RNA–Protein interactions for RNA: ENST00000462657.1

ANKRD28-207, Transcript of ankyrin repeat domain 28, humanhuman

TSL 3

Gene ANKRD28, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-207ENST00000462657 AEBP2Q6ZN18 517 aaPredicted RBP20.62■□□□□ 0.89
ANKRD28-207ENST00000462657 CHIC1Q5VXU3 224 aa19.83■□□□□ 0.77
ANKRD28-207ENST00000462657 SENP3Q9H4L4 574 aaPredicted RBP17.51■□□□□ 0.39
ANKRD28-207ENST00000462657 PHF23Q9BUL5 403 aaPredicted RBP17.42■□□□□ 0.38
ANKRD28-207ENST00000462657 FOXD1Q16676 465 aa16.31■□□□□ 0.2
ANKRD28-207ENST00000462657 POTEDQ86YR6 584 aa16.26■□□□□ 0.19
ANKRD28-207ENST00000462657 PLPPR3Q6T4P5 718 aa15.93■□□□□ 0.14
ANKRD28-207ENST00000462657 PPP6R1Q9UPN7 881 aa15.46■□□□□ 0.07
ANKRD28-207ENST00000462657 ADRA2BP18089 450 aa15.39■□□□□ 0.05
ANKRD28-207ENST00000462657 PIAS4Q8N2W9 510 aaPredicted RBP15.26■□□□□ 0.03
ANKRD28-207ENST00000462657 MSH5O43196 834 aa15.14■□□□□ 0.01
ANKRD28-207ENST00000462657 MAPK8IP2Q13387 824 aaPredicted RBP14.07□□□□□ -0.16
ANKRD28-207ENST00000462657 SCAF1Q9H7N4 1312 aaKnown RBP14.06□□□□□ -0.16
ANKRD28-207ENST00000462657 PPP4R3CPQ6ZMV5 832 aa14□□□□□ -0.17
ANKRD28-207ENST00000462657 DMRT2Q9Y5R5 561 aa13.95□□□□□ -0.18
ANKRD28-207ENST00000462657 CNKSR2Q8WXI2 1034 aa13.68□□□□□ -0.22
ANKRD28-207ENST00000462657 HOXD11P31277 338 aaPredicted RBP13.56□□□□□ -0.24
ANKRD28-207ENST00000462657 NCBP3Q53F19 620 aaKnown RBP13.51□□□□□ -0.25
ANKRD28-207ENST00000462657 RNF216Q9NWF9 866 aaPredicted RBP13.5□□□□□ -0.25
ANKRD28-207ENST00000462657 NPM3O75607 178 aaKnown RBP13.36□□□□□ -0.27
ANKRD28-207ENST00000462657 KCNA4P22459 653 aa13.32□□□□□ -0.28
ANKRD28-207ENST00000462657 DCAF8L1A6NGE4 600 aa13.25□□□□□ -0.29
ANKRD28-207ENST00000462657 CACNB1Q02641 598 aaPredicted RBP13.13□□□□□ -0.31
ANKRD28-207ENST00000462657 DNAJC5BQ9UF47 199 aa13.1□□□□□ -0.31
ANKRD28-207ENST00000462657 RNF39Q9H2S5 420 aa12.97□□□□□ -0.33
ANKRD28-207ENST00000462657 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.83□□□□□ -0.36
ANKRD28-207ENST00000462657 C1QBPQ07021 282 aaKnown RBP12.79□□□□□ -0.36
ANKRD28-207ENST00000462657 SLC4A2P04920 1241 aa12.71□□□□□ -0.37
ANKRD28-207ENST00000462657 U3KPZ7 1027 aaPredicted RBP12.65□□□□□ -0.38
ANKRD28-207ENST00000462657 SLC4A1APQ9BWU0 796 aaKnown RBP12.6□□□□□ -0.39
ANKRD28-207ENST00000462657 POTEHQ6S545 545 aa12.47□□□□□ -0.41
ANKRD28-207ENST00000462657 SPINK5Q9NQ38 1064 aaPredicted RBP12.37□□□□□ -0.43
ANKRD28-207ENST00000462657 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.35□□□□□ -0.43
ANKRD28-207ENST00000462657 HNRNPUL2Q1KMD3 747 aaKnown RBP12.35□□□□□ -0.43
ANKRD28-207ENST00000462657 FOXD4L1Q9NU39 408 aa12.35□□□□□ -0.43
ANKRD28-207ENST00000462657 MYCNP04198 464 aaPredicted RBP12.33□□□□□ -0.44
ANKRD28-207ENST00000462657 SAMD1Q6SPF0 538 aaPredicted RBP12.3□□□□□ -0.44
ANKRD28-207ENST00000462657 CAPN15O75808 1086 aa12.29□□□□□ -0.44
ANKRD28-207ENST00000462657 ZBTB22O15209 634 aa12.28□□□□□ -0.44
ANKRD28-207ENST00000462657 APLP2Q06481 763 aa12.27□□□□□ -0.45
ANKRD28-207ENST00000462657 DSG3P32926 999 aa12.23□□□□□ -0.45
ANKRD28-207ENST00000462657 ZNF219Q9P2Y4 722 aaPredicted RBP12.18□□□□□ -0.46
ANKRD28-207ENST00000462657 TRHP20396 242 aaPredicted RBP12.16□□□□□ -0.46
ANKRD28-207ENST00000462657 ATF5Q9Y2D1 282 aaPredicted RBP12.04□□□□□ -0.48
ANKRD28-207ENST00000462657 ABCB7O75027 752 aa12.03□□□□□ -0.48
ANKRD28-207ENST00000462657 ATXN8OSP0DMR3 200 aa11.96□□□□□ -0.49
ANKRD28-207ENST00000462657 CSRNP3Q8WYN3 585 aa11.94□□□□□ -0.5
ANKRD28-207ENST00000462657 POLA2Q14181 598 aa11.92□□□□□ -0.5
ANKRD28-207ENST00000462657 EHMT2Q96KQ7 1210 aa11.84□□□□□ -0.51
ANKRD28-207ENST00000462657 ZBTB12Q9Y330 459 aaPredicted RBP11.7□□□□□ -0.54
ANKRD28-207ENST00000462657 RBM42Q9BTD8 480 aaKnown RBP11.63□□□□□ -0.55
ANKRD28-207ENST00000462657 OSCARQ8IYS5 282 aa11.53□□□□□ -0.56
ANKRD28-207ENST00000462657 MKRN4PQ13434 485 aaPredicted RBP11.52□□□□□ -0.57
ANKRD28-207ENST00000462657 FBLN2P98095 1184 aa11.49□□□□□ -0.57
ANKRD28-207ENST00000462657 AKT1S1Q96B36 256 aa11.44□□□□□ -0.58
ANKRD28-207ENST00000462657 SPDYE2BA6NHP3 402 aa11.38□□□□□ -0.59
ANKRD28-207ENST00000462657 SPDYE6P0CI01 402 aa11.38□□□□□ -0.59
ANKRD28-207ENST00000462657 SPDYE2Q495Y8 402 aa11.38□□□□□ -0.59
ANKRD28-207ENST00000462657 REM2Q8IYK8 340 aaPredicted RBP11.32□□□□□ -0.6
ANKRD28-207ENST00000462657 SSUH2Q9Y2M2 353 aa11.29□□□□□ -0.6
ANKRD28-207ENST00000462657 CHRDL2Q6WN34 429 aa11.28□□□□□ -0.6
ANKRD28-207ENST00000462657 ZNF692Q9BU19 519 aaPredicted RBP11.25□□□□□ -0.61
ANKRD28-207ENST00000462657 PITPNM1O00562 1244 aa11.19□□□□□ -0.62
ANKRD28-207ENST00000462657 PABPN1Q86U42 306 aaKnown RBP eCLIP11.1□□□□□ -0.63
ANKRD28-207ENST00000462657 SPDYE1Q8NFV5 336 aaPredicted RBP11.1□□□□□ -0.63
ANKRD28-207ENST00000462657 FXR2P51116 673 aaKnown RBP eCLIP11.08□□□□□ -0.64
ANKRD28-207ENST00000462657 PIP4P2Q8N4L2 257 aa11.08□□□□□ -0.64
ANKRD28-207ENST00000462657 SP7Q8TDD2 431 aaPredicted RBP11.07□□□□□ -0.64
ANKRD28-207ENST00000462657 SPDYE4A6NLX3 237 aa11.06□□□□□ -0.64
ANKRD28-207ENST00000462657 CLEC11AQ9Y240 323 aa11.02□□□□□ -0.65
ANKRD28-207ENST00000462657 PROM2Q8N271 834 aa10.92□□□□□ -0.66
ANKRD28-207ENST00000462657 PRR29P0C7W0 189 aa10.9□□□□□ -0.66
ANKRD28-207ENST00000462657 PRKAR2AP13861 404 aaKnown RBP10.89□□□□□ -0.67
ANKRD28-207ENST00000462657 STAG3Q9UJ98 1225 aa10.86□□□□□ -0.67
ANKRD28-207ENST00000462657 PLSCR2Q9NRY7 297 aa10.84□□□□□ -0.67
ANKRD28-207ENST00000462657 CHADLQ6NUI6 762 aa10.82□□□□□ -0.68
ANKRD28-207ENST00000462657 FKBP8Q14318 412 aa10.76□□□□□ -0.69
ANKRD28-207ENST00000462657 HAX1O00165 279 aa10.75□□□□□ -0.69
ANKRD28-207ENST00000462657 CREBZFQ9NS37 354 aa10.74□□□□□ -0.69
ANKRD28-207ENST00000462657 C19orf67A6NJJ6 358 aa10.71□□□□□ -0.69
ANKRD28-207ENST00000462657 EVX2Q03828 476 aa10.71□□□□□ -0.69
ANKRD28-207ENST00000462657 FARP1Q9Y4F1 1045 aaPredicted RBP10.71□□□□□ -0.69
ANKRD28-207ENST00000462657 MNX1P50219 401 aaPredicted RBP10.62□□□□□ -0.71
ANKRD28-207ENST00000462657 CD44P16070 742 aaKnown RBP10.56□□□□□ -0.72
ANKRD28-207ENST00000462657 NPM1P06748 294 aaKnown RBP eCLIP10.5□□□□□ -0.73
ANKRD28-207ENST00000462657 MIER1Q8N108 512 aa10.48□□□□□ -0.73
ANKRD28-207ENST00000462657 GABBR2O75899 941 aa10.46□□□□□ -0.73
ANKRD28-207ENST00000462657 FBXO3Q9UK99 471 aa10.46□□□□□ -0.73
ANKRD28-207ENST00000462657 ZNF579Q8NAF0 562 aaKnown RBP10.44□□□□□ -0.74
ANKRD28-207ENST00000462657 ZRANB1Q9UGI0 708 aa10.44□□□□□ -0.74
ANKRD28-207ENST00000462657 PLEKHG5O94827 1062 aa10.43□□□□□ -0.74
ANKRD28-207ENST00000462657 PLCD3Q8N3E9 789 aa10.43□□□□□ -0.74
ANKRD28-207ENST00000462657 CLCN6P51797 869 aa10.41□□□□□ -0.74
ANKRD28-207ENST00000462657 PAK3O75914 559 aaPredicted RBP10.38□□□□□ -0.75
ANKRD28-207ENST00000462657 LHX8Q68G74 356 aa10.38□□□□□ -0.75
ANKRD28-207ENST00000462657 ZBTB47Q9UFB7 747 aaPredicted RBP10.36□□□□□ -0.75
ANKRD28-207ENST00000462657 VASPP50552 380 aaPredicted RBP10.35□□□□□ -0.75
ANKRD28-207ENST00000462657 NUBP1P53384 320 aa10.33□□□□□ -0.76
ANKRD28-207ENST00000462657 RASEFQ8IZ41 740 aa10.33□□□□□ -0.76
ANKRD28-207ENST00000462657 PHF12Q96QT6 1004 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms