RNA–Protein interactions for RNA: ENST00000464030.1

HELLS-209, Transcript of helicase, lymphoid specific, humanhuman

TSL 3

Gene HELLS, Length 321 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HELLS-209ENST00000464030 AEBP2Q6ZN18 517 aaPredicted RBP28.75■■■□□ 2.19
HELLS-209ENST00000464030 CHIC1Q5VXU3 224 aa27■■□□□ 1.91
HELLS-209ENST00000464030 SENP3Q9H4L4 574 aaPredicted RBP24.67■■□□□ 1.54
HELLS-209ENST00000464030 PHF23Q9BUL5 403 aaPredicted RBP24.3■■□□□ 1.48
HELLS-209ENST00000464030 FOXD1Q16676 465 aa23■■□□□ 1.27
HELLS-209ENST00000464030 POTEDQ86YR6 584 aa21.77■■□□□ 1.08
HELLS-209ENST00000464030 MSH5O43196 834 aa21.72■■□□□ 1.07
HELLS-209ENST00000464030 PIAS4Q8N2W9 510 aaPredicted RBP21.47■■□□□ 1.03
HELLS-209ENST00000464030 PLPPR3Q6T4P5 718 aa21.46■■□□□ 1.03
HELLS-209ENST00000464030 PPP6R1Q9UPN7 881 aa21.21■□□□□ 0.99
HELLS-209ENST00000464030 ADRA2BP18089 450 aa21.17■□□□□ 0.98
HELLS-209ENST00000464030 MAPK8IP2Q13387 824 aaPredicted RBP19.55■□□□□ 0.72
HELLS-209ENST00000464030 DMRT2Q9Y5R5 561 aa19.47■□□□□ 0.71
HELLS-209ENST00000464030 SCAF1Q9H7N4 1312 aaKnown RBP19.45■□□□□ 0.7
HELLS-209ENST00000464030 CACNB1Q02641 598 aaPredicted RBP18.91■□□□□ 0.62
HELLS-209ENST00000464030 DCAF8L1A6NGE4 600 aa18.85■□□□□ 0.61
HELLS-209ENST00000464030 PPP4R3CPQ6ZMV5 832 aa18.76■□□□□ 0.59
HELLS-209ENST00000464030 HOXD11P31277 338 aaPredicted RBP18.59■□□□□ 0.57
HELLS-209ENST00000464030 CNKSR2Q8WXI2 1034 aa18.49■□□□□ 0.55
HELLS-209ENST00000464030 RNF39Q9H2S5 420 aa18.44■□□□□ 0.54
HELLS-209ENST00000464030 RNF216Q9NWF9 866 aaPredicted RBP18.4■□□□□ 0.54
HELLS-209ENST00000464030 C1QBPQ07021 282 aaKnown RBP18.2■□□□□ 0.5
HELLS-209ENST00000464030 DNAJC5BQ9UF47 199 aa18■□□□□ 0.47
HELLS-209ENST00000464030 NCBP3Q53F19 620 aaKnown RBP17.99■□□□□ 0.47
HELLS-209ENST00000464030 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.84■□□□□ 0.455e-6■■■□□ 17.2
HELLS-209ENST00000464030 NPM3O75607 178 aaKnown RBP17.64■□□□□ 0.41
HELLS-209ENST00000464030 U3KPZ7 1027 aaPredicted RBP17.32■□□□□ 0.36
HELLS-209ENST00000464030 CAPN15O75808 1086 aa17.28■□□□□ 0.36
HELLS-209ENST00000464030 SPINK5Q9NQ38 1064 aaPredicted RBP17.2■□□□□ 0.34
HELLS-209ENST00000464030 DSG3P32926 999 aa17.16■□□□□ 0.34
HELLS-209ENST00000464030 POTEHQ6S545 545 aa17.02■□□□□ 0.32
HELLS-209ENST00000464030 KCNA4P22459 653 aa16.99■□□□□ 0.31
HELLS-209ENST00000464030 TRHP20396 242 aaPredicted RBP16.92■□□□□ 0.3
HELLS-209ENST00000464030 APLP2Q06481 763 aa16.92■□□□□ 0.3
HELLS-209ENST00000464030 SLC4A2P04920 1241 aa16.9■□□□□ 0.3
HELLS-209ENST00000464030 ZNF219Q9P2Y4 722 aaPredicted RBP16.83■□□□□ 0.28
HELLS-209ENST00000464030 ABCB7O75027 752 aa16.82■□□□□ 0.28
HELLS-209ENST00000464030 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.8■□□□□ 0.28
HELLS-209ENST00000464030 HNRNPUL2Q1KMD3 747 aaKnown RBP16.8■□□□□ 0.28
HELLS-209ENST00000464030 SAMD1Q6SPF0 538 aaPredicted RBP16.66■□□□□ 0.26
HELLS-209ENST00000464030 RBM42Q9BTD8 480 aaKnown RBP16.45■□□□□ 0.22
HELLS-209ENST00000464030 MYCNP04198 464 aaPredicted RBP16.35■□□□□ 0.21
HELLS-209ENST00000464030 POLA2Q14181 598 aa16.35■□□□□ 0.21
HELLS-209ENST00000464030 CHRDL2Q6WN34 429 aa16.21■□□□□ 0.19
HELLS-209ENST00000464030 SLC4A1APQ9BWU0 796 aaKnown RBP16.01■□□□□ 0.15
HELLS-209ENST00000464030 ZBTB12Q9Y330 459 aaPredicted RBP15.99■□□□□ 0.15
HELLS-209ENST00000464030 FOXD4L1Q9NU39 408 aa15.98■□□□□ 0.15
HELLS-209ENST00000464030 AKT1S1Q96B36 256 aa15.97■□□□□ 0.15
HELLS-209ENST00000464030 ATF5Q9Y2D1 282 aaPredicted RBP15.96■□□□□ 0.15
HELLS-209ENST00000464030 REM2Q8IYK8 340 aaPredicted RBP15.82■□□□□ 0.12
HELLS-209ENST00000464030 OSCARQ8IYS5 282 aa15.81■□□□□ 0.12
HELLS-209ENST00000464030 SP7Q8TDD2 431 aaPredicted RBP15.78■□□□□ 0.12
HELLS-209ENST00000464030 PIP4P2Q8N4L2 257 aa15.73■□□□□ 0.11
HELLS-209ENST00000464030 HAX1O00165 279 aa15.64■□□□□ 0.09
HELLS-209ENST00000464030 PITPNM1O00562 1244 aa15.64■□□□□ 0.09
HELLS-209ENST00000464030 FXR2P51116 673 aaKnown RBP eCLIP15.55■□□□□ 0.08
HELLS-209ENST00000464030 ZBTB22O15209 634 aa15.54■□□□□ 0.08
HELLS-209ENST00000464030 ATXN8OSP0DMR3 200 aa15.51■□□□□ 0.07
HELLS-209ENST00000464030 FBLN2P98095 1184 aa15.48■□□□□ 0.07
HELLS-209ENST00000464030 SPDYE2BA6NHP3 402 aa15.43■□□□□ 0.06
HELLS-209ENST00000464030 SPDYE6P0CI01 402 aa15.43■□□□□ 0.06
HELLS-209ENST00000464030 SPDYE2Q495Y8 402 aa15.43■□□□□ 0.06
HELLS-209ENST00000464030 CLEC11AQ9Y240 323 aa15.34■□□□□ 0.05
HELLS-209ENST00000464030 EVX2Q03828 476 aa15.29■□□□□ 0.04
HELLS-209ENST00000464030 SPDYE1Q8NFV5 336 aaPredicted RBP15.29■□□□□ 0.04
HELLS-209ENST00000464030 PRKAR2AP13861 404 aaKnown RBP15.28■□□□□ 0.04
HELLS-209ENST00000464030 ZNF692Q9BU19 519 aaPredicted RBP15.25■□□□□ 0.03
HELLS-209ENST00000464030 MKRN4PQ13434 485 aaPredicted RBP15.19■□□□□ 0.02
HELLS-209ENST00000464030 SSUH2Q9Y2M2 353 aa15.13■□□□□ 0.01
HELLS-209ENST00000464030 C19orf67A6NJJ6 358 aa15.07■□□□□ 0
HELLS-209ENST00000464030 PRR29P0C7W0 189 aa15.02■□□□□ -0
HELLS-209ENST00000464030 CHADLQ6NUI6 762 aa15.02■□□□□ -0
HELLS-209ENST00000464030 PABPN1Q86U42 306 aaKnown RBP eCLIP14.99□□□□□ -0.01
HELLS-209ENST00000464030 GABBR2O75899 941 aa14.98□□□□□ -0.01
HELLS-209ENST00000464030 LHX8Q68G74 356 aa14.83□□□□□ -0.04
HELLS-209ENST00000464030 CD44P16070 742 aaKnown RBP14.77□□□□□ -0.05
HELLS-209ENST00000464030 FARP1Q9Y4F1 1045 aaPredicted RBP14.75□□□□□ -0.05
HELLS-209ENST00000464030 CSRNP3Q8WYN3 585 aa14.66□□□□□ -0.06
HELLS-209ENST00000464030 CLCN6P51797 869 aa14.63□□□□□ -0.07
HELLS-209ENST00000464030 POTEIP0CG38 1075 aa14.59□□□□□ -0.07
HELLS-209ENST00000464030 DCBLD2Q96PD2 775 aa14.58□□□□□ -0.08
HELLS-209ENST00000464030 EHMT2Q96KQ7 1210 aa14.54□□□□□ -0.08
HELLS-209ENST00000464030 ZRANB1Q9UGI0 708 aa14.53□□□□□ -0.08
HELLS-209ENST00000464030 STAG3Q9UJ98 1225 aa14.52□□□□□ -0.09
HELLS-209ENST00000464030 ZNF579Q8NAF0 562 aaKnown RBP14.46□□□□□ -0.09
HELLS-209ENST00000464030 CREBZFQ9NS37 354 aa14.46□□□□□ -0.09
HELLS-209ENST00000464030 SPDYE4A6NLX3 237 aa14.38□□□□□ -0.11
HELLS-209ENST00000464030 PAK3O75914 559 aaPredicted RBP14.38□□□□□ -0.11
HELLS-209ENST00000464030 GALR2O43603 387 aaPredicted RBP14.34□□□□□ -0.11
HELLS-209ENST00000464030 NPM1P06748 294 aaKnown RBP eCLIP14.28□□□□□ -0.12
HELLS-209ENST00000464030 PHF12Q96QT6 1004 aa14.25□□□□□ -0.13
HELLS-209ENST00000464030 PLSCR2Q9NRY7 297 aa14.25□□□□□ -0.13
HELLS-209ENST00000464030 OTUD5Q96G74 571 aa14.16□□□□□ -0.14
HELLS-209ENST00000464030 MNX1P50219 401 aaPredicted RBP14.12□□□□□ -0.15
HELLS-209ENST00000464030 POTEB2H3BUK9 544 aa14.11□□□□□ -0.15
HELLS-209ENST00000464030 PELP1Q8IZL8 1130 aaKnown RBP14.07□□□□□ -0.16
HELLS-209ENST00000464030 MS4A3Q96HJ5 214 aa14.04□□□□□ -0.16
HELLS-209ENST00000464030 TSPYL2Q9H2G4 693 aaPredicted RBP14.01□□□□□ -0.17
HELLS-209ENST00000464030 METRNQ9UJH8 293 aa14.01□□□□□ -0.17
HELLS-209ENST00000464030 ASTLQ6HA08 431 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms