RNA–Protein interactions for RNA: ENST00000462197.1

KDM3A-207, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 448 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-207ENST00000462197 AEBP2Q6ZN18 517 aaPredicted RBP11.67□□□□□ -0.54
KDM3A-207ENST00000462197 CHIC1Q5VXU3 224 aa11.1□□□□□ -0.63
KDM3A-207ENST00000462197 POTEDQ86YR6 584 aa10.23□□□□□ -0.77
KDM3A-207ENST00000462197 SENP3Q9H4L4 574 aaPredicted RBP9.94□□□□□ -0.82
KDM3A-207ENST00000462197 PHF23Q9BUL5 403 aaPredicted RBP9.81□□□□□ -0.84
KDM3A-207ENST00000462197 FOXD1Q16676 465 aa9.27□□□□□ -0.93
KDM3A-207ENST00000462197 MSH5O43196 834 aa9.02□□□□□ -0.97
KDM3A-207ENST00000462197 PLPPR3Q6T4P5 718 aa8.88□□□□□ -0.99
KDM3A-207ENST00000462197 PIAS4Q8N2W9 510 aaPredicted RBP8.68□□□□□ -1.02
KDM3A-207ENST00000462197 PPP6R1Q9UPN7 881 aa8.68□□□□□ -1.02
KDM3A-207ENST00000462197 ADRA2BP18089 450 aa8.66□□□□□ -1.02
KDM3A-207ENST00000462197 CACNB1Q02641 598 aaPredicted RBP8.22□□□□□ -1.09
KDM3A-207ENST00000462197 MAPK8IP2Q13387 824 aaPredicted RBP7.94□□□□□ -1.14
KDM3A-207ENST00000462197 SCAF1Q9H7N4 1312 aaKnown RBP7.91□□□□□ -1.14
KDM3A-207ENST00000462197 DMRT2Q9Y5R5 561 aa7.89□□□□□ -1.15
KDM3A-207ENST00000462197 POTEHQ6S545 545 aa7.86□□□□□ -1.15
KDM3A-207ENST00000462197 PPP4R3CPQ6ZMV5 832 aa7.79□□□□□ -1.16
KDM3A-207ENST00000462197 CNKSR2Q8WXI2 1034 aa7.63□□□□□ -1.19
KDM3A-207ENST00000462197 HOXD11P31277 338 aaPredicted RBP7.6□□□□□ -1.19
KDM3A-207ENST00000462197 DCAF8L1A6NGE4 600 aa7.58□□□□□ -1.2
KDM3A-207ENST00000462197 RNF39Q9H2S5 420 aa7.57□□□□□ -1.2
KDM3A-207ENST00000462197 RNF216Q9NWF9 866 aaPredicted RBP7.56□□□□□ -1.2
KDM3A-207ENST00000462197 NCBP3Q53F19 620 aaKnown RBP7.49□□□□□ -1.21
KDM3A-207ENST00000462197 C1QBPQ07021 282 aaKnown RBP7.45□□□□□ -1.22
KDM3A-207ENST00000462197 NPM3O75607 178 aaKnown RBP7.39□□□□□ -1.23
KDM3A-207ENST00000462197 DNAJC5BQ9UF47 199 aa7.31□□□□□ -1.24
KDM3A-207ENST00000462197 KCNA4P22459 653 aa7.28□□□□□ -1.24
KDM3A-207ENST00000462197 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.25□□□□□ -1.253e-9■■■□□ 15.5
KDM3A-207ENST00000462197 U3KPZ7 1027 aaPredicted RBP7.12□□□□□ -1.27
KDM3A-207ENST00000462197 SLC4A2P04920 1241 aa7.05□□□□□ -1.28
KDM3A-207ENST00000462197 SPINK5Q9NQ38 1064 aaPredicted RBP7□□□□□ -1.29
KDM3A-207ENST00000462197 CAPN15O75808 1086 aa6.99□□□□□ -1.29
KDM3A-207ENST00000462197 SP7Q8TDD2 431 aaPredicted RBP6.96□□□□□ -1.3
KDM3A-207ENST00000462197 DSG3P32926 999 aa6.93□□□□□ -1.3
KDM3A-207ENST00000462197 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.9□□□□□ -1.3
KDM3A-207ENST00000462197 APLP2Q06481 763 aa6.9□□□□□ -1.3
KDM3A-207ENST00000462197 HNRNPUL2Q1KMD3 747 aaKnown RBP6.9□□□□□ -1.3
KDM3A-207ENST00000462197 TRHP20396 242 aaPredicted RBP6.88□□□□□ -1.31
KDM3A-207ENST00000462197 SLC4A1APQ9BWU0 796 aaKnown RBP6.88□□□□□ -1.31
KDM3A-207ENST00000462197 SAMD1Q6SPF0 538 aaPredicted RBP6.86□□□□□ -1.31
KDM3A-207ENST00000462197 ZNF219Q9P2Y4 722 aaPredicted RBP6.86□□□□□ -1.31
KDM3A-207ENST00000462197 ABCB7O75027 752 aa6.84□□□□□ -1.31
KDM3A-207ENST00000462197 MYCNP04198 464 aaPredicted RBP6.84□□□□□ -1.31
KDM3A-207ENST00000462197 PLSCR2Q9NRY7 297 aa6.8□□□□□ -1.32
KDM3A-207ENST00000462197 FOXD4L1Q9NU39 408 aa6.78□□□□□ -1.32
KDM3A-207ENST00000462197 CHRDL2Q6WN34 429 aa6.71□□□□□ -1.34
KDM3A-207ENST00000462197 ZBTB22O15209 634 aa6.7□□□□□ -1.34
KDM3A-207ENST00000462197 POLA2Q14181 598 aa6.69□□□□□ -1.34
KDM3A-207ENST00000462197 ATF5Q9Y2D1 282 aaPredicted RBP6.69□□□□□ -1.34
KDM3A-207ENST00000462197 RBM42Q9BTD8 480 aaKnown RBP6.61□□□□□ -1.35
KDM3A-207ENST00000462197 ZBTB12Q9Y330 459 aaPredicted RBP6.56□□□□□ -1.36
KDM3A-207ENST00000462197 ATXN8OSP0DMR3 200 aa6.55□□□□□ -1.36
KDM3A-207ENST00000462197 LHX8Q68G74 356 aa6.5□□□□□ -1.37
KDM3A-207ENST00000462197 OSCARQ8IYS5 282 aa6.5□□□□□ -1.37
KDM3A-207ENST00000462197 HAX1O00165 279 aa6.47□□□□□ -1.37
KDM3A-207ENST00000462197 AKT1S1Q96B36 256 aa6.46□□□□□ -1.38
KDM3A-207ENST00000462197 FBLN2P98095 1184 aa6.42□□□□□ -1.38
KDM3A-207ENST00000462197 REM2Q8IYK8 340 aaPredicted RBP6.41□□□□□ -1.38
KDM3A-207ENST00000462197 CSRNP3Q8WYN3 585 aa6.4□□□□□ -1.38
KDM3A-207ENST00000462197 MKRN4PQ13434 485 aaPredicted RBP6.38□□□□□ -1.39
KDM3A-207ENST00000462197 SPDYE2BA6NHP3 402 aa6.36□□□□□ -1.39
KDM3A-207ENST00000462197 SPDYE6P0CI01 402 aa6.36□□□□□ -1.39
KDM3A-207ENST00000462197 SPDYE2Q495Y8 402 aa6.36□□□□□ -1.39
KDM3A-207ENST00000462197 EHMT2Q96KQ7 1210 aa6.36□□□□□ -1.39
KDM3A-207ENST00000462197 PITPNM1O00562 1244 aa6.35□□□□□ -1.39
KDM3A-207ENST00000462197 PIP4P2Q8N4L2 257 aa6.35□□□□□ -1.39
KDM3A-207ENST00000462197 ZNF692Q9BU19 519 aaPredicted RBP6.29□□□□□ -1.4
KDM3A-207ENST00000462197 SSUH2Q9Y2M2 353 aa6.28□□□□□ -1.4
KDM3A-207ENST00000462197 FXR2P51116 673 aaKnown RBP eCLIP6.27□□□□□ -1.41
KDM3A-207ENST00000462197 EVX2Q03828 476 aa6.27□□□□□ -1.41
KDM3A-207ENST00000462197 SPDYE1Q8NFV5 336 aaPredicted RBP6.25□□□□□ -1.41
KDM3A-207ENST00000462197 CLEC11AQ9Y240 323 aa6.25□□□□□ -1.41
KDM3A-207ENST00000462197 PCDH10Q9P2E7 1040 aa6.22□□□□□ -1.41
KDM3A-207ENST00000462197 PABPN1Q86U42 306 aaKnown RBP eCLIP6.21□□□□□ -1.42
KDM3A-207ENST00000462197 PRKAR2AP13861 404 aaKnown RBP6.18□□□□□ -1.42
KDM3A-207ENST00000462197 POTEMA6NI47 508 aa6.16□□□□□ -1.42
KDM3A-207ENST00000462197 GABBR2O75899 941 aa6.13□□□□□ -1.43
KDM3A-207ENST00000462197 PRR29P0C7W0 189 aa6.13□□□□□ -1.43
KDM3A-207ENST00000462197 CHADLQ6NUI6 762 aa6.13□□□□□ -1.43
KDM3A-207ENST00000462197 POTEGQ6S5H5 508 aa6.11□□□□□ -1.43
KDM3A-207ENST00000462197 C19orf67A6NJJ6 358 aa6.08□□□□□ -1.44
KDM3A-207ENST00000462197 SPDYE4A6NLX3 237 aa6.08□□□□□ -1.44
KDM3A-207ENST00000462197 STAG3Q9UJ98 1225 aa6.02□□□□□ -1.45
KDM3A-207ENST00000462197 FARP1Q9Y4F1 1045 aaPredicted RBP6.02□□□□□ -1.45
KDM3A-207ENST00000462197 CD44P16070 742 aaKnown RBP5.99□□□□□ -1.45
KDM3A-207ENST00000462197 CREBZFQ9NS37 354 aa5.99□□□□□ -1.45
KDM3A-207ENST00000462197 POTEIP0CG38 1075 aa5.97□□□□□ -1.45
KDM3A-207ENST00000462197 PROM2Q8N271 834 aa5.94□□□□□ -1.46
KDM3A-207ENST00000462197 OTUD5Q96G74 571 aa5.93□□□□□ -1.46
KDM3A-207ENST00000462197 ZRANB1Q9UGI0 708 aa5.91□□□□□ -1.46
KDM3A-207ENST00000462197 ZNF579Q8NAF0 562 aaKnown RBP5.9□□□□□ -1.46
KDM3A-207ENST00000462197 MNX1P50219 401 aaPredicted RBP5.89□□□□□ -1.47
KDM3A-207ENST00000462197 NPM1P06748 294 aaKnown RBP eCLIP5.88□□□□□ -1.47
KDM3A-207ENST00000462197 PAK3O75914 559 aaPredicted RBP5.87□□□□□ -1.47
KDM3A-207ENST00000462197 CLCN6P51797 869 aa5.87□□□□□ -1.47
KDM3A-207ENST00000462197 PHF12Q96QT6 1004 aa5.84□□□□□ -1.47
KDM3A-207ENST00000462197 GALR2O43603 387 aaPredicted RBP5.83□□□□□ -1.48
KDM3A-207ENST00000462197 DCBLD2Q96PD2 775 aa5.83□□□□□ -1.48
KDM3A-207ENST00000462197 FKBP8Q14318 412 aa5.82□□□□□ -1.48
KDM3A-207ENST00000462197 PLEKHG5O94827 1062 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms