RNA–Protein interactions for RNA: ENST00000462243.2

TRIT1-204, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 5

Gene TRIT1, Length 550 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-204ENST00000462243 CHIC1Q5VXU3 224 aa13.62□□□□□ -0.23
TRIT1-204ENST00000462243 AEBP2Q6ZN18 517 aaPredicted RBP13.56□□□□□ -0.24
TRIT1-204ENST00000462243 PHF23Q9BUL5 403 aaPredicted RBP11.88□□□□□ -0.51
TRIT1-204ENST00000462243 SENP3Q9H4L4 574 aaPredicted RBP11.68□□□□□ -0.54
TRIT1-204ENST00000462243 PLPPR3Q6T4P5 718 aa11.24□□□□□ -0.61
TRIT1-204ENST00000462243 FOXD1Q16676 465 aa10.67□□□□□ -0.7
TRIT1-204ENST00000462243 ADRA2BP18089 450 aa10.41□□□□□ -0.74
TRIT1-204ENST00000462243 PPP6R1Q9UPN7 881 aa10.38□□□□□ -0.75
TRIT1-204ENST00000462243 PIAS4Q8N2W9 510 aaPredicted RBP10.17□□□□□ -0.78
TRIT1-204ENST00000462243 MSH5O43196 834 aa9.91□□□□□ -0.82
TRIT1-204ENST00000462243 PPP4R3CPQ6ZMV5 832 aa9.85□□□□□ -0.83
TRIT1-204ENST00000462243 KCNA4P22459 653 aa9.81□□□□□ -0.84
TRIT1-204ENST00000462243 NCBP3Q53F19 620 aaKnown RBP9.81□□□□□ -0.84
TRIT1-204ENST00000462243 SCAF1Q9H7N4 1312 aaKnown RBP9.79□□□□□ -0.84
TRIT1-204ENST00000462243 POTEDQ86YR6 584 aa9.62□□□□□ -0.87
TRIT1-204ENST00000462243 CNKSR2Q8WXI2 1034 aa9.6□□□□□ -0.87
TRIT1-204ENST00000462243 NPM3O75607 178 aaKnown RBP9.49□□□□□ -0.89
TRIT1-204ENST00000462243 SLC4A1APQ9BWU0 796 aaKnown RBP9.48□□□□□ -0.89
TRIT1-204ENST00000462243 EHMT2Q96KQ7 1210 aa9.38□□□□□ -0.91
TRIT1-204ENST00000462243 RNF216Q9NWF9 866 aaPredicted RBP9.36□□□□□ -0.91
TRIT1-204ENST00000462243 DNAJC5BQ9UF47 199 aa9.35□□□□□ -0.91
TRIT1-204ENST00000462243 MAPK8IP2Q13387 824 aaPredicted RBP9.33□□□□□ -0.92
TRIT1-204ENST00000462243 DMRT2Q9Y5R5 561 aa9.31□□□□□ -0.92
TRIT1-204ENST00000462243 HOXD11P31277 338 aaPredicted RBP9.23□□□□□ -0.93
TRIT1-204ENST00000462243 CSRNP3Q8WYN3 585 aa9.19□□□□□ -0.94
TRIT1-204ENST00000462243 FOXD4L1Q9NU39 408 aa9.08□□□□□ -0.96
TRIT1-204ENST00000462243 ZBTB22O15209 634 aa8.97□□□□□ -0.97
TRIT1-204ENST00000462243 MYCNP04198 464 aaPredicted RBP8.87□□□□□ -0.99
TRIT1-204ENST00000462243 SLC4A2P04920 1241 aa8.86□□□□□ -0.99
TRIT1-204ENST00000462243 DCAF8L1A6NGE4 600 aa8.85□□□□□ -0.99
TRIT1-204ENST00000462243 ATXN8OSP0DMR3 200 aa8.83□□□□□ -1
TRIT1-204ENST00000462243 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.81□□□□□ -1
TRIT1-204ENST00000462243 HNRNPUL2Q1KMD3 747 aaKnown RBP8.81□□□□□ -1
TRIT1-204ENST00000462243 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.79□□□□□ -1
TRIT1-204ENST00000462243 SAMD1Q6SPF0 538 aaPredicted RBP8.72□□□□□ -1.01
TRIT1-204ENST00000462243 APLP2Q06481 763 aa8.7□□□□□ -1.02
TRIT1-204ENST00000462243 U3KPZ7 1027 aaPredicted RBP8.6□□□□□ -1.03
TRIT1-204ENST00000462243 C1QBPQ07021 282 aaKnown RBP8.43□□□□□ -1.06
TRIT1-204ENST00000462243 RNF39Q9H2S5 420 aa8.42□□□□□ -1.06
TRIT1-204ENST00000462243 ZNF219Q9P2Y4 722 aaPredicted RBP8.42□□□□□ -1.06
TRIT1-204ENST00000462243 ATF5Q9Y2D1 282 aaPredicted RBP8.41□□□□□ -1.06
TRIT1-204ENST00000462243 CACNB1Q02641 598 aaPredicted RBP8.32□□□□□ -1.08
TRIT1-204ENST00000462243 FKBP8Q14318 412 aa8.32□□□□□ -1.08
TRIT1-204ENST00000462243 CAPN15O75808 1086 aa8.29□□□□□ -1.08
TRIT1-204ENST00000462243 TRHP20396 242 aaPredicted RBP8.28□□□□□ -1.08
TRIT1-204ENST00000462243 FBLN2P98095 1184 aa8.28□□□□□ -1.08
TRIT1-204ENST00000462243 ZBTB12Q9Y330 459 aaPredicted RBP8.27□□□□□ -1.09
TRIT1-204ENST00000462243 SPINK5Q9NQ38 1064 aaPredicted RBP8.24□□□□□ -1.09
TRIT1-204ENST00000462243 POLA2Q14181 598 aa8.21□□□□□ -1.1
TRIT1-204ENST00000462243 SPDYE4A6NLX3 237 aa8.14□□□□□ -1.11
TRIT1-204ENST00000462243 FBXO3Q9UK99 471 aa8.14□□□□□ -1.11
TRIT1-204ENST00000462243 AMER1Q5JTC6 1135 aaPredicted RBP8.12□□□□□ -1.11
TRIT1-204ENST00000462243 MKRN4PQ13434 485 aaPredicted RBP8.09□□□□□ -1.11
TRIT1-204ENST00000462243 DSG3P32926 999 aa8.08□□□□□ -1.12
TRIT1-204ENST00000462243 ABCB7O75027 752 aa8.07□□□□□ -1.12
TRIT1-204ENST00000462243 PROM2Q8N271 834 aa8.04□□□□□ -1.12
TRIT1-204ENST00000462243 SPDYE2BA6NHP3 402 aa8□□□□□ -1.13
TRIT1-204ENST00000462243 SPDYE6P0CI01 402 aa8□□□□□ -1.13
TRIT1-204ENST00000462243 SPDYE2Q495Y8 402 aa8□□□□□ -1.13
TRIT1-204ENST00000462243 ZNF692Q9BU19 519 aaPredicted RBP7.96□□□□□ -1.14
TRIT1-204ENST00000462243 RTN4Q9NQC3 1192 aaKnown RBP7.92□□□□□ -1.14
TRIT1-204ENST00000462243 STAG3Q9UJ98 1225 aa7.91□□□□□ -1.14
TRIT1-204ENST00000462243 SSUH2Q9Y2M2 353 aa7.9□□□□□ -1.14
TRIT1-204ENST00000462243 VASPP50552 380 aaPredicted RBP7.89□□□□□ -1.15
TRIT1-204ENST00000462243 OSCARQ8IYS5 282 aa7.89□□□□□ -1.15
TRIT1-204ENST00000462243 RBM42Q9BTD8 480 aaKnown RBP7.85□□□□□ -1.15
TRIT1-204ENST00000462243 PABPN1Q86U42 306 aaKnown RBP eCLIP7.81□□□□□ -1.16
TRIT1-204ENST00000462243 PLEKHG5O94827 1062 aa7.8□□□□□ -1.16
TRIT1-204ENST00000462243 ZBTB47Q9UFB7 747 aaPredicted RBP7.77□□□□□ -1.17
TRIT1-204ENST00000462243 IFNLR1Q8IU57 520 aaPredicted RBP7.74□□□□□ -1.17
TRIT1-204ENST00000462243 PLCD3Q8N3E9 789 aa7.74□□□□□ -1.17
TRIT1-204ENST00000462243 AKT1S1Q96B36 256 aa7.74□□□□□ -1.17
TRIT1-204ENST00000462243 KLHL34Q8N239 644 aa7.73□□□□□ -1.17
TRIT1-204ENST00000462243 MIER1Q8N108 512 aa7.71□□□□□ -1.18
TRIT1-204ENST00000462243 SPDYE1Q8NFV5 336 aaPredicted RBP7.71□□□□□ -1.18
TRIT1-204ENST00000462243 SPOCK2Q92563 424 aa7.71□□□□□ -1.18
TRIT1-204ENST00000462243 SLC24A1O60721 1099 aa7.64□□□□□ -1.19
TRIT1-204ENST00000462243 TRIM41Q8WV44 630 aa7.6□□□□□ -1.19
TRIT1-204ENST00000462243 PRR29P0C7W0 189 aa7.59□□□□□ -1.19
TRIT1-204ENST00000462243 REM2Q8IYK8 340 aaPredicted RBP7.59□□□□□ -1.19
TRIT1-204ENST00000462243 PKD2Q13563 968 aa7.57□□□□□ -1.2
TRIT1-204ENST00000462243 CLEC11AQ9Y240 323 aa7.56□□□□□ -1.2
TRIT1-204ENST00000462243 GSE1Q14687 1217 aa7.55□□□□□ -1.2
TRIT1-204ENST00000462243 ECM2O94769 699 aaPredicted RBP7.54□□□□□ -1.2
TRIT1-204ENST00000462243 DCAF8L2P0C7V8 631 aa7.52□□□□□ -1.21
TRIT1-204ENST00000462243 POTEHQ6S545 545 aa7.51□□□□□ -1.21
TRIT1-204ENST00000462243 NPM1P06748 294 aaKnown RBP eCLIP7.5□□□□□ -1.21
TRIT1-204ENST00000462243 TAOK2Q9UL54 1235 aa7.5□□□□□ -1.21
TRIT1-204ENST00000462243 CIZ1Q9ULV3 898 aaPredicted RBP7.5□□□□□ -1.21
TRIT1-204ENST00000462243 FAM212AQ96EL1 285 aa7.48□□□□□ -1.21
TRIT1-204ENST00000462243 PITPNM1O00562 1244 aa7.47□□□□□ -1.21
TRIT1-204ENST00000462243 CREBZFQ9NS37 354 aa7.47□□□□□ -1.21
TRIT1-204ENST00000462243 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.46□□□□□ -1.22
TRIT1-204ENST00000462243 NUBP1P53384 320 aa7.43□□□□□ -1.22
TRIT1-204ENST00000462243 PLCB2Q00722 1185 aa7.43□□□□□ -1.22
TRIT1-204ENST00000462243 DCAF8Q5TAQ9 597 aa7.42□□□□□ -1.22
TRIT1-204ENST00000462243 BBXQ8WY36 941 aaPredicted RBP7.42□□□□□ -1.22
TRIT1-204ENST00000462243 MNX1P50219 401 aaPredicted RBP7.41□□□□□ -1.22
TRIT1-204ENST00000462243 CHRM1P11229 460 aaPredicted RBP7.4□□□□□ -1.22
TRIT1-204ENST00000462243 RGL2O15211 777 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms