RNA–Protein interactions for RNA: ENST00000463429.1

SAMD13-208, Transcript of sterile alpha motif domain containing 13, humanhuman

TSL 1 (best)

Gene SAMD13, Length 1,222 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD13-208ENST00000463429 AEBP2Q6ZN18 517 aaPredicted RBP29.45■■■□□ 2.31
SAMD13-208ENST00000463429 CHIC1Q5VXU3 224 aa28.51■■■□□ 2.15
SAMD13-208ENST00000463429 SENP3Q9H4L4 574 aaPredicted RBP25.16■■□□□ 1.62
SAMD13-208ENST00000463429 PHF23Q9BUL5 403 aaPredicted RBP24.95■■□□□ 1.58
SAMD13-208ENST00000463429 FOXD1Q16676 465 aa23.3■■□□□ 1.32
SAMD13-208ENST00000463429 PLPPR3Q6T4P5 718 aa23.03■■□□□ 1.28
SAMD13-208ENST00000463429 PPP6R1Q9UPN7 881 aa22.09■■□□□ 1.13
SAMD13-208ENST00000463429 ADRA2BP18089 450 aa22.05■■□□□ 1.12
SAMD13-208ENST00000463429 PIAS4Q8N2W9 510 aaPredicted RBP21.91■■□□□ 1.1
SAMD13-208ENST00000463429 MSH5O43196 834 aa21.73■■□□□ 1.07
SAMD13-208ENST00000463429 SCAF1Q9H7N4 1312 aaKnown RBP20.33■□□□□ 0.85
SAMD13-208ENST00000463429 POTEDQ86YR6 584 aa20.29■□□□□ 0.84
SAMD13-208ENST00000463429 PPP4R3CPQ6ZMV5 832 aa20.19■□□□□ 0.82
SAMD13-208ENST00000463429 MAPK8IP2Q13387 824 aaPredicted RBP20.07■□□□□ 0.8
SAMD13-208ENST00000463429 DMRT2Q9Y5R5 561 aa20.01■□□□□ 0.79
SAMD13-208ENST00000463429 CNKSR2Q8WXI2 1034 aa19.75■□□□□ 0.75
SAMD13-208ENST00000463429 NCBP3Q53F19 620 aaKnown RBP19.64■□□□□ 0.73
SAMD13-208ENST00000463429 HOXD11P31277 338 aaPredicted RBP19.48■□□□□ 0.71
SAMD13-208ENST00000463429 RNF216Q9NWF9 866 aaPredicted RBP19.46■□□□□ 0.71
SAMD13-208ENST00000463429 KCNA4P22459 653 aa19.29■□□□□ 0.68
SAMD13-208ENST00000463429 NPM3O75607 178 aaKnown RBP19.27■□□□□ 0.68
SAMD13-208ENST00000463429 DCAF8L1A6NGE4 600 aa19.05■□□□□ 0.64
SAMD13-208ENST00000463429 DNAJC5BQ9UF47 199 aa18.95■□□□□ 0.62
SAMD13-208ENST00000463429 RNF39Q9H2S5 420 aa18.55■□□□□ 0.56
SAMD13-208ENST00000463429 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.49■□□□□ 0.55
SAMD13-208ENST00000463429 SLC4A1APQ9BWU0 796 aaKnown RBP18.36■□□□□ 0.53
SAMD13-208ENST00000463429 C1QBPQ07021 282 aaKnown RBP18.34■□□□□ 0.53
SAMD13-208ENST00000463429 SLC4A2P04920 1241 aa18.27■□□□□ 0.52
SAMD13-208ENST00000463429 CACNB1Q02641 598 aaPredicted RBP18.26■□□□□ 0.51
SAMD13-208ENST00000463429 U3KPZ7 1027 aaPredicted RBP18.17■□□□□ 0.5
SAMD13-208ENST00000463429 FOXD4L1Q9NU39 408 aa17.94■□□□□ 0.46
SAMD13-208ENST00000463429 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.93■□□□□ 0.46
SAMD13-208ENST00000463429 HNRNPUL2Q1KMD3 747 aaKnown RBP17.93■□□□□ 0.46
SAMD13-208ENST00000463429 MYCNP04198 464 aaPredicted RBP17.89■□□□□ 0.45
SAMD13-208ENST00000463429 APLP2Q06481 763 aa17.86■□□□□ 0.45
SAMD13-208ENST00000463429 SAMD1Q6SPF0 538 aaPredicted RBP17.83■□□□□ 0.44
SAMD13-208ENST00000463429 ZBTB22O15209 634 aa17.73■□□□□ 0.43
SAMD13-208ENST00000463429 SPINK5Q9NQ38 1064 aaPredicted RBP17.71■□□□□ 0.43
SAMD13-208ENST00000463429 CAPN15O75808 1086 aa17.68■□□□□ 0.42
SAMD13-208ENST00000463429 ZNF219Q9P2Y4 722 aaPredicted RBP17.61■□□□□ 0.41
SAMD13-208ENST00000463429 DSG3P32926 999 aa17.5■□□□□ 0.39
SAMD13-208ENST00000463429 TRHP20396 242 aaPredicted RBP17.49■□□□□ 0.39
SAMD13-208ENST00000463429 ATXN8OSP0DMR3 200 aa17.41■□□□□ 0.38
SAMD13-208ENST00000463429 CSRNP3Q8WYN3 585 aa17.35■□□□□ 0.37
SAMD13-208ENST00000463429 EHMT2Q96KQ7 1210 aa17.35■□□□□ 0.37
SAMD13-208ENST00000463429 ATF5Q9Y2D1 282 aaPredicted RBP17.3■□□□□ 0.36
SAMD13-208ENST00000463429 ABCB7O75027 752 aa17.28■□□□□ 0.36
SAMD13-208ENST00000463429 POLA2Q14181 598 aa17.14■□□□□ 0.33
SAMD13-208ENST00000463429 ZBTB12Q9Y330 459 aaPredicted RBP17■□□□□ 0.31
SAMD13-208ENST00000463429 RBM42Q9BTD8 480 aaKnown RBP16.78■□□□□ 0.28
SAMD13-208ENST00000463429 FBLN2P98095 1184 aa16.72■□□□□ 0.27
SAMD13-208ENST00000463429 OSCARQ8IYS5 282 aa16.6■□□□□ 0.25
SAMD13-208ENST00000463429 MKRN4PQ13434 485 aaPredicted RBP16.57■□□□□ 0.24
SAMD13-208ENST00000463429 SPDYE2BA6NHP3 402 aa16.46■□□□□ 0.23
SAMD13-208ENST00000463429 SPDYE6P0CI01 402 aa16.46■□□□□ 0.23
SAMD13-208ENST00000463429 SPDYE2Q495Y8 402 aa16.46■□□□□ 0.23
SAMD13-208ENST00000463429 AKT1S1Q96B36 256 aa16.46■□□□□ 0.23
SAMD13-208ENST00000463429 SSUH2Q9Y2M2 353 aa16.29■□□□□ 0.2
SAMD13-208ENST00000463429 ZNF692Q9BU19 519 aaPredicted RBP16.26■□□□□ 0.19
SAMD13-208ENST00000463429 REM2Q8IYK8 340 aaPredicted RBP16.24■□□□□ 0.19
SAMD13-208ENST00000463429 CHRDL2Q6WN34 429 aa16.14■□□□□ 0.17
SAMD13-208ENST00000463429 PITPNM1O00562 1244 aa16.07■□□□□ 0.16
SAMD13-208ENST00000463429 SPDYE4A6NLX3 237 aa16.06■□□□□ 0.16
SAMD13-208ENST00000463429 SPDYE1Q8NFV5 336 aaPredicted RBP16.04■□□□□ 0.16
SAMD13-208ENST00000463429 PABPN1Q86U42 306 aaKnown RBP eCLIP16.03■□□□□ 0.16
SAMD13-208ENST00000463429 POTEHQ6S545 545 aa16.01■□□□□ 0.15
SAMD13-208ENST00000463429 CLEC11AQ9Y240 323 aa15.88■□□□□ 0.13
SAMD13-208ENST00000463429 FXR2P51116 673 aaKnown RBP eCLIP15.86■□□□□ 0.13
SAMD13-208ENST00000463429 PIP4P2Q8N4L2 257 aa15.84■□□□□ 0.13
SAMD13-208ENST00000463429 PROM2Q8N271 834 aa15.83■□□□□ 0.12
SAMD13-208ENST00000463429 STAG3Q9UJ98 1225 aa15.79■□□□□ 0.12
SAMD13-208ENST00000463429 PRR29P0C7W0 189 aa15.73■□□□□ 0.11
SAMD13-208ENST00000463429 FKBP8Q14318 412 aa15.71■□□□□ 0.11
SAMD13-208ENST00000463429 PRKAR2AP13861 404 aaKnown RBP15.64■□□□□ 0.09
SAMD13-208ENST00000463429 CHADLQ6NUI6 762 aa15.51■□□□□ 0.07
SAMD13-208ENST00000463429 CREBZFQ9NS37 354 aa15.46■□□□□ 0.07
SAMD13-208ENST00000463429 FARP1Q9Y4F1 1045 aaPredicted RBP15.41■□□□□ 0.06
SAMD13-208ENST00000463429 HAX1O00165 279 aa15.39■□□□□ 0.05
SAMD13-208ENST00000463429 FBXO3Q9UK99 471 aa15.36■□□□□ 0.05
SAMD13-208ENST00000463429 C19orf67A6NJJ6 358 aa15.34■□□□□ 0.05
SAMD13-208ENST00000463429 PLEKHG5O94827 1062 aa15.28■□□□□ 0.04
SAMD13-208ENST00000463429 MNX1P50219 401 aaPredicted RBP15.27■□□□□ 0.04
SAMD13-208ENST00000463429 NPM1P06748 294 aaKnown RBP eCLIP15.26■□□□□ 0.03
SAMD13-208ENST00000463429 SP7Q8TDD2 431 aaPredicted RBP15.26■□□□□ 0.03
SAMD13-208ENST00000463429 MIER1Q8N108 512 aa15.23■□□□□ 0.03
SAMD13-208ENST00000463429 PLCD3Q8N3E9 789 aa15.2■□□□□ 0.02
SAMD13-208ENST00000463429 CD44P16070 742 aaKnown RBP15.19■□□□□ 0.02
SAMD13-208ENST00000463429 EVX2Q03828 476 aa15.18■□□□□ 0.02
SAMD13-208ENST00000463429 ZBTB47Q9UFB7 747 aaPredicted RBP15.16■□□□□ 0.02
SAMD13-208ENST00000463429 VASPP50552 380 aaPredicted RBP15.11■□□□□ 0.01
SAMD13-208ENST00000463429 PAK3O75914 559 aaPredicted RBP15.09■□□□□ 0.01
SAMD13-208ENST00000463429 ZNF579Q8NAF0 562 aaKnown RBP15.05■□□□□ -0
SAMD13-208ENST00000463429 CLCN6P51797 869 aa15.04■□□□□ -0
SAMD13-208ENST00000463429 ZRANB1Q9UGI0 708 aa15.03■□□□□ -0
SAMD13-208ENST00000463429 GABBR2O75899 941 aa14.94□□□□□ -0.02
SAMD13-208ENST00000463429 NUBP1P53384 320 aa14.92□□□□□ -0.02
SAMD13-208ENST00000463429 RASEFQ8IZ41 740 aa14.91□□□□□ -0.02
SAMD13-208ENST00000463429 TSPYL2Q9H2G4 693 aaPredicted RBP14.88□□□□□ -0.03
SAMD13-208ENST00000463429 KLHL34Q8N239 644 aa14.87□□□□□ -0.03
SAMD13-208ENST00000463429 CCDC61Q9Y6R9 512 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms