RNA–Protein interactions for RNA: ENST00000463198.1

WDR48-207, Transcript of WD repeat domain 48, humanhuman

TSL 4

Gene WDR48, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR48-207ENST00000463198 AEBP2Q6ZN18 517 aaPredicted RBP27.08■■□□□ 1.93
WDR48-207ENST00000463198 CHIC1Q5VXU3 224 aa25.63■■□□□ 1.69
WDR48-207ENST00000463198 SENP3Q9H4L4 574 aaPredicted RBP23.27■■□□□ 1.32
WDR48-207ENST00000463198 PHF23Q9BUL5 403 aaPredicted RBP22.88■■□□□ 1.25
WDR48-207ENST00000463198 FOXD1Q16676 465 aa21.62■■□□□ 1.05
WDR48-207ENST00000463198 PLPPR3Q6T4P5 718 aa20.46■□□□□ 0.87
WDR48-207ENST00000463198 MSH5O43196 834 aa20.41■□□□□ 0.86
WDR48-207ENST00000463198 PIAS4Q8N2W9 510 aaPredicted RBP20.22■□□□□ 0.83
WDR48-207ENST00000463198 POTEDQ86YR6 584 aa20.11■□□□□ 0.81
WDR48-207ENST00000463198 PPP6R1Q9UPN7 881 aa20.04■□□□□ 0.8
WDR48-207ENST00000463198 ADRA2BP18089 450 aa19.99■□□□□ 0.79
WDR48-207ENST00000463198 SCAF1Q9H7N4 1312 aaKnown RBP18.46■□□□□ 0.55
WDR48-207ENST00000463198 MAPK8IP2Q13387 824 aaPredicted RBP18.39■□□□□ 0.53
WDR48-207ENST00000463198 DMRT2Q9Y5R5 561 aa18.39■□□□□ 0.53
WDR48-207ENST00000463198 PPP4R3CPQ6ZMV5 832 aa17.87■□□□□ 0.45
WDR48-207ENST00000463198 DCAF8L1A6NGE4 600 aa17.67■□□□□ 0.42
WDR48-207ENST00000463198 HOXD11P31277 338 aaPredicted RBP17.64■□□□□ 0.41
WDR48-207ENST00000463198 CNKSR2Q8WXI2 1034 aa17.61■□□□□ 0.41
WDR48-207ENST00000463198 CACNB1Q02641 598 aaPredicted RBP17.59■□□□□ 0.41
WDR48-207ENST00000463198 RNF216Q9NWF9 866 aaPredicted RBP17.5■□□□□ 0.39
WDR48-207ENST00000463198 RNF39Q9H2S5 420 aa17.34■□□□□ 0.37
WDR48-207ENST00000463198 NCBP3Q53F19 620 aaKnown RBP17.22■□□□□ 0.35
WDR48-207ENST00000463198 DNAJC5BQ9UF47 199 aa17.14■□□□□ 0.33
WDR48-207ENST00000463198 C1QBPQ07021 282 aaKnown RBP17.13■□□□□ 0.33
WDR48-207ENST00000463198 NPM3O75607 178 aaKnown RBP16.86■□□□□ 0.29
WDR48-207ENST00000463198 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.85■□□□□ 0.296e-6■□□□□ 8.2
WDR48-207ENST00000463198 U3KPZ7 1027 aaPredicted RBP16.41■□□□□ 0.22
WDR48-207ENST00000463198 KCNA4P22459 653 aa16.36■□□□□ 0.21
WDR48-207ENST00000463198 CAPN15O75808 1086 aa16.26■□□□□ 0.19
WDR48-207ENST00000463198 SPINK5Q9NQ38 1064 aaPredicted RBP16.21■□□□□ 0.19
WDR48-207ENST00000463198 DSG3P32926 999 aa16.17■□□□□ 0.18
WDR48-207ENST00000463198 SLC4A2P04920 1241 aa16.11■□□□□ 0.17
WDR48-207ENST00000463198 APLP2Q06481 763 aa16.11■□□□□ 0.17
WDR48-207ENST00000463198 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.03■□□□□ 0.16
WDR48-207ENST00000463198 HNRNPUL2Q1KMD3 747 aaKnown RBP16.03■□□□□ 0.16
WDR48-207ENST00000463198 ZNF219Q9P2Y4 722 aaPredicted RBP15.97■□□□□ 0.15
WDR48-207ENST00000463198 TRHP20396 242 aaPredicted RBP15.94■□□□□ 0.14
WDR48-207ENST00000463198 SAMD1Q6SPF0 538 aaPredicted RBP15.89■□□□□ 0.13
WDR48-207ENST00000463198 ABCB7O75027 752 aa15.82■□□□□ 0.12
WDR48-207ENST00000463198 POTEHQ6S545 545 aa15.76■□□□□ 0.11
WDR48-207ENST00000463198 MYCNP04198 464 aaPredicted RBP15.67■□□□□ 0.1
WDR48-207ENST00000463198 RBM42Q9BTD8 480 aaKnown RBP15.53■□□□□ 0.08
WDR48-207ENST00000463198 POLA2Q14181 598 aa15.47■□□□□ 0.07
WDR48-207ENST00000463198 SLC4A1APQ9BWU0 796 aaKnown RBP15.47■□□□□ 0.07
WDR48-207ENST00000463198 FOXD4L1Q9NU39 408 aa15.39■□□□□ 0.05
WDR48-207ENST00000463198 ZBTB12Q9Y330 459 aaPredicted RBP15.24■□□□□ 0.03
WDR48-207ENST00000463198 ATF5Q9Y2D1 282 aaPredicted RBP15.2■□□□□ 0.02
WDR48-207ENST00000463198 CHRDL2Q6WN34 429 aa15.19■□□□□ 0.02
WDR48-207ENST00000463198 AKT1S1Q96B36 256 aa15.1■□□□□ 0.01
WDR48-207ENST00000463198 ZBTB22O15209 634 aa14.99□□□□□ -0.01
WDR48-207ENST00000463198 ATXN8OSP0DMR3 200 aa14.98□□□□□ -0.01
WDR48-207ENST00000463198 OSCARQ8IYS5 282 aa14.96□□□□□ -0.01
WDR48-207ENST00000463198 REM2Q8IYK8 340 aaPredicted RBP14.91□□□□□ -0.02
WDR48-207ENST00000463198 FBLN2P98095 1184 aa14.77□□□□□ -0.05
WDR48-207ENST00000463198 PIP4P2Q8N4L2 257 aa14.77□□□□□ -0.05
WDR48-207ENST00000463198 PITPNM1O00562 1244 aa14.75□□□□□ -0.05
WDR48-207ENST00000463198 SP7Q8TDD2 431 aaPredicted RBP14.71□□□□□ -0.05
WDR48-207ENST00000463198 SPDYE2BA6NHP3 402 aa14.7□□□□□ -0.06
WDR48-207ENST00000463198 SPDYE6P0CI01 402 aa14.7□□□□□ -0.06
WDR48-207ENST00000463198 SPDYE2Q495Y8 402 aa14.7□□□□□ -0.06
WDR48-207ENST00000463198 FXR2P51116 673 aaKnown RBP eCLIP14.66□□□□□ -0.06
WDR48-207ENST00000463198 HAX1O00165 279 aa14.59□□□□□ -0.07
WDR48-207ENST00000463198 MKRN4PQ13434 485 aaPredicted RBP14.5□□□□□ -0.09
WDR48-207ENST00000463198 SPDYE1Q8NFV5 336 aaPredicted RBP14.5□□□□□ -0.09
WDR48-207ENST00000463198 ZNF692Q9BU19 519 aaPredicted RBP14.49□□□□□ -0.09
WDR48-207ENST00000463198 CLEC11AQ9Y240 323 aa14.46□□□□□ -0.09
WDR48-207ENST00000463198 SSUH2Q9Y2M2 353 aa14.44□□□□□ -0.1
WDR48-207ENST00000463198 PRKAR2AP13861 404 aaKnown RBP14.39□□□□□ -0.11
WDR48-207ENST00000463198 EVX2Q03828 476 aa14.28□□□□□ -0.12
WDR48-207ENST00000463198 PABPN1Q86U42 306 aaKnown RBP eCLIP14.25□□□□□ -0.13
WDR48-207ENST00000463198 PRR29P0C7W0 189 aa14.22□□□□□ -0.13
WDR48-207ENST00000463198 C19orf67A6NJJ6 358 aa14.2□□□□□ -0.14
WDR48-207ENST00000463198 CSRNP3Q8WYN3 585 aa14.18□□□□□ -0.14
WDR48-207ENST00000463198 CHADLQ6NUI6 762 aa14.14□□□□□ -0.15
WDR48-207ENST00000463198 GABBR2O75899 941 aa14.03□□□□□ -0.16
WDR48-207ENST00000463198 FARP1Q9Y4F1 1045 aaPredicted RBP13.96□□□□□ -0.17
WDR48-207ENST00000463198 CD44P16070 742 aaKnown RBP13.93□□□□□ -0.18
WDR48-207ENST00000463198 EHMT2Q96KQ7 1210 aa13.93□□□□□ -0.18
WDR48-207ENST00000463198 STAG3Q9UJ98 1225 aa13.9□□□□□ -0.18
WDR48-207ENST00000463198 CLCN6P51797 869 aa13.88□□□□□ -0.19
WDR48-207ENST00000463198 SPDYE4A6NLX3 237 aa13.81□□□□□ -0.2
WDR48-207ENST00000463198 LHX8Q68G74 356 aa13.79□□□□□ -0.2
WDR48-207ENST00000463198 CREBZFQ9NS37 354 aa13.75□□□□□ -0.21
WDR48-207ENST00000463198 ZNF579Q8NAF0 562 aaKnown RBP13.7□□□□□ -0.22
WDR48-207ENST00000463198 ZRANB1Q9UGI0 708 aa13.7□□□□□ -0.22
WDR48-207ENST00000463198 DCBLD2Q96PD2 775 aa13.68□□□□□ -0.22
WDR48-207ENST00000463198 POTEIP0CG38 1075 aa13.66□□□□□ -0.22
WDR48-207ENST00000463198 PAK3O75914 559 aaPredicted RBP13.64□□□□□ -0.23
WDR48-207ENST00000463198 NPM1P06748 294 aaKnown RBP eCLIP13.61□□□□□ -0.23
WDR48-207ENST00000463198 GALR2O43603 387 aaPredicted RBP13.5□□□□□ -0.25
WDR48-207ENST00000463198 MNX1P50219 401 aaPredicted RBP13.47□□□□□ -0.25
WDR48-207ENST00000463198 PHF12Q96QT6 1004 aa13.45□□□□□ -0.26
WDR48-207ENST00000463198 PROM2Q8N271 834 aa13.41□□□□□ -0.26
WDR48-207ENST00000463198 PLEKHG5O94827 1062 aa13.32□□□□□ -0.28
WDR48-207ENST00000463198 MS4A3Q96HJ5 214 aa13.27□□□□□ -0.29
WDR48-207ENST00000463198 TSPYL2Q9H2G4 693 aaPredicted RBP13.27□□□□□ -0.29
WDR48-207ENST00000463198 ASTLQ6HA08 431 aaPredicted RBP13.25□□□□□ -0.29
WDR48-207ENST00000463198 OTUD5Q96G74 571 aa13.23□□□□□ -0.29
WDR48-207ENST00000463198 PELP1Q8IZL8 1130 aaKnown RBP13.22□□□□□ -0.29
WDR48-207ENST00000463198 MIER1Q8N108 512 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms