RNA–Protein interactions for RNA: ENST00000462850.1

USP9X-203, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 4

Gene USP9X, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-203ENST00000462850 AEBP2Q6ZN18 517 aaPredicted RBP21.05■□□□□ 0.96
USP9X-203ENST00000462850 CHIC1Q5VXU3 224 aa20.34■□□□□ 0.85
USP9X-203ENST00000462850 SENP3Q9H4L4 574 aaPredicted RBP18.01■□□□□ 0.47
USP9X-203ENST00000462850 PHF23Q9BUL5 403 aaPredicted RBP17.9■□□□□ 0.46
USP9X-203ENST00000462850 FOXD1Q16676 465 aa16.9■□□□□ 0.3
USP9X-203ENST00000462850 POTEDQ86YR6 584 aa16.79■□□□□ 0.28
USP9X-203ENST00000462850 PLPPR3Q6T4P5 718 aa16.68■□□□□ 0.26
USP9X-203ENST00000462850 MSH5O43196 834 aa16.02■□□□□ 0.16
USP9X-203ENST00000462850 ADRA2BP18089 450 aa15.69■□□□□ 0.1
USP9X-203ENST00000462850 PPP6R1Q9UPN7 881 aa15.68■□□□□ 0.1
USP9X-203ENST00000462850 PIAS4Q8N2W9 510 aaPredicted RBP15.64■□□□□ 0.09
USP9X-203ENST00000462850 KCNA4P22459 653 aa14.72□□□□□ -0.05
USP9X-203ENST00000462850 PPP4R3CPQ6ZMV5 832 aa14.72□□□□□ -0.05
USP9X-203ENST00000462850 NCBP3Q53F19 620 aaKnown RBP14.46□□□□□ -0.09
USP9X-203ENST00000462850 SCAF1Q9H7N4 1312 aaKnown RBP14.41□□□□□ -0.1
USP9X-203ENST00000462850 CNKSR2Q8WXI2 1034 aa14.26□□□□□ -0.13
USP9X-203ENST00000462850 NPM3O75607 178 aaKnown RBP14.21□□□□□ -0.13
USP9X-203ENST00000462850 MAPK8IP2Q13387 824 aaPredicted RBP14.19□□□□□ -0.14
USP9X-203ENST00000462850 CACNB1Q02641 598 aaPredicted RBP14.18□□□□□ -0.14
USP9X-203ENST00000462850 DMRT2Q9Y5R5 561 aa14.18□□□□□ -0.14
USP9X-203ENST00000462850 SLC4A1APQ9BWU0 796 aaKnown RBP14.1□□□□□ -0.15
USP9X-203ENST00000462850 EHMT2Q96KQ7 1210 aa14.04□□□□□ -0.16
USP9X-203ENST00000462850 RNF216Q9NWF9 866 aaPredicted RBP13.9□□□□□ -0.18
USP9X-203ENST00000462850 DNAJC5BQ9UF47 199 aa13.8□□□□□ -0.2
USP9X-203ENST00000462850 HOXD11P31277 338 aaPredicted RBP13.75□□□□□ -0.21
USP9X-203ENST00000462850 CSRNP3Q8WYN3 585 aa13.75□□□□□ -0.21
USP9X-203ENST00000462850 DCAF8L1A6NGE4 600 aa13.68□□□□□ -0.22
USP9X-203ENST00000462850 RNF39Q9H2S5 420 aa13.63□□□□□ -0.23
USP9X-203ENST00000462850 ZBTB22O15209 634 aa13.54□□□□□ -0.24
USP9X-203ENST00000462850 FOXD4L1Q9NU39 408 aa13.48□□□□□ -0.25
USP9X-203ENST00000462850 C1QBPQ07021 282 aaKnown RBP13.37□□□□□ -0.27
USP9X-203ENST00000462850 SLC4A2P04920 1241 aa13.33□□□□□ -0.28
USP9X-203ENST00000462850 MYCNP04198 464 aaPredicted RBP13.15□□□□□ -0.3
USP9X-203ENST00000462850 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.1□□□□□ -0.31
USP9X-203ENST00000462850 ATXN8OSP0DMR3 200 aa13.02□□□□□ -0.33
USP9X-203ENST00000462850 POTEHQ6S545 545 aa13.02□□□□□ -0.33
USP9X-203ENST00000462850 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.91□□□□□ -0.34
USP9X-203ENST00000462850 HNRNPUL2Q1KMD3 747 aaKnown RBP12.91□□□□□ -0.34
USP9X-203ENST00000462850 U3KPZ7 1027 aaPredicted RBP12.91□□□□□ -0.34
USP9X-203ENST00000462850 SAMD1Q6SPF0 538 aaPredicted RBP12.86□□□□□ -0.35
USP9X-203ENST00000462850 ATF5Q9Y2D1 282 aaPredicted RBP12.73□□□□□ -0.37
USP9X-203ENST00000462850 APLP2Q06481 763 aa12.71□□□□□ -0.37
USP9X-203ENST00000462850 DSG3P32926 999 aa12.55□□□□□ -0.4
USP9X-203ENST00000462850 ZNF219Q9P2Y4 722 aaPredicted RBP12.53□□□□□ -0.4
USP9X-203ENST00000462850 SPINK5Q9NQ38 1064 aaPredicted RBP12.5□□□□□ -0.41
USP9X-203ENST00000462850 CAPN15O75808 1086 aa12.49□□□□□ -0.41
USP9X-203ENST00000462850 TRHP20396 242 aaPredicted RBP12.41□□□□□ -0.42
USP9X-203ENST00000462850 FKBP8Q14318 412 aa12.41□□□□□ -0.42
USP9X-203ENST00000462850 POLA2Q14181 598 aa12.29□□□□□ -0.44
USP9X-203ENST00000462850 FBLN2P98095 1184 aa12.22□□□□□ -0.45
USP9X-203ENST00000462850 MKRN4PQ13434 485 aaPredicted RBP12.2□□□□□ -0.46
USP9X-203ENST00000462850 ABCB7O75027 752 aa12.17□□□□□ -0.46
USP9X-203ENST00000462850 ZBTB12Q9Y330 459 aaPredicted RBP12.15□□□□□ -0.46
USP9X-203ENST00000462850 SPDYE4A6NLX3 237 aa12.1□□□□□ -0.47
USP9X-203ENST00000462850 CHRDL2Q6WN34 429 aa12□□□□□ -0.49
USP9X-203ENST00000462850 PROM2Q8N271 834 aa11.96□□□□□ -0.49
USP9X-203ENST00000462850 RBM42Q9BTD8 480 aaKnown RBP11.96□□□□□ -0.49
USP9X-203ENST00000462850 FBXO3Q9UK99 471 aa11.93□□□□□ -0.5
USP9X-203ENST00000462850 AMER1Q5JTC6 1135 aaPredicted RBP11.91□□□□□ -0.5
USP9X-203ENST00000462850 SP7Q8TDD2 431 aaPredicted RBP11.89□□□□□ -0.51
USP9X-203ENST00000462850 RTN4Q9NQC3 1192 aaKnown RBP11.84□□□□□ -0.51
USP9X-203ENST00000462850 SPDYE2BA6NHP3 402 aa11.83□□□□□ -0.52
USP9X-203ENST00000462850 SPDYE6P0CI01 402 aa11.83□□□□□ -0.52
USP9X-203ENST00000462850 SPDYE2Q495Y8 402 aa11.83□□□□□ -0.52
USP9X-203ENST00000462850 OSCARQ8IYS5 282 aa11.83□□□□□ -0.52
USP9X-203ENST00000462850 ZNF692Q9BU19 519 aaPredicted RBP11.83□□□□□ -0.52
USP9X-203ENST00000462850 SSUH2Q9Y2M2 353 aa11.76□□□□□ -0.53
USP9X-203ENST00000462850 VASPP50552 380 aaPredicted RBP11.72□□□□□ -0.53
USP9X-203ENST00000462850 PABPN1Q86U42 306 aaKnown RBP eCLIP11.67□□□□□ -0.54
USP9X-203ENST00000462850 STAG3Q9UJ98 1225 aa11.62□□□□□ -0.55
USP9X-203ENST00000462850 IFNLR1Q8IU57 520 aaPredicted RBP11.58□□□□□ -0.56
USP9X-203ENST00000462850 PIP4P2Q8N4L2 257 aa11.57□□□□□ -0.56
USP9X-203ENST00000462850 AKT1S1Q96B36 256 aa11.55□□□□□ -0.56
USP9X-203ENST00000462850 HAX1O00165 279 aa11.54□□□□□ -0.56
USP9X-203ENST00000462850 REM2Q8IYK8 340 aaPredicted RBP11.47□□□□□ -0.57
USP9X-203ENST00000462850 PLCD3Q8N3E9 789 aa11.47□□□□□ -0.57
USP9X-203ENST00000462850 MIER1Q8N108 512 aa11.45□□□□□ -0.58
USP9X-203ENST00000462850 KLHL34Q8N239 644 aa11.45□□□□□ -0.58
USP9X-203ENST00000462850 SPOCK2Q92563 424 aa11.41□□□□□ -0.58
USP9X-203ENST00000462850 PLEKHG5O94827 1062 aa11.4□□□□□ -0.58
USP9X-203ENST00000462850 SPDYE1Q8NFV5 336 aaPredicted RBP11.4□□□□□ -0.58
USP9X-203ENST00000462850 PITPNM1O00562 1244 aa11.38□□□□□ -0.59
USP9X-203ENST00000462850 EVX2Q03828 476 aa11.38□□□□□ -0.59
USP9X-203ENST00000462850 FXR2P51116 673 aaKnown RBP eCLIP11.37□□□□□ -0.591e-7■■■■□ 23.3
USP9X-203ENST00000462850 ZBTB47Q9UFB7 747 aaPredicted RBP11.35□□□□□ -0.59
USP9X-203ENST00000462850 PKD2Q13563 968 aa11.31□□□□□ -0.6
USP9X-203ENST00000462850 CLEC11AQ9Y240 323 aa11.31□□□□□ -0.6
USP9X-203ENST00000462850 PRR29P0C7W0 189 aa11.28□□□□□ -0.6
USP9X-203ENST00000462850 SLC24A1O60721 1099 aa11.24□□□□□ -0.61
USP9X-203ENST00000462850 ECM2O94769 699 aaPredicted RBP11.2□□□□□ -0.62
USP9X-203ENST00000462850 CREBZFQ9NS37 354 aa11.19□□□□□ -0.62
USP9X-203ENST00000462850 DCAF8L2P0C7V8 631 aa11.17□□□□□ -0.62
USP9X-203ENST00000462850 CIZ1Q9ULV3 898 aaPredicted RBP11.16□□□□□ -0.62
USP9X-203ENST00000462850 LHX8Q68G74 356 aa11.15□□□□□ -0.62
USP9X-203ENST00000462850 MNX1P50219 401 aaPredicted RBP11.11□□□□□ -0.63
USP9X-203ENST00000462850 NUBP1P53384 320 aa11.11□□□□□ -0.63
USP9X-203ENST00000462850 GSE1Q14687 1217 aa11.11□□□□□ -0.63
USP9X-203ENST00000462850 TRIM41Q8WV44 630 aa11.11□□□□□ -0.63
USP9X-203ENST00000462850 PRKAR2AP13861 404 aaKnown RBP11.07□□□□□ -0.64
USP9X-203ENST00000462850 NISCHQ9Y2I1 1504 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms