RNA–Protein interactions for RNA: ENST00000463224.5

SFR1-203, Transcript of SWI5 dependent homologous recombination repair protein 1, humanhuman

TSL 3

Gene SFR1, Length 496 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1-203ENST00000463224 AEBP2Q6ZN18 517 aaPredicted RBP34.36■■■■□ 3.09
SFR1-203ENST00000463224 CHIC1Q5VXU3 224 aa32.97■■■□□ 2.87
SFR1-203ENST00000463224 SENP3Q9H4L4 574 aaPredicted RBP29.07■■■□□ 2.24
SFR1-203ENST00000463224 PHF23Q9BUL5 403 aaPredicted RBP29.03■■■□□ 2.24
SFR1-203ENST00000463224 FOXD1Q16676 465 aa27.15■■□□□ 1.94
SFR1-203ENST00000463224 PLPPR3Q6T4P5 718 aa26.48■■□□□ 1.83
SFR1-203ENST00000463224 PPP6R1Q9UPN7 881 aa25.8■■□□□ 1.72
SFR1-203ENST00000463224 ADRA2BP18089 450 aa25.71■■□□□ 1.71
SFR1-203ENST00000463224 PIAS4Q8N2W9 510 aaPredicted RBP25.42■■□□□ 1.66
SFR1-203ENST00000463224 MSH5O43196 834 aa25.1■■□□□ 1.61
SFR1-203ENST00000463224 POTEDQ86YR6 584 aa23.84■■□□□ 1.41
SFR1-203ENST00000463224 MAPK8IP2Q13387 824 aaPredicted RBP23.52■■□□□ 1.36
SFR1-203ENST00000463224 SCAF1Q9H7N4 1312 aaKnown RBP23.34■■□□□ 1.33
SFR1-203ENST00000463224 PPP4R3CPQ6ZMV5 832 aa23.34■■□□□ 1.33
SFR1-203ENST00000463224 DMRT2Q9Y5R5 561 aa23.17■■□□□ 1.3
SFR1-203ENST00000463224 CNKSR2Q8WXI2 1034 aa22.74■■□□□ 1.23
SFR1-203ENST00000463224 HOXD11P31277 338 aaPredicted RBP22.5■■□□□ 1.19
SFR1-203ENST00000463224 NCBP3Q53F19 620 aaKnown RBP22.47■■□□□ 1.19
SFR1-203ENST00000463224 RNF216Q9NWF9 866 aaPredicted RBP22.43■■□□□ 1.18
SFR1-203ENST00000463224 KCNA4P22459 653 aa22.29■■□□□ 1.16
SFR1-203ENST00000463224 NPM3O75607 178 aaKnown RBP22.27■■□□□ 1.16
SFR1-203ENST00000463224 DCAF8L1A6NGE4 600 aa22.18■■□□□ 1.14
SFR1-203ENST00000463224 DNAJC5BQ9UF47 199 aa21.63■■□□□ 1.05
SFR1-203ENST00000463224 RNF39Q9H2S5 420 aa21.54■■□□□ 1.04
SFR1-203ENST00000463224 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.41■■□□□ 1.02
SFR1-203ENST00000463224 CACNB1Q02641 598 aaPredicted RBP21.31■■□□□ 1
SFR1-203ENST00000463224 SLC4A2P04920 1241 aa21.2■□□□□ 0.98
SFR1-203ENST00000463224 C1QBPQ07021 282 aaKnown RBP21.19■□□□□ 0.98
SFR1-203ENST00000463224 U3KPZ7 1027 aaPredicted RBP21.08■□□□□ 0.97
SFR1-203ENST00000463224 SLC4A1APQ9BWU0 796 aaKnown RBP21.06■□□□□ 0.96
SFR1-203ENST00000463224 SPINK5Q9NQ38 1064 aaPredicted RBP20.67■□□□□ 0.9
SFR1-203ENST00000463224 ZBTB22O15209 634 aa20.56■□□□□ 0.88
SFR1-203ENST00000463224 FOXD4L1Q9NU39 408 aa20.56■□□□□ 0.88
SFR1-203ENST00000463224 CAPN15O75808 1086 aa20.52■□□□□ 0.88
SFR1-203ENST00000463224 MYCNP04198 464 aaPredicted RBP20.51■□□□□ 0.87
SFR1-203ENST00000463224 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.47■□□□□ 0.87
SFR1-203ENST00000463224 HNRNPUL2Q1KMD3 747 aaKnown RBP20.47■□□□□ 0.87
SFR1-203ENST00000463224 SAMD1Q6SPF0 538 aaPredicted RBP20.42■□□□□ 0.86
SFR1-203ENST00000463224 TRHP20396 242 aaPredicted RBP20.33■□□□□ 0.85
SFR1-203ENST00000463224 DSG3P32926 999 aa20.33■□□□□ 0.85
SFR1-203ENST00000463224 APLP2Q06481 763 aa20.33■□□□□ 0.85
SFR1-203ENST00000463224 ZNF219Q9P2Y4 722 aaPredicted RBP20.22■□□□□ 0.83
SFR1-203ENST00000463224 ABCB7O75027 752 aa20.16■□□□□ 0.82
SFR1-203ENST00000463224 ATF5Q9Y2D1 282 aaPredicted RBP20.16■□□□□ 0.82
SFR1-203ENST00000463224 CSRNP3Q8WYN3 585 aa19.98■□□□□ 0.79
SFR1-203ENST00000463224 EHMT2Q96KQ7 1210 aa19.95■□□□□ 0.78
SFR1-203ENST00000463224 POLA2Q14181 598 aa19.9■□□□□ 0.78
SFR1-203ENST00000463224 ATXN8OSP0DMR3 200 aa19.85■□□□□ 0.77
SFR1-203ENST00000463224 ZBTB12Q9Y330 459 aaPredicted RBP19.4■□□□□ 0.7
SFR1-203ENST00000463224 RBM42Q9BTD8 480 aaKnown RBP19.27■□□□□ 0.68
SFR1-203ENST00000463224 OSCARQ8IYS5 282 aa19.25■□□□□ 0.67
SFR1-203ENST00000463224 MKRN4PQ13434 485 aaPredicted RBP19.23■□□□□ 0.67
SFR1-203ENST00000463224 FBLN2P98095 1184 aa19.15■□□□□ 0.66
SFR1-203ENST00000463224 AKT1S1Q96B36 256 aa18.97■□□□□ 0.63
SFR1-203ENST00000463224 SPDYE2BA6NHP3 402 aa18.9■□□□□ 0.62
SFR1-203ENST00000463224 SPDYE6P0CI01 402 aa18.9■□□□□ 0.62
SFR1-203ENST00000463224 SPDYE2Q495Y8 402 aa18.9■□□□□ 0.62
SFR1-203ENST00000463224 REM2Q8IYK8 340 aaPredicted RBP18.86■□□□□ 0.61
SFR1-203ENST00000463224 ZNF692Q9BU19 519 aaPredicted RBP18.77■□□□□ 0.6
SFR1-203ENST00000463224 CHRDL2Q6WN34 429 aa18.76■□□□□ 0.59
SFR1-203ENST00000463224 SSUH2Q9Y2M2 353 aa18.75■□□□□ 0.59
SFR1-203ENST00000463224 POTEHQ6S545 545 aa18.74■□□□□ 0.59
SFR1-203ENST00000463224 PITPNM1O00562 1244 aa18.66■□□□□ 0.58
SFR1-203ENST00000463224 PABPN1Q86U42 306 aaKnown RBP eCLIP18.54■□□□□ 0.56
SFR1-203ENST00000463224 SPDYE4A6NLX3 237 aa18.47■□□□□ 0.55
SFR1-203ENST00000463224 SPDYE1Q8NFV5 336 aaPredicted RBP18.45■□□□□ 0.54
SFR1-203ENST00000463224 PIP4P2Q8N4L2 257 aa18.44■□□□□ 0.54
SFR1-203ENST00000463224 CLEC11AQ9Y240 323 aa18.43■□□□□ 0.54
SFR1-203ENST00000463224 FXR2P51116 673 aaKnown RBP eCLIP18.39■□□□□ 0.53
SFR1-203ENST00000463224 PRR29P0C7W0 189 aa18.17■□□□□ 0.5
SFR1-203ENST00000463224 PRKAR2AP13861 404 aaKnown RBP18.16■□□□□ 0.5
SFR1-203ENST00000463224 PROM2Q8N271 834 aa18.12■□□□□ 0.49
SFR1-203ENST00000463224 CHADLQ6NUI6 762 aa18.11■□□□□ 0.49
SFR1-203ENST00000463224 FKBP8Q14318 412 aa18.04■□□□□ 0.48
SFR1-203ENST00000463224 STAG3Q9UJ98 1225 aa18.02■□□□□ 0.48
SFR1-203ENST00000463224 HAX1O00165 279 aa17.94■□□□□ 0.46
SFR1-203ENST00000463224 CREBZFQ9NS37 354 aa17.91■□□□□ 0.46
SFR1-203ENST00000463224 EVX2Q03828 476 aa17.89■□□□□ 0.45
SFR1-203ENST00000463224 FARP1Q9Y4F1 1045 aaPredicted RBP17.83■□□□□ 0.44
SFR1-203ENST00000463224 C19orf67A6NJJ6 358 aa17.78■□□□□ 0.44
SFR1-203ENST00000463224 SP7Q8TDD2 431 aaPredicted RBP17.77■□□□□ 0.44
SFR1-203ENST00000463224 MNX1P50219 401 aaPredicted RBP17.68■□□□□ 0.42
SFR1-203ENST00000463224 CD44P16070 742 aaKnown RBP17.59■□□□□ 0.41
SFR1-203ENST00000463224 MIER1Q8N108 512 aa17.56■□□□□ 0.4
SFR1-203ENST00000463224 NPM1P06748 294 aaKnown RBP eCLIP17.46■□□□□ 0.39
SFR1-203ENST00000463224 PLCD3Q8N3E9 789 aa17.45■□□□□ 0.38
SFR1-203ENST00000463224 ZRANB1Q9UGI0 708 aa17.43■□□□□ 0.38
SFR1-203ENST00000463224 GABBR2O75899 941 aa17.42■□□□□ 0.38
SFR1-203ENST00000463224 FBXO3Q9UK99 471 aa17.42■□□□□ 0.38
SFR1-203ENST00000463224 PLEKHG5O94827 1062 aa17.37■□□□□ 0.37
SFR1-203ENST00000463224 ZNF579Q8NAF0 562 aaKnown RBP17.34■□□□□ 0.37
SFR1-203ENST00000463224 VASPP50552 380 aaPredicted RBP17.29■□□□□ 0.36
SFR1-203ENST00000463224 PHF12Q96QT6 1004 aa17.28■□□□□ 0.36
SFR1-203ENST00000463224 PAK3O75914 559 aaPredicted RBP17.27■□□□□ 0.36
SFR1-203ENST00000463224 RASEFQ8IZ41 740 aa17.27■□□□□ 0.36
SFR1-203ENST00000463224 TSPYL2Q9H2G4 693 aaPredicted RBP17.26■□□□□ 0.35
SFR1-203ENST00000463224 NUBP1P53384 320 aa17.21■□□□□ 0.35
SFR1-203ENST00000463224 ZBTB47Q9UFB7 747 aaPredicted RBP17.2■□□□□ 0.34
SFR1-203ENST00000463224 CCDC61Q9Y6R9 512 aa17.17■□□□□ 0.34
SFR1-203ENST00000463224 GALR2O43603 387 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms