RNA–Protein interactions for RNA: ENST00000464537.1

LINC02053-201, Transcript of long intergenic non-protein coding RNA 2053, humanhuman

TSL 3

Gene LINC02053, Length 479 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02053-201ENST00000464537 AEBP2Q6ZN18 517 aaPredicted RBP23.73■■□□□ 1.39
LINC02053-201ENST00000464537 CHIC1Q5VXU3 224 aa23.67■■□□□ 1.38
LINC02053-201ENST00000464537 PHF23Q9BUL5 403 aaPredicted RBP20.95■□□□□ 0.94
LINC02053-201ENST00000464537 SENP3Q9H4L4 574 aaPredicted RBP20.36■□□□□ 0.85
LINC02053-201ENST00000464537 PLPPR3Q6T4P5 718 aa19.44■□□□□ 0.7
LINC02053-201ENST00000464537 POTEDQ86YR6 584 aa18.98■□□□□ 0.63
LINC02053-201ENST00000464537 FOXD1Q16676 465 aa18.96■□□□□ 0.63
LINC02053-201ENST00000464537 ADRA2BP18089 450 aa18.34■□□□□ 0.53
LINC02053-201ENST00000464537 PPP6R1Q9UPN7 881 aa18.31■□□□□ 0.52
LINC02053-201ENST00000464537 MSH5O43196 834 aa18.18■□□□□ 0.5
LINC02053-201ENST00000464537 KCNA4P22459 653 aa17.58■□□□□ 0.4
LINC02053-201ENST00000464537 PIAS4Q8N2W9 510 aaPredicted RBP17.58■□□□□ 0.4
LINC02053-201ENST00000464537 PPP4R3CPQ6ZMV5 832 aa17.26■□□□□ 0.35
LINC02053-201ENST00000464537 EHMT2Q96KQ7 1210 aa17.08■□□□□ 0.32
LINC02053-201ENST00000464537 NCBP3Q53F19 620 aaKnown RBP16.89■□□□□ 0.29
LINC02053-201ENST00000464537 SLC4A1APQ9BWU0 796 aaKnown RBP16.8■□□□□ 0.28
LINC02053-201ENST00000464537 NPM3O75607 178 aaKnown RBP16.75■□□□□ 0.27
LINC02053-201ENST00000464537 SCAF1Q9H7N4 1312 aaKnown RBP16.61■□□□□ 0.25
LINC02053-201ENST00000464537 CNKSR2Q8WXI2 1034 aa16.59■□□□□ 0.25
LINC02053-201ENST00000464537 CSRNP3Q8WYN3 585 aa16.58■□□□□ 0.24
LINC02053-201ENST00000464537 MAPK8IP2Q13387 824 aaPredicted RBP16.47■□□□□ 0.23
LINC02053-201ENST00000464537 ZBTB22O15209 634 aa16.22■□□□□ 0.19
LINC02053-201ENST00000464537 RNF216Q9NWF9 866 aaPredicted RBP16.12■□□□□ 0.17
LINC02053-201ENST00000464537 DNAJC5BQ9UF47 199 aa16.04■□□□□ 0.16
LINC02053-201ENST00000464537 CACNB1Q02641 598 aaPredicted RBP16.03■□□□□ 0.16
LINC02053-201ENST00000464537 DMRT2Q9Y5R5 561 aa16.02■□□□□ 0.16
LINC02053-201ENST00000464537 FOXD4L1Q9NU39 408 aa15.94■□□□□ 0.14
LINC02053-201ENST00000464537 HOXD11P31277 338 aaPredicted RBP15.91■□□□□ 0.14
LINC02053-201ENST00000464537 SLC4A2P04920 1241 aa15.69■□□□□ 0.1
LINC02053-201ENST00000464537 MYCNP04198 464 aaPredicted RBP15.4■□□□□ 0.06
LINC02053-201ENST00000464537 RNF39Q9H2S5 420 aa15.37■□□□□ 0.05
LINC02053-201ENST00000464537 DCAF8L1A6NGE4 600 aa15.35■□□□□ 0.05
LINC02053-201ENST00000464537 ATXN8OSP0DMR3 200 aa15.26■□□□□ 0.03
LINC02053-201ENST00000464537 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.18■□□□□ 0.02
LINC02053-201ENST00000464537 C1QBPQ07021 282 aaKnown RBP15.16■□□□□ 0.02
LINC02053-201ENST00000464537 ATF5Q9Y2D1 282 aaPredicted RBP15.07■□□□□ 0
LINC02053-201ENST00000464537 U3KPZ7 1027 aaPredicted RBP15.05■□□□□ -0
LINC02053-201ENST00000464537 FKBP8Q14318 412 aa14.94□□□□□ -0.02
LINC02053-201ENST00000464537 SAMD1Q6SPF0 538 aaPredicted RBP14.93□□□□□ -0.02
LINC02053-201ENST00000464537 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.91□□□□□ -0.02
LINC02053-201ENST00000464537 HNRNPUL2Q1KMD3 747 aaKnown RBP14.91□□□□□ -0.02
LINC02053-201ENST00000464537 POTEHQ6S545 545 aa14.75□□□□□ -0.05
LINC02053-201ENST00000464537 RTN4Q9NQC3 1192 aaKnown RBP14.68□□□□□ -0.06
LINC02053-201ENST00000464537 ZNF219Q9P2Y4 722 aaPredicted RBP14.68□□□□□ -0.06
LINC02053-201ENST00000464537 APLP2Q06481 763 aa14.6□□□□□ -0.07
LINC02053-201ENST00000464537 AMER1Q5JTC6 1135 aaPredicted RBP14.58□□□□□ -0.08
LINC02053-201ENST00000464537 SPINK5Q9NQ38 1064 aaPredicted RBP14.49□□□□□ -0.09
LINC02053-201ENST00000464537 TRHP20396 242 aaPredicted RBP14.44□□□□□ -0.1
LINC02053-201ENST00000464537 MKRN4PQ13434 485 aaPredicted RBP14.42□□□□□ -0.1
LINC02053-201ENST00000464537 CAPN15O75808 1086 aa14.35□□□□□ -0.11
LINC02053-201ENST00000464537 SPDYE4A6NLX3 237 aa14.33□□□□□ -0.12
LINC02053-201ENST00000464537 POLA2Q14181 598 aa14.33□□□□□ -0.12
LINC02053-201ENST00000464537 FBLN2P98095 1184 aa14.26□□□□□ -0.13
LINC02053-201ENST00000464537 ABCB7O75027 752 aa14.18□□□□□ -0.14
LINC02053-201ENST00000464537 SLC24A1O60721 1099 aa14.17□□□□□ -0.14
LINC02053-201ENST00000464537 PROM2Q8N271 834 aa14.15□□□□□ -0.14
LINC02053-201ENST00000464537 FBXO3Q9UK99 471 aa14.13□□□□□ -0.15
LINC02053-201ENST00000464537 DSG3P32926 999 aa14.11□□□□□ -0.15
LINC02053-201ENST00000464537 ZBTB12Q9Y330 459 aaPredicted RBP14.02□□□□□ -0.17
LINC02053-201ENST00000464537 VASPP50552 380 aaPredicted RBP14.01□□□□□ -0.17
LINC02053-201ENST00000464537 IFNLR1Q8IU57 520 aaPredicted RBP13.9□□□□□ -0.18
LINC02053-201ENST00000464537 OSCARQ8IYS5 282 aa13.84□□□□□ -0.19
LINC02053-201ENST00000464537 ZNF692Q9BU19 519 aaPredicted RBP13.82□□□□□ -0.2
LINC02053-201ENST00000464537 SPDYE2BA6NHP3 402 aa13.73□□□□□ -0.21
LINC02053-201ENST00000464537 SPDYE6P0CI01 402 aa13.73□□□□□ -0.21
LINC02053-201ENST00000464537 SPDYE2Q495Y8 402 aa13.73□□□□□ -0.21
LINC02053-201ENST00000464537 SSUH2Q9Y2M2 353 aa13.73□□□□□ -0.21
LINC02053-201ENST00000464537 PABPN1Q86U42 306 aaKnown RBP eCLIP13.68□□□□□ -0.22
LINC02053-201ENST00000464537 PKD2Q13563 968 aa13.66□□□□□ -0.22
LINC02053-201ENST00000464537 KLHL34Q8N239 644 aa13.63□□□□□ -0.23
LINC02053-201ENST00000464537 DCAF8L2P0C7V8 631 aa13.61□□□□□ -0.23
LINC02053-201ENST00000464537 STAG3Q9UJ98 1225 aa13.61□□□□□ -0.23
LINC02053-201ENST00000464537 RBM42Q9BTD8 480 aaKnown RBP13.6□□□□□ -0.23
LINC02053-201ENST00000464537 SPOCK2Q92563 424 aa13.58□□□□□ -0.24
LINC02053-201ENST00000464537 PLCD3Q8N3E9 789 aa13.56□□□□□ -0.24
LINC02053-201ENST00000464537 CHRDL2Q6WN34 429 aa13.53□□□□□ -0.24
LINC02053-201ENST00000464537 MIER1Q8N108 512 aa13.52□□□□□ -0.25
LINC02053-201ENST00000464537 PLCB2Q00722 1185 aa13.5□□□□□ -0.25
LINC02053-201ENST00000464537 SP7Q8TDD2 431 aaPredicted RBP13.47□□□□□ -0.25
LINC02053-201ENST00000464537 ECM2O94769 699 aaPredicted RBP13.44□□□□□ -0.26
LINC02053-201ENST00000464537 HAP1P54257 671 aaPredicted RBP13.35□□□□□ -0.27
LINC02053-201ENST00000464537 RGL2O15211 777 aa13.34□□□□□ -0.27
LINC02053-201ENST00000464537 NPM1P06748 294 aaKnown RBP eCLIP13.32□□□□□ -0.28
LINC02053-201ENST00000464537 PLEKHG5O94827 1062 aa13.3□□□□□ -0.28
LINC02053-201ENST00000464537 CIZ1Q9ULV3 898 aaPredicted RBP13.3□□□□□ -0.28
LINC02053-201ENST00000464537 ZBTB47Q9UFB7 747 aaPredicted RBP13.27□□□□□ -0.29
LINC02053-201ENST00000464537 BBXQ8WY36 941 aaPredicted RBP13.24□□□□□ -0.29
LINC02053-201ENST00000464537 SPDYE1Q8NFV5 336 aaPredicted RBP13.19□□□□□ -0.3
LINC02053-201ENST00000464537 AKT1S1Q96B36 256 aa13.19□□□□□ -0.3
LINC02053-201ENST00000464537 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.18□□□□□ -0.3
LINC02053-201ENST00000464537 PAXIP1Q6ZW49 1069 aaPredicted RBP13.17□□□□□ -0.3
LINC02053-201ENST00000464537 CLEC11AQ9Y240 323 aa13.17□□□□□ -0.3
LINC02053-201ENST00000464537 CFAP44Q96MT7 982 aa13.15□□□□□ -0.3
LINC02053-201ENST00000464537 NUBP1P53384 320 aa13.13□□□□□ -0.31
LINC02053-201ENST00000464537 CHGAP10645 457 aaKnown RBP13.12□□□□□ -0.31
LINC02053-201ENST00000464537 REM2Q8IYK8 340 aaPredicted RBP13.12□□□□□ -0.31
LINC02053-201ENST00000464537 CREBZFQ9NS37 354 aa13.11□□□□□ -0.31
LINC02053-201ENST00000464537 PRR29P0C7W0 189 aa13.1□□□□□ -0.31
LINC02053-201ENST00000464537 VSIG10Q8N0Z9 540 aa13.09□□□□□ -0.31
LINC02053-201ENST00000464537 TRIM41Q8WV44 630 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms