□□□ -0.19
SCN5A-211ENST00000464652 EVX2Q03828 476 aa13.89□□□□□ -0.19
SCN5A-211ENST00000464652 ZBTB47Q9UFB7 747 aaPredicted RBP13.84□□□□□ -0.19
SCN5A-211ENST00000464652 PAK3O75914 559 aaPredicted RBP13.81□□□□□ -0.2
SCN5A-211ENST00000464652 VASPP50552 380 aaPredicted RBP13.78□□□□□ -0.2
SCN5A-211ENST00000464652 ZRANB1Q9UGI0 708 aa13.77□□□□□ -0.21
SCN5A-211ENST00000464652 ZNF579Q8NAF0 562 aaKnown RBP13.7□□□□□ -0.22
SCN5A-211ENST00000464652 CLCN6P51797 869 aa13.69□□□□□ -0.22
SCN5A-211ENST00000464652 GABBR2O75899 941 aa13.67□□□□□ -0.22
SCN5A-211ENST00000464652 KLHL34Q8N239 644 aa13.67□□□□□ -0.22
SCN5A-211ENST00000464652 TSPYL2Q9H2G4 693 aaPredicted RBP13.67□□□□□ -0.22
SCN5A-211ENST00000464652 RASEFQ8IZ41 740 aa13.61□□□□□ -0.23
SCN5A-211ENST00000464652 NUBP1P53384 320 aa13.6□□□□□ -0.23
SCN5A-211ENST00000464652 PHF12Q96QT6 1004 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms