RNA–Protein interactions for RNA: ENST00000464581.5

CHEK2-222, Transcript of checkpoint kinase 2, human

TSL 2

Gene CHEK2, Length 425 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-222	ENST00000464581	AEBP2	Q6ZN18	517 aa	Predicted RBP	22.82	■■□□□ 1.24
CHEK2-222	ENST00000464581	CHIC1	Q5VXU3	224 aa		21.49	■■□□□ 1.03
CHEK2-222	ENST00000464581	SENP3	Q9H4L4	574 aa	Predicted RBP	19.73	■□□□□ 0.75
CHEK2-222	ENST00000464581	PHF23	Q9BUL5	403 aa	Predicted RBP	19.3	■□□□□ 0.68
CHEK2-222	ENST00000464581	FOXD1	Q16676	465 aa		18.37	■□□□□ 0.53
CHEK2-222	ENST00000464581	POTED	Q86YR6	584 aa		18.19	■□□□□ 0.5
CHEK2-222	ENST00000464581	MSH5	O43196	834 aa		17.58	■□□□□ 0.4
CHEK2-222	ENST00000464581	PIAS4	Q8N2W9	510 aa	Predicted RBP	17.06	■□□□□ 0.32
CHEK2-222	ENST00000464581	PLPPR3	Q6T4P5	718 aa		16.62	■□□□□ 0.25
CHEK2-222	ENST00000464581	PPP6R1	Q9UPN7	881 aa		16.59	■□□□□ 0.25
CHEK2-222	ENST00000464581	ADRA2B	P18089	450 aa		16.53	■□□□□ 0.24
CHEK2-222	ENST00000464581	DMRT2	Q9Y5R5	561 aa		15.5	■□□□□ 0.07
CHEK2-222	ENST00000464581	CACNB1	Q02641	598 aa	Predicted RBP	15.46	■□□□□ 0.07
CHEK2-222	ENST00000464581	MAPK8IP2	Q13387	824 aa	Predicted RBP	15.36	■□□□□ 0.05
CHEK2-222	ENST00000464581	SCAF1	Q9H7N4	1312 aa	Known RBP	15.32	■□□□□ 0.04
CHEK2-222	ENST00000464581	DCAF8L1	A6NGE4	600 aa		14.93	□□□□□ -0.02
CHEK2-222	ENST00000464581	RNF39	Q9H2S5	420 aa		14.86	□□□□□ -0.03
CHEK2-222	ENST00000464581	C1QBP	Q07021	282 aa	Known RBP	14.67	□□□□□ -0.06
CHEK2-222	ENST00000464581	HOXD11	P31277	338 aa	Predicted RBP	14.66	□□□□□ -0.06
CHEK2-222	ENST00000464581	PPP4R3CP	Q6ZMV5	832 aa		14.42	□□□□□ -0.1
CHEK2-222	ENST00000464581	RNF216	Q9NWF9	866 aa	Predicted RBP	14.4	□□□□□ -0.1
CHEK2-222	ENST00000464581	CNKSR2	Q8WXI2	1034 aa		14.36	□□□□□ -0.11
CHEK2-222	ENST00000464581	DNAJC5B	Q9UF47	199 aa		14.36	□□□□□ -0.11
CHEK2-222	ENST00000464581	POTEH	Q6S545	545 aa		14.16	□□□□□ -0.14
CHEK2-222	ENST00000464581	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	14.01	□□□□□ -0.17
CHEK2-222	ENST00000464581	NCBP3	Q53F19	620 aa	Known RBP	13.77	□□□□□ -0.21
CHEK2-222	ENST00000464581	DSG3	P32926	999 aa		13.68	□□□□□ -0.22
CHEK2-222	ENST00000464581	CAPN15	O75808	1086 aa		13.65	□□□□□ -0.22
CHEK2-222	ENST00000464581		U3KPZ7	1027 aa	Predicted RBP	13.57	□□□□□ -0.24
CHEK2-222	ENST00000464581	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.55	□□□□□ -0.24
CHEK2-222	ENST00000464581	NPM3	O75607	178 aa	Known RBP	13.44	□□□□□ -0.26
CHEK2-222	ENST00000464581	APLP2	Q06481	763 aa		13.32	□□□□□ -0.28
CHEK2-222	ENST00000464581	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.27	□□□□□ -0.29
CHEK2-222	ENST00000464581	TRH	P20396	242 aa	Predicted RBP	13.24	□□□□□ -0.29
CHEK2-222	ENST00000464581	ABCB7	O75027	752 aa		13.2	□□□□□ -0.3
CHEK2-222	ENST00000464581	RBM42	Q9BTD8	480 aa	Known RBP	13.19	□□□□□ -0.3
CHEK2-222	ENST00000464581	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	13.11	□□□□□ -0.31
CHEK2-222	ENST00000464581	HNRNPUL2	Q1KMD3	747 aa	Known RBP	13.11	□□□□□ -0.31
CHEK2-222	ENST00000464581	CHRDL2	Q6WN34	429 aa		13.09	□□□□□ -0.31
CHEK2-222	ENST00000464581	SLC4A2	P04920	1241 aa		12.97	□□□□□ -0.33
CHEK2-222	ENST00000464581	SP7	Q8TDD2	431 aa	Predicted RBP	12.97	□□□□□ -0.33
CHEK2-222	ENST00000464581	SAMD1	Q6SPF0	538 aa	Predicted RBP	12.96	□□□□□ -0.33
CHEK2-222	ENST00000464581	POLA2	Q14181	598 aa		12.72	□□□□□ -0.37
CHEK2-222	ENST00000464581	AKT1S1	Q96B36	256 aa		12.69	□□□□□ -0.38
CHEK2-222	ENST00000464581	HAX1	O00165	279 aa		12.6	□□□□□ -0.39
CHEK2-222	ENST00000464581	PIP4P2	Q8N4L2	257 aa		12.6	□□□□□ -0.39
CHEK2-222	ENST00000464581	KCNA4	P22459	653 aa		12.55	□□□□□ -0.4
CHEK2-222	ENST00000464581	MYCN	P04198	464 aa	Predicted RBP	12.53	□□□□□ -0.4
CHEK2-222	ENST00000464581	REM2	Q8IYK8	340 aa	Predicted RBP	12.53	□□□□□ -0.4
CHEK2-222	ENST00000464581	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.53	□□□□□ -0.4
CHEK2-222	ENST00000464581	FXR2	P51116	673 aa	Known RBP eCLIP	12.43	□□□□□ -0.42
CHEK2-222	ENST00000464581	PITPNM1	O00562	1244 aa		12.38	□□□□□ -0.43
CHEK2-222	ENST00000464581	OSCAR	Q8IYS5	282 aa		12.33	□□□□□ -0.44
CHEK2-222	ENST00000464581	EVX2	Q03828	476 aa		12.26	□□□□□ -0.45
CHEK2-222	ENST00000464581	LHX8	Q68G74	356 aa		12.15	□□□□□ -0.46
CHEK2-222	ENST00000464581	ATF5	Q9Y2D1	282 aa	Predicted RBP	12.14	□□□□□ -0.47
CHEK2-222	ENST00000464581	PRKAR2A	P13861	404 aa	Known RBP	12.09	□□□□□ -0.47
CHEK2-222	ENST00000464581	C19orf67	A6NJJ6	358 aa		12.05	□□□□□ -0.48
CHEK2-222	ENST00000464581	SPDYE2B	A6NHP3	402 aa		12.03	□□□□□ -0.48
CHEK2-222	ENST00000464581	GABBR2	O75899	941 aa		12.03	□□□□□ -0.48
CHEK2-222	ENST00000464581	SPDYE6	P0CI01	402 aa		12.03	□□□□□ -0.48
CHEK2-222	ENST00000464581	SPDYE2	Q495Y8	402 aa		12.03	□□□□□ -0.48
CHEK2-222	ENST00000464581	FOXD4L1	Q9NU39	408 aa		12.01	□□□□□ -0.49
CHEK2-222	ENST00000464581	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.99	□□□□□ -0.49
CHEK2-222	ENST00000464581	CLEC11A	Q9Y240	323 aa		11.98	□□□□□ -0.49
CHEK2-222	ENST00000464581	PLSCR2	Q9NRY7	297 aa		11.95	□□□□□ -0.5
CHEK2-222	ENST00000464581	FBLN2	P98095	1184 aa		11.91	□□□□□ -0.5
CHEK2-222	ENST00000464581	SLC4A1AP	Q9BWU0	796 aa	Known RBP	11.79	□□□□□ -0.52
CHEK2-222	ENST00000464581	CLCN6	P51797	869 aa		11.77	□□□□□ -0.53
CHEK2-222	ENST00000464581	ZNF692	Q9BU19	519 aa	Predicted RBP	11.76	□□□□□ -0.53
CHEK2-222	ENST00000464581	CHADL	Q6NUI6	762 aa		11.75	□□□□□ -0.53
CHEK2-222	ENST00000464581	ATXN8OS	P0DMR3	200 aa		11.74	□□□□□ -0.53
CHEK2-222	ENST00000464581	SSUH2	Q9Y2M2	353 aa		11.74	□□□□□ -0.53
CHEK2-222	ENST00000464581	PRR29	P0C7W0	189 aa		11.71	□□□□□ -0.53
CHEK2-222	ENST00000464581	POTEI	P0CG38	1075 aa		11.71	□□□□□ -0.53
CHEK2-222	ENST00000464581	CD44	P16070	742 aa	Known RBP	11.68	□□□□□ -0.54
CHEK2-222	ENST00000464581	DCBLD2	Q96PD2	775 aa		11.65	□□□□□ -0.54
CHEK2-222	ENST00000464581	MKRN4P	Q13434	485 aa	Predicted RBP	11.57	□□□□□ -0.56
CHEK2-222	ENST00000464581	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.56	□□□□□ -0.56
CHEK2-222	ENST00000464581	PABPN1	Q86U42	306 aa	Known RBP eCLIP	11.54	□□□□□ -0.56
CHEK2-222	ENST00000464581	POTEM	A6NI47	508 aa		11.49	□□□□□ -0.57
CHEK2-222	ENST00000464581	ZBTB22	O15209	634 aa		11.47	□□□□□ -0.57
CHEK2-222	ENST00000464581	ZNF579	Q8NAF0	562 aa	Known RBP	11.46	□□□□□ -0.57
CHEK2-222	ENST00000464581	OTUD5	Q96G74	571 aa		11.44	□□□□□ -0.58
CHEK2-222	ENST00000464581	PCDH10	Q9P2E7	1040 aa		11.43	□□□□□ -0.58
CHEK2-222	ENST00000464581	POTEG	Q6S5H5	508 aa		11.42	□□□□□ -0.58
CHEK2-222	ENST00000464581	ZRANB1	Q9UGI0	708 aa		11.4	□□□□□ -0.58
CHEK2-222	ENST00000464581	GALR2	O43603	387 aa	Predicted RBP	11.31	□□□□□ -0.6
CHEK2-222	ENST00000464581	POTEB2	H3BUK9	544 aa		11.3	□□□□□ -0.6
CHEK2-222	ENST00000464581	PAK3	O75914	559 aa	Predicted RBP	11.26	□□□□□ -0.61
CHEK2-222	ENST00000464581	MAMSTR	Q6ZN01	415 aa		11.19	□□□□□ -0.62
CHEK2-222	ENST00000464581	CREBZF	Q9NS37	354 aa		11.18	□□□□□ -0.62
CHEK2-222	ENST00000464581	STAG3	Q9UJ98	1225 aa		11.17	□□□□□ -0.62
CHEK2-222	ENST00000464581	PHF12	Q96QT6	1004 aa		11.14	□□□□□ -0.63
CHEK2-222	ENST00000464581	METRN	Q9UJH8	293 aa		11.13	□□□□□ -0.63
CHEK2-222	ENST00000464581	C7	P10643	843 aa		11.12	□□□□□ -0.63
CHEK2-222	ENST00000464581	PELP1	Q8IZL8	1130 aa	Known RBP	11.12	□□□□□ -0.63
CHEK2-222	ENST00000464581	SLC39A7	Q92504	469 aa		11.12	□□□□□ -0.63
CHEK2-222	ENST00000464581	NPM1	P06748	294 aa	Known RBP eCLIP	11.08	□□□□□ -0.64
CHEK2-222	ENST00000464581	ASTL	Q6HA08	431 aa	Predicted RBP	11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms