RNA–Protein interactions for RNA: ENST00000462245.1

DENND1A-205, Transcript of DENN domain containing 1A, humanhuman

TSL 2

Gene DENND1A, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1A-205ENST00000462245 AEBP2Q6ZN18 517 aaPredicted RBP30.31■■■□□ 2.44
DENND1A-205ENST00000462245 CHIC1Q5VXU3 224 aa28.16■■■□□ 2.1
DENND1A-205ENST00000462245 SENP3Q9H4L4 574 aaPredicted RBP25.8■■□□□ 1.72
DENND1A-205ENST00000462245 PHF23Q9BUL5 403 aaPredicted RBP25.48■■□□□ 1.67
DENND1A-205ENST00000462245 FOXD1Q16676 465 aa24.24■■□□□ 1.47
DENND1A-205ENST00000462245 POTEDQ86YR6 584 aa23.48■■□□□ 1.35
DENND1A-205ENST00000462245 MSH5O43196 834 aa22.8■■□□□ 1.24
DENND1A-205ENST00000462245 PIAS4Q8N2W9 510 aaPredicted RBP22.44■■□□□ 1.18
DENND1A-205ENST00000462245 PPP6R1Q9UPN7 881 aa22.25■■□□□ 1.15
DENND1A-205ENST00000462245 ADRA2BP18089 450 aa22.11■■□□□ 1.13
DENND1A-205ENST00000462245 PLPPR3Q6T4P5 718 aa22.08■■□□□ 1.13
DENND1A-205ENST00000462245 MAPK8IP2Q13387 824 aaPredicted RBP20.55■□□□□ 0.88
DENND1A-205ENST00000462245 DMRT2Q9Y5R5 561 aa20.39■□□□□ 0.85
DENND1A-205ENST00000462245 SCAF1Q9H7N4 1312 aaKnown RBP20.05■□□□□ 0.8
DENND1A-205ENST00000462245 CACNB1Q02641 598 aaPredicted RBP20.04■□□□□ 0.8
DENND1A-205ENST00000462245 DCAF8L1A6NGE4 600 aa19.64■□□□□ 0.73
DENND1A-205ENST00000462245 RNF39Q9H2S5 420 aa19.46■□□□□ 0.71
DENND1A-205ENST00000462245 HOXD11P31277 338 aaPredicted RBP19.39■□□□□ 0.69
DENND1A-205ENST00000462245 PPP4R3CPQ6ZMV5 832 aa19.34■□□□□ 0.69
DENND1A-205ENST00000462245 C1QBPQ07021 282 aaKnown RBP19.09■□□□□ 0.65
DENND1A-205ENST00000462245 CNKSR2Q8WXI2 1034 aa19.07■□□□□ 0.64
DENND1A-205ENST00000462245 RNF216Q9NWF9 866 aaPredicted RBP19.05■□□□□ 0.64
DENND1A-205ENST00000462245 DNAJC5BQ9UF47 199 aa18.75■□□□□ 0.59
DENND1A-205ENST00000462245 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.48■□□□□ 0.553e-7■■□□□ 13.1
DENND1A-205ENST00000462245 NCBP3Q53F19 620 aaKnown RBP18.29■□□□□ 0.52
DENND1A-205ENST00000462245 POTEHQ6S545 545 aa18.25■□□□□ 0.51
DENND1A-205ENST00000462245 NPM3O75607 178 aaKnown RBP18.14■□□□□ 0.49
DENND1A-205ENST00000462245 U3KPZ7 1027 aaPredicted RBP18.05■□□□□ 0.48
DENND1A-205ENST00000462245 DSG3P32926 999 aa18.04■□□□□ 0.48
DENND1A-205ENST00000462245 SPINK5Q9NQ38 1064 aaPredicted RBP18.04■□□□□ 0.48
DENND1A-205ENST00000462245 CAPN15O75808 1086 aa17.97■□□□□ 0.47
DENND1A-205ENST00000462245 ABCB7O75027 752 aa17.55■□□□□ 0.4
DENND1A-205ENST00000462245 TRHP20396 242 aaPredicted RBP17.55■□□□□ 0.4
DENND1A-205ENST00000462245 SLC4A2P04920 1241 aa17.53■□□□□ 0.4
DENND1A-205ENST00000462245 ZNF219Q9P2Y4 722 aaPredicted RBP17.38■□□□□ 0.37
DENND1A-205ENST00000462245 APLP2Q06481 763 aa17.29■□□□□ 0.36
DENND1A-205ENST00000462245 KCNA4P22459 653 aa17.25■□□□□ 0.35
DENND1A-205ENST00000462245 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.16■□□□□ 0.34
DENND1A-205ENST00000462245 HNRNPUL2Q1KMD3 747 aaKnown RBP17.16■□□□□ 0.34
DENND1A-205ENST00000462245 RBM42Q9BTD8 480 aaKnown RBP17.09■□□□□ 0.33
DENND1A-205ENST00000462245 SAMD1Q6SPF0 538 aaPredicted RBP17.07■□□□□ 0.32
DENND1A-205ENST00000462245 CHRDL2Q6WN34 429 aa17.07■□□□□ 0.32
DENND1A-205ENST00000462245 POLA2Q14181 598 aa16.94■□□□□ 0.3
DENND1A-205ENST00000462245 SP7Q8TDD2 431 aaPredicted RBP16.78■□□□□ 0.28
DENND1A-205ENST00000462245 MYCNP04198 464 aaPredicted RBP16.71■□□□□ 0.27
DENND1A-205ENST00000462245 AKT1S1Q96B36 256 aa16.63■□□□□ 0.25
DENND1A-205ENST00000462245 PIP4P2Q8N4L2 257 aa16.57■□□□□ 0.24
DENND1A-205ENST00000462245 ATF5Q9Y2D1 282 aaPredicted RBP16.54■□□□□ 0.24
DENND1A-205ENST00000462245 REM2Q8IYK8 340 aaPredicted RBP16.53■□□□□ 0.24
DENND1A-205ENST00000462245 HAX1O00165 279 aa16.43■□□□□ 0.22
DENND1A-205ENST00000462245 OSCARQ8IYS5 282 aa16.4■□□□□ 0.22
DENND1A-205ENST00000462245 ZBTB12Q9Y330 459 aaPredicted RBP16.37■□□□□ 0.21
DENND1A-205ENST00000462245 PITPNM1O00562 1244 aa16.36■□□□□ 0.21
DENND1A-205ENST00000462245 FXR2P51116 673 aaKnown RBP eCLIP16.34■□□□□ 0.21
DENND1A-205ENST00000462245 EVX2Q03828 476 aa16.29■□□□□ 0.2
DENND1A-205ENST00000462245 FOXD4L1Q9NU39 408 aa16.21■□□□□ 0.19
DENND1A-205ENST00000462245 SLC4A1APQ9BWU0 796 aaKnown RBP16.09■□□□□ 0.17
DENND1A-205ENST00000462245 PRKAR2AP13861 404 aaKnown RBP15.93■□□□□ 0.14
DENND1A-205ENST00000462245 SPDYE2BA6NHP3 402 aa15.89■□□□□ 0.13
DENND1A-205ENST00000462245 SPDYE6P0CI01 402 aa15.89■□□□□ 0.13
DENND1A-205ENST00000462245 SPDYE2Q495Y8 402 aa15.89■□□□□ 0.13
DENND1A-205ENST00000462245 ZBTB22O15209 634 aa15.88■□□□□ 0.13
DENND1A-205ENST00000462245 CLEC11AQ9Y240 323 aa15.86■□□□□ 0.13
DENND1A-205ENST00000462245 C19orf67A6NJJ6 358 aa15.84■□□□□ 0.13
DENND1A-205ENST00000462245 GABBR2O75899 941 aa15.8■□□□□ 0.12
DENND1A-205ENST00000462245 SPDYE1Q8NFV5 336 aaPredicted RBP15.77■□□□□ 0.12
DENND1A-205ENST00000462245 FBLN2P98095 1184 aa15.76■□□□□ 0.11
DENND1A-205ENST00000462245 LHX8Q68G74 356 aa15.75■□□□□ 0.11
DENND1A-205ENST00000462245 ATXN8OSP0DMR3 200 aa15.73■□□□□ 0.11
DENND1A-205ENST00000462245 MKRN4PQ13434 485 aaPredicted RBP15.7■□□□□ 0.1
DENND1A-205ENST00000462245 CHADLQ6NUI6 762 aa15.68■□□□□ 0.1
DENND1A-205ENST00000462245 ZNF692Q9BU19 519 aaPredicted RBP15.65■□□□□ 0.1
DENND1A-205ENST00000462245 SSUH2Q9Y2M2 353 aa15.63■□□□□ 0.09
DENND1A-205ENST00000462245 POTEIP0CG38 1075 aa15.51■□□□□ 0.07
DENND1A-205ENST00000462245 PRR29P0C7W0 189 aa15.47■□□□□ 0.07
DENND1A-205ENST00000462245 PABPN1Q86U42 306 aaKnown RBP eCLIP15.42■□□□□ 0.06
DENND1A-205ENST00000462245 CD44P16070 742 aaKnown RBP15.36■□□□□ 0.05
DENND1A-205ENST00000462245 FARP1Q9Y4F1 1045 aaPredicted RBP15.31■□□□□ 0.04
DENND1A-205ENST00000462245 PLSCR2Q9NRY7 297 aa15.3■□□□□ 0.04
DENND1A-205ENST00000462245 DCBLD2Q96PD2 775 aa15.18■□□□□ 0.02
DENND1A-205ENST00000462245 CLCN6P51797 869 aa15.16■□□□□ 0.02
DENND1A-205ENST00000462245 ZRANB1Q9UGI0 708 aa15.07■□□□□ 0
DENND1A-205ENST00000462245 ZNF579Q8NAF0 562 aaKnown RBP15.06■□□□□ 0
DENND1A-205ENST00000462245 OTUD5Q96G74 571 aa15.03■□□□□ -0
DENND1A-205ENST00000462245 POTEB2H3BUK9 544 aa15.02■□□□□ -0
DENND1A-205ENST00000462245 GALR2O43603 387 aaPredicted RBP15.02■□□□□ -0
DENND1A-205ENST00000462245 CREBZFQ9NS37 354 aa14.98□□□□□ -0.01
DENND1A-205ENST00000462245 POTEMA6NI47 508 aa14.86□□□□□ -0.03
DENND1A-205ENST00000462245 PELP1Q8IZL8 1130 aaKnown RBP14.83□□□□□ -0.04
DENND1A-205ENST00000462245 PHF12Q96QT6 1004 aa14.83□□□□□ -0.04
DENND1A-205ENST00000462245 POTEGQ6S5H5 508 aa14.8□□□□□ -0.04
DENND1A-205ENST00000462245 STAG3Q9UJ98 1225 aa14.76□□□□□ -0.05
DENND1A-205ENST00000462245 PAK3O75914 559 aaPredicted RBP14.7□□□□□ -0.06
DENND1A-205ENST00000462245 POTEJP0CG39 1038 aa14.69□□□□□ -0.06
DENND1A-205ENST00000462245 MNX1P50219 401 aaPredicted RBP14.65□□□□□ -0.06
DENND1A-205ENST00000462245 METRNQ9UJH8 293 aa14.62□□□□□ -0.07
DENND1A-205ENST00000462245 ASTLQ6HA08 431 aaPredicted RBP14.6□□□□□ -0.07
DENND1A-205ENST00000462245 MS4A3Q96HJ5 214 aa14.6□□□□□ -0.07
DENND1A-205ENST00000462245 ATMINO43313 823 aaPredicted RBP14.59□□□□□ -0.07
DENND1A-205ENST00000462245 NPM1P06748 294 aaKnown RBP eCLIP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms