RNA–Protein interactions for RNA: ENST00000463594.1

CCDC172-202, Transcript of coiled-coil domain containing 172, humanhuman

TSL 2

Gene CCDC172, Length 313 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-202ENST00000463594 AEBP2Q6ZN18 517 aaPredicted RBP33.52■■■□□ 2.96
CCDC172-202ENST00000463594 CHIC1Q5VXU3 224 aa32.06■■■□□ 2.72
CCDC172-202ENST00000463594 SENP3Q9H4L4 574 aaPredicted RBP28.38■■■□□ 2.13
CCDC172-202ENST00000463594 PHF23Q9BUL5 403 aaPredicted RBP28.21■■■□□ 2.11
CCDC172-202ENST00000463594 FOXD1Q16676 465 aa26.51■■□□□ 1.83
CCDC172-202ENST00000463594 PLPPR3Q6T4P5 718 aa25.7■■□□□ 1.7
CCDC172-202ENST00000463594 PPP6R1Q9UPN7 881 aa25.1■■□□□ 1.61
CCDC172-202ENST00000463594 ADRA2BP18089 450 aa25.01■■□□□ 1.59
CCDC172-202ENST00000463594 PIAS4Q8N2W9 510 aaPredicted RBP24.81■■□□□ 1.56
CCDC172-202ENST00000463594 MSH5O43196 834 aa24.56■■□□□ 1.52
CCDC172-202ENST00000463594 POTEDQ86YR6 584 aa23.52■■□□□ 1.36
CCDC172-202ENST00000463594 MAPK8IP2Q13387 824 aaPredicted RBP22.89■■□□□ 1.25
CCDC172-202ENST00000463594 SCAF1Q9H7N4 1312 aaKnown RBP22.69■■□□□ 1.22
CCDC172-202ENST00000463594 PPP4R3CPQ6ZMV5 832 aa22.62■■□□□ 1.21
CCDC172-202ENST00000463594 DMRT2Q9Y5R5 561 aa22.61■■□□□ 1.21
CCDC172-202ENST00000463594 CNKSR2Q8WXI2 1034 aa22.07■■□□□ 1.12
CCDC172-202ENST00000463594 HOXD11P31277 338 aaPredicted RBP21.9■■□□□ 1.1
CCDC172-202ENST00000463594 RNF216Q9NWF9 866 aaPredicted RBP21.8■■□□□ 1.08
CCDC172-202ENST00000463594 NCBP3Q53F19 620 aaKnown RBP21.75■■□□□ 1.07
CCDC172-202ENST00000463594 DCAF8L1A6NGE4 600 aa21.63■■□□□ 1.05
CCDC172-202ENST00000463594 NPM3O75607 178 aaKnown RBP21.58■■□□□ 1.05
CCDC172-202ENST00000463594 KCNA4P22459 653 aa21.49■■□□□ 1.03
CCDC172-202ENST00000463594 RNF39Q9H2S5 420 aa21.06■□□□□ 0.96
CCDC172-202ENST00000463594 DNAJC5BQ9UF47 199 aa20.99■□□□□ 0.95
CCDC172-202ENST00000463594 CACNB1Q02641 598 aaPredicted RBP20.9■□□□□ 0.94
CCDC172-202ENST00000463594 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.83■□□□□ 0.93
CCDC172-202ENST00000463594 C1QBPQ07021 282 aaKnown RBP20.7■□□□□ 0.9
CCDC172-202ENST00000463594 SLC4A2P04920 1241 aa20.55■□□□□ 0.88
CCDC172-202ENST00000463594 U3KPZ7 1027 aaPredicted RBP20.52■□□□□ 0.88
CCDC172-202ENST00000463594 SLC4A1APQ9BWU0 796 aaKnown RBP20.28■□□□□ 0.84
CCDC172-202ENST00000463594 SPINK5Q9NQ38 1064 aaPredicted RBP20.14■□□□□ 0.81
CCDC172-202ENST00000463594 CAPN15O75808 1086 aa20■□□□□ 0.79
CCDC172-202ENST00000463594 MYCNP04198 464 aaPredicted RBP19.88■□□□□ 0.77
CCDC172-202ENST00000463594 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.87■□□□□ 0.77
CCDC172-202ENST00000463594 HNRNPUL2Q1KMD3 747 aaKnown RBP19.87■□□□□ 0.77
CCDC172-202ENST00000463594 FOXD4L1Q9NU39 408 aa19.87■□□□□ 0.77
CCDC172-202ENST00000463594 DSG3P32926 999 aa19.85■□□□□ 0.77
CCDC172-202ENST00000463594 ZBTB22O15209 634 aa19.83■□□□□ 0.77
CCDC172-202ENST00000463594 SAMD1Q6SPF0 538 aaPredicted RBP19.82■□□□□ 0.76
CCDC172-202ENST00000463594 TRHP20396 242 aaPredicted RBP19.78■□□□□ 0.76
CCDC172-202ENST00000463594 APLP2Q06481 763 aa19.77■□□□□ 0.76
CCDC172-202ENST00000463594 ZNF219Q9P2Y4 722 aaPredicted RBP19.69■□□□□ 0.74
CCDC172-202ENST00000463594 ABCB7O75027 752 aa19.64■□□□□ 0.73
CCDC172-202ENST00000463594 ATF5Q9Y2D1 282 aaPredicted RBP19.53■□□□□ 0.72
CCDC172-202ENST00000463594 POLA2Q14181 598 aa19.32■□□□□ 0.68
CCDC172-202ENST00000463594 ATXN8OSP0DMR3 200 aa19.17■□□□□ 0.66
CCDC172-202ENST00000463594 CSRNP3Q8WYN3 585 aa19.15■□□□□ 0.66
CCDC172-202ENST00000463594 EHMT2Q96KQ7 1210 aa19.08■□□□□ 0.64
CCDC172-202ENST00000463594 ZBTB12Q9Y330 459 aaPredicted RBP18.86■□□□□ 0.61
CCDC172-202ENST00000463594 RBM42Q9BTD8 480 aaKnown RBP18.81■□□□□ 0.6
CCDC172-202ENST00000463594 OSCARQ8IYS5 282 aa18.75■□□□□ 0.59
CCDC172-202ENST00000463594 MKRN4PQ13434 485 aaPredicted RBP18.63■□□□□ 0.57
CCDC172-202ENST00000463594 FBLN2P98095 1184 aa18.56■□□□□ 0.56
CCDC172-202ENST00000463594 AKT1S1Q96B36 256 aa18.49■□□□□ 0.55
CCDC172-202ENST00000463594 POTEHQ6S545 545 aa18.46■□□□□ 0.55
CCDC172-202ENST00000463594 REM2Q8IYK8 340 aaPredicted RBP18.38■□□□□ 0.53
CCDC172-202ENST00000463594 SPDYE2BA6NHP3 402 aa18.35■□□□□ 0.53
CCDC172-202ENST00000463594 SPDYE6P0CI01 402 aa18.35■□□□□ 0.53
CCDC172-202ENST00000463594 SPDYE2Q495Y8 402 aa18.35■□□□□ 0.53
CCDC172-202ENST00000463594 CHRDL2Q6WN34 429 aa18.35■□□□□ 0.53
CCDC172-202ENST00000463594 PITPNM1O00562 1244 aa18.21■□□□□ 0.51
CCDC172-202ENST00000463594 SSUH2Q9Y2M2 353 aa18.21■□□□□ 0.51
CCDC172-202ENST00000463594 ZNF692Q9BU19 519 aaPredicted RBP18.2■□□□□ 0.5
CCDC172-202ENST00000463594 PIP4P2Q8N4L2 257 aa18.03■□□□□ 0.48
CCDC172-202ENST00000463594 PABPN1Q86U42 306 aaKnown RBP eCLIP17.98■□□□□ 0.47
CCDC172-202ENST00000463594 FXR2P51116 673 aaKnown RBP eCLIP17.95■□□□□ 0.46
CCDC172-202ENST00000463594 SPDYE1Q8NFV5 336 aaPredicted RBP17.94■□□□□ 0.46
CCDC172-202ENST00000463594 CLEC11AQ9Y240 323 aa17.93■□□□□ 0.46
CCDC172-202ENST00000463594 SPDYE4A6NLX3 237 aa17.83■□□□□ 0.44
CCDC172-202ENST00000463594 PRKAR2AP13861 404 aaKnown RBP17.7■□□□□ 0.42
CCDC172-202ENST00000463594 PRR29P0C7W0 189 aa17.65■□□□□ 0.42
CCDC172-202ENST00000463594 CHADLQ6NUI6 762 aa17.63■□□□□ 0.41
CCDC172-202ENST00000463594 HAX1O00165 279 aa17.54■□□□□ 0.4
CCDC172-202ENST00000463594 EVX2Q03828 476 aa17.49■□□□□ 0.39
CCDC172-202ENST00000463594 PROM2Q8N271 834 aa17.49■□□□□ 0.39
CCDC172-202ENST00000463594 SP7Q8TDD2 431 aaPredicted RBP17.46■□□□□ 0.39
CCDC172-202ENST00000463594 STAG3Q9UJ98 1225 aa17.44■□□□□ 0.38
CCDC172-202ENST00000463594 CREBZFQ9NS37 354 aa17.39■□□□□ 0.37
CCDC172-202ENST00000463594 C19orf67A6NJJ6 358 aa17.37■□□□□ 0.37
CCDC172-202ENST00000463594 FARP1Q9Y4F1 1045 aaPredicted RBP17.34■□□□□ 0.37
CCDC172-202ENST00000463594 FKBP8Q14318 412 aa17.32■□□□□ 0.36
CCDC172-202ENST00000463594 MNX1P50219 401 aaPredicted RBP17.16■□□□□ 0.34
CCDC172-202ENST00000463594 CD44P16070 742 aaKnown RBP17.15■□□□□ 0.34
CCDC172-202ENST00000463594 GABBR2O75899 941 aa17.03■□□□□ 0.32
CCDC172-202ENST00000463594 ZRANB1Q9UGI0 708 aa16.97■□□□□ 0.31
CCDC172-202ENST00000463594 NPM1P06748 294 aaKnown RBP eCLIP16.93■□□□□ 0.3
CCDC172-202ENST00000463594 MIER1Q8N108 512 aa16.93■□□□□ 0.3
CCDC172-202ENST00000463594 ZNF579Q8NAF0 562 aaKnown RBP16.91■□□□□ 0.3
CCDC172-202ENST00000463594 PLCD3Q8N3E9 789 aa16.83■□□□□ 0.28
CCDC172-202ENST00000463594 PHF12Q96QT6 1004 aa16.82■□□□□ 0.28
CCDC172-202ENST00000463594 PAK3O75914 559 aaPredicted RBP16.8■□□□□ 0.28
CCDC172-202ENST00000463594 PLEKHG5O94827 1062 aa16.78■□□□□ 0.28
CCDC172-202ENST00000463594 GALR2O43603 387 aaPredicted RBP16.74■□□□□ 0.27
CCDC172-202ENST00000463594 POTEIP0CG38 1075 aa16.74■□□□□ 0.27
CCDC172-202ENST00000463594 RASEFQ8IZ41 740 aa16.74■□□□□ 0.27
CCDC172-202ENST00000463594 TSPYL2Q9H2G4 693 aaPredicted RBP16.74■□□□□ 0.27
CCDC172-202ENST00000463594 FBXO3Q9UK99 471 aa16.73■□□□□ 0.27
CCDC172-202ENST00000463594 CLCN6P51797 869 aa16.71■□□□□ 0.27
CCDC172-202ENST00000463594 CCDC61Q9Y6R9 512 aa16.67■□□□□ 0.26
CCDC172-202ENST00000463594 NUBP1P53384 320 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms