RNA–Protein interactions for RNA: ENST00000463997.1

CAPN2-204, Transcript of calpain 2, humanhuman

TSL 2

Gene CAPN2, Length 2,547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-204ENST00000463997 AEBP2Q6ZN18 517 aaPredicted RBP13.89□□□□□ -0.19
CAPN2-204ENST00000463997 CHIC1Q5VXU3 224 aa13.58□□□□□ -0.23
CAPN2-204ENST00000463997 PHF23Q9BUL5 403 aaPredicted RBP11.99□□□□□ -0.49
CAPN2-204ENST00000463997 SENP3Q9H4L4 574 aaPredicted RBP11.71□□□□□ -0.53
CAPN2-204ENST00000463997 PLPPR3Q6T4P5 718 aa11.05□□□□□ -0.64
CAPN2-204ENST00000463997 FOXD1Q16676 465 aa10.9□□□□□ -0.66
CAPN2-204ENST00000463997 PPP6R1Q9UPN7 881 aa10.58□□□□□ -0.72
CAPN2-204ENST00000463997 ADRA2BP18089 450 aa10.55□□□□□ -0.72
CAPN2-204ENST00000463997 PIAS4Q8N2W9 510 aaPredicted RBP10.3□□□□□ -0.76
CAPN2-204ENST00000463997 MSH5O43196 834 aa9.97□□□□□ -0.81
CAPN2-204ENST00000463997 POTEDQ86YR6 584 aa9.83□□□□□ -0.84
CAPN2-204ENST00000463997 PPP4R3CPQ6ZMV5 832 aa9.76□□□□□ -0.85
CAPN2-204ENST00000463997 KCNA4P22459 653 aa9.64□□□□□ -0.87
CAPN2-204ENST00000463997 SCAF1Q9H7N4 1312 aaKnown RBP9.58□□□□□ -0.88
CAPN2-204ENST00000463997 MAPK8IP2Q13387 824 aaPredicted RBP9.56□□□□□ -0.88
CAPN2-204ENST00000463997 NCBP3Q53F19 620 aaKnown RBP9.48□□□□□ -0.89
CAPN2-204ENST00000463997 CNKSR2Q8WXI2 1034 aa9.45□□□□□ -0.9
CAPN2-204ENST00000463997 NPM3O75607 178 aaKnown RBP9.4□□□□□ -0.91
CAPN2-204ENST00000463997 DMRT2Q9Y5R5 561 aa9.36□□□□□ -0.91
CAPN2-204ENST00000463997 RNF216Q9NWF9 866 aaPredicted RBP9.25□□□□□ -0.93
CAPN2-204ENST00000463997 HOXD11P31277 338 aaPredicted RBP9.2□□□□□ -0.94
CAPN2-204ENST00000463997 SLC4A1APQ9BWU0 796 aaKnown RBP9.16□□□□□ -0.94
CAPN2-204ENST00000463997 DNAJC5BQ9UF47 199 aa9.06□□□□□ -0.96
CAPN2-204ENST00000463997 EHMT2Q96KQ7 1210 aa9.03□□□□□ -0.96
CAPN2-204ENST00000463997 DCAF8L1A6NGE4 600 aa8.98□□□□□ -0.97
CAPN2-204ENST00000463997 ZBTB22O15209 634 aa8.89□□□□□ -0.99
CAPN2-204ENST00000463997 CSRNP3Q8WYN3 585 aa8.88□□□□□ -0.99
CAPN2-204ENST00000463997 SLC4A2P04920 1241 aa8.87□□□□□ -0.99
CAPN2-204ENST00000463997 FOXD4L1Q9NU39 408 aa8.82□□□□□ -1
CAPN2-204ENST00000463997 PELP1Q8IZL8 1130 aaKnown RBP8.78□□□□□ -1
CAPN2-204ENST00000463997 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.77□□□□□ -1.01
CAPN2-204ENST00000463997 U3KPZ7 1027 aaPredicted RBP8.66□□□□□ -1.02
CAPN2-204ENST00000463997 MYCNP04198 464 aaPredicted RBP8.65□□□□□ -1.02
CAPN2-204ENST00000463997 RNF39Q9H2S5 420 aa8.59□□□□□ -1.03
CAPN2-204ENST00000463997 MYT1Q01538 1121 aa8.57□□□□□ -1.04
CAPN2-204ENST00000463997 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.51□□□□□ -1.05
CAPN2-204ENST00000463997 HNRNPUL2Q1KMD3 747 aaKnown RBP8.51□□□□□ -1.05
CAPN2-204ENST00000463997 SAMD1Q6SPF0 538 aaPredicted RBP8.5□□□□□ -1.05
CAPN2-204ENST00000463997 ATF5Q9Y2D1 282 aaPredicted RBP8.47□□□□□ -1.05
CAPN2-204ENST00000463997 ATXN8OSP0DMR3 200 aa8.47□□□□□ -1.05
CAPN2-204ENST00000463997 C1QBPQ07021 282 aaKnown RBP8.46□□□□□ -1.05
CAPN2-204ENST00000463997 SPINK5Q9NQ38 1064 aaPredicted RBP8.42□□□□□ -1.06
CAPN2-204ENST00000463997 APLP2Q06481 763 aa8.38□□□□□ -1.07
CAPN2-204ENST00000463997 CAPN15O75808 1086 aa8.35□□□□□ -1.07
CAPN2-204ENST00000463997 TRHP20396 242 aaPredicted RBP8.34□□□□□ -1.07
CAPN2-204ENST00000463997 HRCP23327 699 aa8.34□□□□□ -1.07
CAPN2-204ENST00000463997 CACNB1Q02641 598 aaPredicted RBP8.31□□□□□ -1.08
CAPN2-204ENST00000463997 ZNF219Q9P2Y4 722 aaPredicted RBP8.31□□□□□ -1.08
CAPN2-204ENST00000463997 ABCB7O75027 752 aa8.23□□□□□ -1.09
CAPN2-204ENST00000463997 POLA2Q14181 598 aa8.22□□□□□ -1.09
CAPN2-204ENST00000463997 DSG3P32926 999 aa8.2□□□□□ -1.1
CAPN2-204ENST00000463997 TTBK1Q5TCY1 1321 aaPredicted RBP8.2□□□□□ -1.1
CAPN2-204ENST00000463997 PPARGC1BQ86YN6 1023 aaKnown RBP8.16□□□□□ -1.1
CAPN2-204ENST00000463997 MKRN4PQ13434 485 aaPredicted RBP8.09□□□□□ -1.11
CAPN2-204ENST00000463997 PRKCSHP14314 528 aaPredicted RBP8.07□□□□□ -1.12
CAPN2-204ENST00000463997 FBLN2P98095 1184 aa8.04□□□□□ -1.12
CAPN2-204ENST00000463997 ZBTB12Q9Y330 459 aaPredicted RBP8.02□□□□□ -1.12
CAPN2-204ENST00000463997 FKBP8Q14318 412 aa8.01□□□□□ -1.13
CAPN2-204ENST00000463997 BCL11AQ9H165 835 aa7.98□□□□□ -1.13
CAPN2-204ENST00000463997 OSCARQ8IYS5 282 aa7.95□□□□□ -1.14
CAPN2-204ENST00000463997 PCGF6Q9BYE7 350 aa7.93□□□□□ -1.14
CAPN2-204ENST00000463997 SPDYE4A6NLX3 237 aa7.92□□□□□ -1.14
CAPN2-204ENST00000463997 FAM9AQ8IZU1 332 aaPredicted RBP7.91□□□□□ -1.14
CAPN2-204ENST00000463997 SPDYE2BA6NHP3 402 aa7.85□□□□□ -1.15
CAPN2-204ENST00000463997 SPDYE6P0CI01 402 aa7.85□□□□□ -1.15
CAPN2-204ENST00000463997 SPDYE2Q495Y8 402 aa7.85□□□□□ -1.15
CAPN2-204ENST00000463997 ERICH6Q7L0X2 663 aa7.84□□□□□ -1.15
CAPN2-204ENST00000463997 ZNF692Q9BU19 519 aaPredicted RBP7.84□□□□□ -1.15
CAPN2-204ENST00000463997 ACIN1Q9UKV3 1341 aaKnown RBP7.81□□□□□ -1.16
CAPN2-204ENST00000463997 SSUH2Q9Y2M2 353 aa7.81□□□□□ -1.16
CAPN2-204ENST00000463997 CENPBP07199 599 aaPredicted RBP7.8□□□□□ -1.16
CAPN2-204ENST00000463997 PROM2Q8N271 834 aa7.8□□□□□ -1.16
CAPN2-204ENST00000463997 GTF3C3Q9Y5Q9 886 aa7.78□□□□□ -1.16
CAPN2-204ENST00000463997 RBM42Q9BTD8 480 aaKnown RBP7.77□□□□□ -1.17
CAPN2-204ENST00000463997 NEUROD1Q13562 356 aa7.77□□□□□ -1.17
CAPN2-204ENST00000463997 PABPN1Q86U42 306 aaKnown RBP eCLIP7.75□□□□□ -1.17
CAPN2-204ENST00000463997 SLC24A1O60721 1099 aa7.72□□□□□ -1.17
CAPN2-204ENST00000463997 AKT1S1Q96B36 256 aa7.7□□□□□ -1.18
CAPN2-204ENST00000463997 MYO15BQ96JP2 1530 aa7.69□□□□□ -1.18
CAPN2-204ENST00000463997 ZEB1P37275 1124 aaPredicted RBP7.66□□□□□ -1.18
CAPN2-204ENST00000463997 FBXO3Q9UK99 471 aa7.66□□□□□ -1.18
CAPN2-204ENST00000463997 REM2Q8IYK8 340 aaPredicted RBP7.65□□□□□ -1.18
CAPN2-204ENST00000463997 ANP32EQ9BTT0 268 aa7.64□□□□□ -1.19
CAPN2-204ENST00000463997 NISCHQ9Y2I1 1504 aa7.59□□□□□ -1.19
CAPN2-204ENST00000463997 CLEC11AQ9Y240 323 aa7.59□□□□□ -1.19
CAPN2-204ENST00000463997 VASPP50552 380 aaPredicted RBP7.59□□□□□ -1.19
CAPN2-204ENST00000463997 SPDYE1Q8NFV5 336 aaPredicted RBP7.59□□□□□ -1.19
CAPN2-204ENST00000463997 STAG3Q9UJ98 1225 aa7.58□□□□□ -1.2
CAPN2-204ENST00000463997 PITPNM1O00562 1244 aa7.57□□□□□ -1.2
CAPN2-204ENST00000463997 TRIM26Q12899 539 aaPredicted RBP7.53□□□□□ -1.2
CAPN2-204ENST00000463997 DCAF1Q9Y4B6 1507 aa7.53□□□□□ -1.2
CAPN2-204ENST00000463997 CCDC180Q9P1Z9 1646 aa7.52□□□□□ -1.21
CAPN2-204ENST00000463997 PRR29P0C7W0 189 aa7.51□□□□□ -1.21
CAPN2-204ENST00000463997 IFNLR1Q8IU57 520 aaPredicted RBP7.51□□□□□ -1.21
CAPN2-204ENST00000463997 MIER1Q8N108 512 aa7.5□□□□□ -1.21
CAPN2-204ENST00000463997 PLCD3Q8N3E9 789 aa7.5□□□□□ -1.21
CAPN2-204ENST00000463997 CHRDL2Q6WN34 429 aa7.46□□□□□ -1.22
CAPN2-204ENST00000463997 CREBZFQ9NS37 354 aa7.44□□□□□ -1.22
CAPN2-204ENST00000463997 ANO8Q9HCE9 1232 aaPredicted RBP7.43□□□□□ -1.22
CAPN2-204ENST00000463997 KLHL34Q8N239 644 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms