RNA–Protein interactions for RNA: ENST00000462830.1

PDCD10-204, Transcript of programmed cell death 10, humanhuman

TSL 3

Gene PDCD10, Length 225 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-204ENST00000462830 AEBP2Q6ZN18 517 aaPredicted RBP27.09■■□□□ 1.93
PDCD10-204ENST00000462830 CHIC1Q5VXU3 224 aa25.83■■□□□ 1.73
PDCD10-204ENST00000462830 SENP3Q9H4L4 574 aaPredicted RBP22.96■■□□□ 1.27
PDCD10-204ENST00000462830 PHF23Q9BUL5 403 aaPredicted RBP22.76■■□□□ 1.23
PDCD10-204ENST00000462830 FOXD1Q16676 465 aa21.46■■□□□ 1.03
PDCD10-204ENST00000462830 PLPPR3Q6T4P5 718 aa20.68■□□□□ 0.9
PDCD10-204ENST00000462830 PPP6R1Q9UPN7 881 aa20.26■□□□□ 0.83
PDCD10-204ENST00000462830 ADRA2BP18089 450 aa20.2■□□□□ 0.82
PDCD10-204ENST00000462830 PIAS4Q8N2W9 510 aaPredicted RBP20.08■□□□□ 0.81
PDCD10-204ENST00000462830 MSH5O43196 834 aa19.91■□□□□ 0.78
PDCD10-204ENST00000462830 POTEDQ86YR6 584 aa19.21■□□□□ 0.67
PDCD10-204ENST00000462830 MAPK8IP2Q13387 824 aaPredicted RBP18.52■□□□□ 0.56
PDCD10-204ENST00000462830 SCAF1Q9H7N4 1312 aaKnown RBP18.33■□□□□ 0.53
PDCD10-204ENST00000462830 DMRT2Q9Y5R5 561 aa18.26■□□□□ 0.51
PDCD10-204ENST00000462830 PPP4R3CPQ6ZMV5 832 aa18.2■□□□□ 0.5
PDCD10-204ENST00000462830 CNKSR2Q8WXI2 1034 aa17.77■□□□□ 0.44
PDCD10-204ENST00000462830 HOXD11P31277 338 aaPredicted RBP17.65■□□□□ 0.42
PDCD10-204ENST00000462830 RNF216Q9NWF9 866 aaPredicted RBP17.56■□□□□ 0.4
PDCD10-204ENST00000462830 DCAF8L1A6NGE4 600 aa17.55■□□□□ 0.4
PDCD10-204ENST00000462830 NCBP3Q53F19 620 aaKnown RBP17.47■□□□□ 0.39
PDCD10-204ENST00000462830 NPM3O75607 178 aaKnown RBP17.33■□□□□ 0.36
PDCD10-204ENST00000462830 KCNA4P22459 653 aa17.19■□□□□ 0.34
PDCD10-204ENST00000462830 RNF39Q9H2S5 420 aa17.06■□□□□ 0.32
PDCD10-204ENST00000462830 CACNB1Q02641 598 aaPredicted RBP17.03■□□□□ 0.32
PDCD10-204ENST00000462830 DNAJC5BQ9UF47 199 aa16.92■□□□□ 0.3
PDCD10-204ENST00000462830 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.83■□□□□ 0.28
PDCD10-204ENST00000462830 C1QBPQ07021 282 aaKnown RBP16.77■□□□□ 0.28
PDCD10-204ENST00000462830 U3KPZ7 1027 aaPredicted RBP16.54■□□□□ 0.24
PDCD10-204ENST00000462830 SLC4A2P04920 1241 aa16.52■□□□□ 0.24
PDCD10-204ENST00000462830 SPINK5Q9NQ38 1064 aaPredicted RBP16.28■□□□□ 0.2
PDCD10-204ENST00000462830 SLC4A1APQ9BWU0 796 aaKnown RBP16.21■□□□□ 0.19
PDCD10-204ENST00000462830 CAPN15O75808 1086 aa16.19■□□□□ 0.18
PDCD10-204ENST00000462830 DSG3P32926 999 aa16.06■□□□□ 0.16
PDCD10-204ENST00000462830 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.01■□□□□ 0.15
PDCD10-204ENST00000462830 HNRNPUL2Q1KMD3 747 aaKnown RBP16.01■□□□□ 0.15
PDCD10-204ENST00000462830 TRHP20396 242 aaPredicted RBP16■□□□□ 0.15
PDCD10-204ENST00000462830 MYCNP04198 464 aaPredicted RBP15.96■□□□□ 0.15
PDCD10-204ENST00000462830 SAMD1Q6SPF0 538 aaPredicted RBP15.95■□□□□ 0.14
PDCD10-204ENST00000462830 APLP2Q06481 763 aa15.94■□□□□ 0.14
PDCD10-204ENST00000462830 FOXD4L1Q9NU39 408 aa15.91■□□□□ 0.14
PDCD10-204ENST00000462830 ZNF219Q9P2Y4 722 aaPredicted RBP15.89■□□□□ 0.13
PDCD10-204ENST00000462830 ABCB7O75027 752 aa15.88■□□□□ 0.13
PDCD10-204ENST00000462830 ZBTB22O15209 634 aa15.83■□□□□ 0.12
PDCD10-204ENST00000462830 ATF5Q9Y2D1 282 aaPredicted RBP15.7■□□□□ 0.1
PDCD10-204ENST00000462830 POLA2Q14181 598 aa15.61■□□□□ 0.09
PDCD10-204ENST00000462830 ATXN8OSP0DMR3 200 aa15.34■□□□□ 0.05
PDCD10-204ENST00000462830 CSRNP3Q8WYN3 585 aa15.25■□□□□ 0.03
PDCD10-204ENST00000462830 RBM42Q9BTD8 480 aaKnown RBP15.22■□□□□ 0.03
PDCD10-204ENST00000462830 EHMT2Q96KQ7 1210 aa15.17■□□□□ 0.02
PDCD10-204ENST00000462830 ZBTB12Q9Y330 459 aaPredicted RBP15.17■□□□□ 0.02
PDCD10-204ENST00000462830 OSCARQ8IYS5 282 aa15.11■□□□□ 0.01
PDCD10-204ENST00000462830 POTEHQ6S545 545 aa15.07■□□□□ 0
PDCD10-204ENST00000462830 MKRN4PQ13434 485 aaPredicted RBP14.95□□□□□ -0.02
PDCD10-204ENST00000462830 AKT1S1Q96B36 256 aa14.95□□□□□ -0.02
PDCD10-204ENST00000462830 FBLN2P98095 1184 aa14.94□□□□□ -0.02
PDCD10-204ENST00000462830 CHRDL2Q6WN34 429 aa14.89□□□□□ -0.03
PDCD10-204ENST00000462830 REM2Q8IYK8 340 aaPredicted RBP14.86□□□□□ -0.03
PDCD10-204ENST00000462830 SPDYE2BA6NHP3 402 aa14.77□□□□□ -0.05
PDCD10-204ENST00000462830 SPDYE6P0CI01 402 aa14.77□□□□□ -0.05
PDCD10-204ENST00000462830 SPDYE2Q495Y8 402 aa14.77□□□□□ -0.05
PDCD10-204ENST00000462830 PITPNM1O00562 1244 aa14.71□□□□□ -0.05
PDCD10-204ENST00000462830 ZNF692Q9BU19 519 aaPredicted RBP14.68□□□□□ -0.06
PDCD10-204ENST00000462830 SSUH2Q9Y2M2 353 aa14.63□□□□□ -0.07
PDCD10-204ENST00000462830 PIP4P2Q8N4L2 257 aa14.59□□□□□ -0.07
PDCD10-204ENST00000462830 FXR2P51116 673 aaKnown RBP eCLIP14.52□□□□□ -0.09
PDCD10-204ENST00000462830 CLEC11AQ9Y240 323 aa14.51□□□□□ -0.09
PDCD10-204ENST00000462830 PABPN1Q86U42 306 aaKnown RBP eCLIP14.48□□□□□ -0.09
PDCD10-204ENST00000462830 SPDYE1Q8NFV5 336 aaPredicted RBP14.48□□□□□ -0.09
PDCD10-204ENST00000462830 PRKAR2AP13861 404 aaKnown RBP14.32□□□□□ -0.12
PDCD10-204ENST00000462830 SPDYE4A6NLX3 237 aa14.29□□□□□ -0.12
PDCD10-204ENST00000462830 HAX1O00165 279 aa14.28□□□□□ -0.12
PDCD10-204ENST00000462830 PRR29P0C7W0 189 aa14.26□□□□□ -0.13
PDCD10-204ENST00000462830 CHADLQ6NUI6 762 aa14.26□□□□□ -0.13
PDCD10-204ENST00000462830 EVX2Q03828 476 aa14.2□□□□□ -0.14
PDCD10-204ENST00000462830 SP7Q8TDD2 431 aaPredicted RBP14.2□□□□□ -0.14
PDCD10-204ENST00000462830 C19orf67A6NJJ6 358 aa14.04□□□□□ -0.16
PDCD10-204ENST00000462830 STAG3Q9UJ98 1225 aa14.02□□□□□ -0.17
PDCD10-204ENST00000462830 FARP1Q9Y4F1 1045 aaPredicted RBP14□□□□□ -0.17
PDCD10-204ENST00000462830 CREBZFQ9NS37 354 aa13.99□□□□□ -0.17
PDCD10-204ENST00000462830 PROM2Q8N271 834 aa13.95□□□□□ -0.18
PDCD10-204ENST00000462830 CD44P16070 742 aaKnown RBP13.87□□□□□ -0.19
PDCD10-204ENST00000462830 GABBR2O75899 941 aa13.82□□□□□ -0.2
PDCD10-204ENST00000462830 FKBP8Q14318 412 aa13.81□□□□□ -0.2
PDCD10-204ENST00000462830 MNX1P50219 401 aaPredicted RBP13.78□□□□□ -0.2
PDCD10-204ENST00000462830 ZRANB1Q9UGI0 708 aa13.72□□□□□ -0.21
PDCD10-204ENST00000462830 NPM1P06748 294 aaKnown RBP eCLIP13.65□□□□□ -0.22
PDCD10-204ENST00000462830 ZNF579Q8NAF0 562 aaKnown RBP13.64□□□□□ -0.23
PDCD10-204ENST00000462830 MIER1Q8N108 512 aa13.62□□□□□ -0.23
PDCD10-204ENST00000462830 PAK3O75914 559 aaPredicted RBP13.57□□□□□ -0.24
PDCD10-204ENST00000462830 POTEIP0CG38 1075 aa13.57□□□□□ -0.24
PDCD10-204ENST00000462830 PHF12Q96QT6 1004 aa13.57□□□□□ -0.24
PDCD10-204ENST00000462830 GALR2O43603 387 aaPredicted RBP13.53□□□□□ -0.24
PDCD10-204ENST00000462830 CLCN6P51797 869 aa13.52□□□□□ -0.25
PDCD10-204ENST00000462830 PLCD3Q8N3E9 789 aa13.51□□□□□ -0.25
PDCD10-204ENST00000462830 TSPYL2Q9H2G4 693 aaPredicted RBP13.51□□□□□ -0.25
PDCD10-204ENST00000462830 PLEKHG5O94827 1062 aa13.5□□□□□ -0.25
PDCD10-204ENST00000462830 DCBLD2Q96PD2 775 aa13.45□□□□□ -0.26
PDCD10-204ENST00000462830 RASEFQ8IZ41 740 aa13.44□□□□□ -0.26
PDCD10-204ENST00000462830 CCDC61Q9Y6R9 512 aa13.41□□□□□ -0.26
PDCD10-204ENST00000462830 MS4A3Q96HJ5 214 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms