RNA–Protein interactions for RNA: ENST00000463697.1

CNOT10-209, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 3

Gene CNOT10, Length 719 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-209ENST00000463697 AEBP2Q6ZN18 517 aaPredicted RBP29.23■■■□□ 2.27
CNOT10-209ENST00000463697 CHIC1Q5VXU3 224 aa28.53■■■□□ 2.16
CNOT10-209ENST00000463697 PHF23Q9BUL5 403 aaPredicted RBP25.26■■□□□ 1.63
CNOT10-209ENST00000463697 SENP3Q9H4L4 574 aaPredicted RBP24.52■■□□□ 1.52
CNOT10-209ENST00000463697 PLPPR3Q6T4P5 718 aa23.13■■□□□ 1.29
CNOT10-209ENST00000463697 FOXD1Q16676 465 aa22.91■■□□□ 1.26
CNOT10-209ENST00000463697 PPP6R1Q9UPN7 881 aa22.27■■□□□ 1.16
CNOT10-209ENST00000463697 ADRA2BP18089 450 aa22.2■■□□□ 1.14
CNOT10-209ENST00000463697 PIAS4Q8N2W9 510 aaPredicted RBP21.54■■□□□ 1.04
CNOT10-209ENST00000463697 MSH5O43196 834 aa20.86■□□□□ 0.93
CNOT10-209ENST00000463697 PPP4R3CPQ6ZMV5 832 aa20.49■□□□□ 0.87
CNOT10-209ENST00000463697 KCNA4P22459 653 aa20.27■□□□□ 0.84
CNOT10-209ENST00000463697 MAPK8IP2Q13387 824 aaPredicted RBP20.16■□□□□ 0.82
CNOT10-209ENST00000463697 SCAF1Q9H7N4 1312 aaKnown RBP20.02■□□□□ 0.8
CNOT10-209ENST00000463697 NCBP3Q53F19 620 aaKnown RBP19.83■□□□□ 0.77
CNOT10-209ENST00000463697 CNKSR2Q8WXI2 1034 aa19.81■□□□□ 0.76
CNOT10-209ENST00000463697 NPM3O75607 178 aaKnown RBP19.74■□□□□ 0.75
CNOT10-209ENST00000463697 DMRT2Q9Y5R5 561 aa19.67■□□□□ 0.74
CNOT10-209ENST00000463697 RNF216Q9NWF9 866 aaPredicted RBP19.39■□□□□ 0.69
CNOT10-209ENST00000463697 HOXD11P31277 338 aaPredicted RBP19.33■□□□□ 0.68
CNOT10-209ENST00000463697 SLC4A1APQ9BWU0 796 aaKnown RBP19.21■□□□□ 0.67
CNOT10-209ENST00000463697 DNAJC5BQ9UF47 199 aa19.03■□□□□ 0.64
CNOT10-209ENST00000463697 POTEDQ86YR6 584 aa18.93■□□□□ 0.62
CNOT10-209ENST00000463697 EHMT2Q96KQ7 1210 aa18.9■□□□□ 0.62
CNOT10-209ENST00000463697 DCAF8L1A6NGE4 600 aa18.78■□□□□ 0.6
CNOT10-209ENST00000463697 ZBTB22O15209 634 aa18.73■□□□□ 0.59
CNOT10-209ENST00000463697 SLC4A2P04920 1241 aa18.68■□□□□ 0.58
CNOT10-209ENST00000463697 CSRNP3Q8WYN3 585 aa18.68■□□□□ 0.58
CNOT10-209ENST00000463697 FOXD4L1Q9NU39 408 aa18.48■□□□□ 0.55
CNOT10-209ENST00000463697 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.36■□□□□ 0.53
CNOT10-209ENST00000463697 U3KPZ7 1027 aaPredicted RBP18.19■□□□□ 0.5
CNOT10-209ENST00000463697 MYCNP04198 464 aaPredicted RBP18.11■□□□□ 0.49
CNOT10-209ENST00000463697 RNF39Q9H2S5 420 aa18.02■□□□□ 0.48
CNOT10-209ENST00000463697 ATF5Q9Y2D1 282 aaPredicted RBP17.86■□□□□ 0.45
CNOT10-209ENST00000463697 ATXN8OSP0DMR3 200 aa17.76■□□□□ 0.43
CNOT10-209ENST00000463697 SAMD1Q6SPF0 538 aaPredicted RBP17.76■□□□□ 0.43
CNOT10-209ENST00000463697 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.75■□□□□ 0.43
CNOT10-209ENST00000463697 HNRNPUL2Q1KMD3 747 aaKnown RBP17.75■□□□□ 0.43
CNOT10-209ENST00000463697 C1QBPQ07021 282 aaKnown RBP17.71■□□□□ 0.43
CNOT10-209ENST00000463697 SPINK5Q9NQ38 1064 aaPredicted RBP17.69■□□□□ 0.42
CNOT10-209ENST00000463697 CAPN15O75808 1086 aa17.47■□□□□ 0.39
CNOT10-209ENST00000463697 TRHP20396 242 aaPredicted RBP17.46■□□□□ 0.39
CNOT10-209ENST00000463697 APLP2Q06481 763 aa17.46■□□□□ 0.39
CNOT10-209ENST00000463697 ZNF219Q9P2Y4 722 aaPredicted RBP17.41■□□□□ 0.38
CNOT10-209ENST00000463697 CACNB1Q02641 598 aaPredicted RBP17.39■□□□□ 0.37
CNOT10-209ENST00000463697 ABCB7O75027 752 aa17.24■□□□□ 0.35
CNOT10-209ENST00000463697 POLA2Q14181 598 aa17.23■□□□□ 0.35
CNOT10-209ENST00000463697 DSG3P32926 999 aa17.22■□□□□ 0.35
CNOT10-209ENST00000463697 MKRN4PQ13434 485 aaPredicted RBP17.05■□□□□ 0.32
CNOT10-209ENST00000463697 FBLN2P98095 1184 aa16.8■□□□□ 0.28
CNOT10-209ENST00000463697 FKBP8Q14318 412 aa16.79■□□□□ 0.28
CNOT10-209ENST00000463697 ZBTB12Q9Y330 459 aaPredicted RBP16.74■□□□□ 0.27
CNOT10-209ENST00000463697 OSCARQ8IYS5 282 aa16.65■□□□□ 0.26
CNOT10-209ENST00000463697 SPDYE4A6NLX3 237 aa16.59■□□□□ 0.25
CNOT10-209ENST00000463697 ZNF692Q9BU19 519 aaPredicted RBP16.42■□□□□ 0.22
CNOT10-209ENST00000463697 SPDYE2BA6NHP3 402 aa16.4■□□□□ 0.22
CNOT10-209ENST00000463697 SPDYE6P0CI01 402 aa16.4■□□□□ 0.22
CNOT10-209ENST00000463697 SPDYE2Q495Y8 402 aa16.4■□□□□ 0.22
CNOT10-209ENST00000463697 PROM2Q8N271 834 aa16.39■□□□□ 0.21
CNOT10-209ENST00000463697 SSUH2Q9Y2M2 353 aa16.38■□□□□ 0.21
CNOT10-209ENST00000463697 PABPN1Q86U42 306 aaKnown RBP eCLIP16.23■□□□□ 0.19
CNOT10-209ENST00000463697 RBM42Q9BTD8 480 aaKnown RBP16.19■□□□□ 0.18
CNOT10-209ENST00000463697 AKT1S1Q96B36 256 aa16.12■□□□□ 0.17
CNOT10-209ENST00000463697 REM2Q8IYK8 340 aaPredicted RBP16.06■□□□□ 0.16
CNOT10-209ENST00000463697 FBXO3Q9UK99 471 aa15.98■□□□□ 0.15
CNOT10-209ENST00000463697 VASPP50552 380 aaPredicted RBP15.89■□□□□ 0.13
CNOT10-209ENST00000463697 PITPNM1O00562 1244 aa15.88■□□□□ 0.13
CNOT10-209ENST00000463697 SPDYE1Q8NFV5 336 aaPredicted RBP15.87■□□□□ 0.13
CNOT10-209ENST00000463697 CLEC11AQ9Y240 323 aa15.86■□□□□ 0.13
CNOT10-209ENST00000463697 STAG3Q9UJ98 1225 aa15.84■□□□□ 0.13
CNOT10-209ENST00000463697 IFNLR1Q8IU57 520 aaPredicted RBP15.79■□□□□ 0.12
CNOT10-209ENST00000463697 PRR29P0C7W0 189 aa15.71■□□□□ 0.11
CNOT10-209ENST00000463697 MIER1Q8N108 512 aa15.7■□□□□ 0.1
CNOT10-209ENST00000463697 CREBZFQ9NS37 354 aa15.66■□□□□ 0.1
CNOT10-209ENST00000463697 PLCD3Q8N3E9 789 aa15.65■□□□□ 0.1
CNOT10-209ENST00000463697 CHRDL2Q6WN34 429 aa15.6■□□□□ 0.09
CNOT10-209ENST00000463697 RTN4Q9NQC3 1192 aaKnown RBP15.6■□□□□ 0.09
CNOT10-209ENST00000463697 CHADLQ6NUI6 762 aa15.57■□□□□ 0.08
CNOT10-209ENST00000463697 MNX1P50219 401 aaPredicted RBP15.56■□□□□ 0.08
CNOT10-209ENST00000463697 FXR2P51116 673 aaKnown RBP eCLIP15.55■□□□□ 0.08
CNOT10-209ENST00000463697 KLHL34Q8N239 644 aa15.54■□□□□ 0.08
CNOT10-209ENST00000463697 PIP4P2Q8N4L2 257 aa15.49■□□□□ 0.07
CNOT10-209ENST00000463697 PRKAR2AP13861 404 aaKnown RBP15.45■□□□□ 0.06
CNOT10-209ENST00000463697 SPOCK2Q92563 424 aa15.45■□□□□ 0.06
CNOT10-209ENST00000463697 AMER1Q5JTC6 1135 aaPredicted RBP15.42■□□□□ 0.06
CNOT10-209ENST00000463697 PLEKHG5O94827 1062 aa15.41■□□□□ 0.06
CNOT10-209ENST00000463697 NUBP1P53384 320 aa15.38■□□□□ 0.05
CNOT10-209ENST00000463697 FARP1Q9Y4F1 1045 aaPredicted RBP15.35■□□□□ 0.05
CNOT10-209ENST00000463697 ZBTB47Q9UFB7 747 aaPredicted RBP15.34■□□□□ 0.05
CNOT10-209ENST00000463697 PKD2Q13563 968 aa15.33■□□□□ 0.04
CNOT10-209ENST00000463697 RASEFQ8IZ41 740 aa15.29■□□□□ 0.04
CNOT10-209ENST00000463697 NPM1P06748 294 aaKnown RBP eCLIP15.21■□□□□ 0.03
CNOT10-209ENST00000463697 CIZ1Q9ULV3 898 aaPredicted RBP15.2■□□□□ 0.02
CNOT10-209ENST00000463697 DCAF8Q5TAQ9 597 aa15.16■□□□□ 0.02
CNOT10-209ENST00000463697 TSPYL2Q9H2G4 693 aaPredicted RBP15.11■□□□□ 0.01
CNOT10-209ENST00000463697 ECM2O94769 699 aaPredicted RBP15.08■□□□□ 0
CNOT10-209ENST00000463697 GSE1Q14687 1217 aa15.08■□□□□ 0
CNOT10-209ENST00000463697 FAM212AQ96EL1 285 aa15.08■□□□□ 0
CNOT10-209ENST00000463697 RGL2O15211 777 aa15.04■□□□□ -0
CNOT10-209ENST00000463697 C19orf67A6NJJ6 358 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms