RNA–Protein interactions for RNA: ENST00000462376.1

LYST-204, Transcript of lysosomal trafficking regulator, humanhuman

TSL 4

Gene LYST, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYST-204ENST00000462376 AEBP2Q6ZN18 517 aaPredicted RBP30.49■■■□□ 2.47
LYST-204ENST00000462376 CHIC1Q5VXU3 224 aa29.28■■■□□ 2.28
LYST-204ENST00000462376 SENP3Q9H4L4 574 aaPredicted RBP25.9■■□□□ 1.74
LYST-204ENST00000462376 PHF23Q9BUL5 403 aaPredicted RBP25.75■■□□□ 1.71
LYST-204ENST00000462376 FOXD1Q16676 465 aa24.14■■□□□ 1.45
LYST-204ENST00000462376 PLPPR3Q6T4P5 718 aa23.6■■□□□ 1.37
LYST-204ENST00000462376 POTEDQ86YR6 584 aa23.03■■□□□ 1.28
LYST-204ENST00000462376 PPP6R1Q9UPN7 881 aa22.91■■□□□ 1.26
LYST-204ENST00000462376 ADRA2BP18089 450 aa22.9■■□□□ 1.26
LYST-204ENST00000462376 PIAS4Q8N2W9 510 aaPredicted RBP22.7■■□□□ 1.22
LYST-204ENST00000462376 MSH5O43196 834 aa22.39■■□□□ 1.17
LYST-204ENST00000462376 MAPK8IP2Q13387 824 aaPredicted RBP20.94■□□□□ 0.94
LYST-204ENST00000462376 SCAF1Q9H7N4 1312 aaKnown RBP20.87■□□□□ 0.93
LYST-204ENST00000462376 PPP4R3CPQ6ZMV5 832 aa20.78■□□□□ 0.92
LYST-204ENST00000462376 DMRT2Q9Y5R5 561 aa20.59■□□□□ 0.89
LYST-204ENST00000462376 CNKSR2Q8WXI2 1034 aa20.25■□□□□ 0.83
LYST-204ENST00000462376 NCBP3Q53F19 620 aaKnown RBP20.07■□□□□ 0.8
LYST-204ENST00000462376 DCAF8L1A6NGE4 600 aa19.95■□□□□ 0.78
LYST-204ENST00000462376 HOXD11P31277 338 aaPredicted RBP19.95■□□□□ 0.78
LYST-204ENST00000462376 RNF216Q9NWF9 866 aaPredicted RBP19.94■□□□□ 0.78
LYST-204ENST00000462376 KCNA4P22459 653 aa19.81■□□□□ 0.76
LYST-204ENST00000462376 NPM3O75607 178 aaKnown RBP19.8■□□□□ 0.76
LYST-204ENST00000462376 CACNB1Q02641 598 aaPredicted RBP19.65■□□□□ 0.74
LYST-204ENST00000462376 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.17■□□□□ 0.66
LYST-204ENST00000462376 RNF39Q9H2S5 420 aa19.14■□□□□ 0.65
LYST-204ENST00000462376 DNAJC5BQ9UF47 199 aa19.06■□□□□ 0.64
LYST-204ENST00000462376 C1QBPQ07021 282 aaKnown RBP18.87■□□□□ 0.61
LYST-204ENST00000462376 SLC4A2P04920 1241 aa18.79■□□□□ 0.6
LYST-204ENST00000462376 SLC4A1APQ9BWU0 796 aaKnown RBP18.78■□□□□ 0.6
LYST-204ENST00000462376 U3KPZ7 1027 aaPredicted RBP18.74■□□□□ 0.59
LYST-204ENST00000462376 SPINK5Q9NQ38 1064 aaPredicted RBP18.41■□□□□ 0.54
LYST-204ENST00000462376 CAPN15O75808 1086 aa18.4■□□□□ 0.54
LYST-204ENST00000462376 FOXD4L1Q9NU39 408 aa18.31■□□□□ 0.52
LYST-204ENST00000462376 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.3■□□□□ 0.52
LYST-204ENST00000462376 HNRNPUL2Q1KMD3 747 aaKnown RBP18.3■□□□□ 0.52
LYST-204ENST00000462376 MYCNP04198 464 aaPredicted RBP18.27■□□□□ 0.52
LYST-204ENST00000462376 SAMD1Q6SPF0 538 aaPredicted RBP18.23■□□□□ 0.51
LYST-204ENST00000462376 TRHP20396 242 aaPredicted RBP18.22■□□□□ 0.51
LYST-204ENST00000462376 ZBTB22O15209 634 aa18.2■□□□□ 0.5
LYST-204ENST00000462376 APLP2Q06481 763 aa18.2■□□□□ 0.5
LYST-204ENST00000462376 DSG3P32926 999 aa18.09■□□□□ 0.49
LYST-204ENST00000462376 ZNF219Q9P2Y4 722 aaPredicted RBP18.06■□□□□ 0.48
LYST-204ENST00000462376 ABCB7O75027 752 aa18.04■□□□□ 0.48
LYST-204ENST00000462376 POTEHQ6S545 545 aa17.95■□□□□ 0.46
LYST-204ENST00000462376 ATF5Q9Y2D1 282 aaPredicted RBP17.9■□□□□ 0.46
LYST-204ENST00000462376 EHMT2Q96KQ7 1210 aa17.85■□□□□ 0.45
LYST-204ENST00000462376 POLA2Q14181 598 aa17.77■□□□□ 0.44
LYST-204ENST00000462376 CSRNP3Q8WYN3 585 aa17.72■□□□□ 0.43
LYST-204ENST00000462376 ATXN8OSP0DMR3 200 aa17.62■□□□□ 0.41
LYST-204ENST00000462376 ZBTB12Q9Y330 459 aaPredicted RBP17.32■□□□□ 0.36
LYST-204ENST00000462376 RBM42Q9BTD8 480 aaKnown RBP17.22■□□□□ 0.35
LYST-204ENST00000462376 OSCARQ8IYS5 282 aa17.18■□□□□ 0.34
LYST-204ENST00000462376 FBLN2P98095 1184 aa17.14■□□□□ 0.33
LYST-204ENST00000462376 MKRN4PQ13434 485 aaPredicted RBP17.05■□□□□ 0.32
LYST-204ENST00000462376 AKT1S1Q96B36 256 aa16.91■□□□□ 0.3
LYST-204ENST00000462376 SPDYE2BA6NHP3 402 aa16.83■□□□□ 0.28
LYST-204ENST00000462376 SPDYE6P0CI01 402 aa16.83■□□□□ 0.28
LYST-204ENST00000462376 SPDYE2Q495Y8 402 aa16.83■□□□□ 0.28
LYST-204ENST00000462376 REM2Q8IYK8 340 aaPredicted RBP16.8■□□□□ 0.28
LYST-204ENST00000462376 ZNF692Q9BU19 519 aaPredicted RBP16.8■□□□□ 0.28
LYST-204ENST00000462376 CHRDL2Q6WN34 429 aa16.74■□□□□ 0.27
LYST-204ENST00000462376 PITPNM1O00562 1244 aa16.63■□□□□ 0.25
LYST-204ENST00000462376 SSUH2Q9Y2M2 353 aa16.63■□□□□ 0.25
LYST-204ENST00000462376 CLEC11AQ9Y240 323 aa16.58■□□□□ 0.24
LYST-204ENST00000462376 PABPN1Q86U42 306 aaKnown RBP eCLIP16.56■□□□□ 0.24
LYST-204ENST00000462376 SPDYE4A6NLX3 237 aa16.48■□□□□ 0.23
LYST-204ENST00000462376 SPDYE1Q8NFV5 336 aaPredicted RBP16.48■□□□□ 0.23
LYST-204ENST00000462376 SP7Q8TDD2 431 aaPredicted RBP16.44■□□□□ 0.22
LYST-204ENST00000462376 PIP4P2Q8N4L2 257 aa16.43■□□□□ 0.22
LYST-204ENST00000462376 FXR2P51116 673 aaKnown RBP eCLIP16.34■□□□□ 0.21
LYST-204ENST00000462376 PRR29P0C7W0 189 aa16.29■□□□□ 0.2
LYST-204ENST00000462376 PRKAR2AP13861 404 aaKnown RBP16.24■□□□□ 0.19
LYST-204ENST00000462376 CHADLQ6NUI6 762 aa16.2■□□□□ 0.18
LYST-204ENST00000462376 FKBP8Q14318 412 aa16.12■□□□□ 0.17
LYST-204ENST00000462376 HAX1O00165 279 aa16.11■□□□□ 0.17
LYST-204ENST00000462376 STAG3Q9UJ98 1225 aa16.11■□□□□ 0.17
LYST-204ENST00000462376 PROM2Q8N271 834 aa15.98■□□□□ 0.15
LYST-204ENST00000462376 CREBZFQ9NS37 354 aa15.91■□□□□ 0.14
LYST-204ENST00000462376 FARP1Q9Y4F1 1045 aaPredicted RBP15.91■□□□□ 0.14
LYST-204ENST00000462376 EVX2Q03828 476 aa15.9■□□□□ 0.14
LYST-204ENST00000462376 C19orf67A6NJJ6 358 aa15.81■□□□□ 0.12
LYST-204ENST00000462376 MIER1Q8N108 512 aa15.75■□□□□ 0.11
LYST-204ENST00000462376 CD44P16070 742 aaKnown RBP15.74■□□□□ 0.11
LYST-204ENST00000462376 PLCD3Q8N3E9 789 aa15.67■□□□□ 0.1
LYST-204ENST00000462376 PLEKHG5O94827 1062 aa15.65■□□□□ 0.1
LYST-204ENST00000462376 NPM1P06748 294 aaKnown RBP eCLIP15.65■□□□□ 0.1
LYST-204ENST00000462376 MNX1P50219 401 aaPredicted RBP15.65■□□□□ 0.1
LYST-204ENST00000462376 ZRANB1Q9UGI0 708 aa15.61■□□□□ 0.09
LYST-204ENST00000462376 FBXO3Q9UK99 471 aa15.58■□□□□ 0.08
LYST-204ENST00000462376 GABBR2O75899 941 aa15.54■□□□□ 0.08
LYST-204ENST00000462376 PAK3O75914 559 aaPredicted RBP15.53■□□□□ 0.08
LYST-204ENST00000462376 TSPYL2Q9H2G4 693 aaPredicted RBP15.48■□□□□ 0.07
LYST-204ENST00000462376 LHX8Q68G74 356 aa15.44■□□□□ 0.06
LYST-204ENST00000462376 ZNF579Q8NAF0 562 aaKnown RBP15.42■□□□□ 0.06
LYST-204ENST00000462376 PHF12Q96QT6 1004 aa15.42■□□□□ 0.06
LYST-204ENST00000462376 ZBTB47Q9UFB7 747 aaPredicted RBP15.41■□□□□ 0.06
LYST-204ENST00000462376 VASPP50552 380 aaPredicted RBP15.4■□□□□ 0.06
LYST-204ENST00000462376 RASEFQ8IZ41 740 aa15.37■□□□□ 0.05
LYST-204ENST00000462376 KLHL34Q8N239 644 aa15.36■□□□□ 0.05
LYST-204ENST00000462376 GALR2O43603 387 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms