RNA–Protein interactions for RNA: ENST00000462192.1

USP33-206, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 3

Gene USP33, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-206ENST00000462192 AEBP2Q6ZN18 517 aaPredicted RBP28.29■■■□□ 2.12
USP33-206ENST00000462192 CHIC1Q5VXU3 224 aa26.88■■□□□ 1.89
USP33-206ENST00000462192 SENP3Q9H4L4 574 aaPredicted RBP24.42■■□□□ 1.5
USP33-206ENST00000462192 PHF23Q9BUL5 403 aaPredicted RBP23.96■■□□□ 1.43
USP33-206ENST00000462192 FOXD1Q16676 465 aa22.6■■□□□ 1.21
USP33-206ENST00000462192 PLPPR3Q6T4P5 718 aa21.5■■□□□ 1.03
USP33-206ENST00000462192 MSH5O43196 834 aa21.43■■□□□ 1.02
USP33-206ENST00000462192 PIAS4Q8N2W9 510 aaPredicted RBP21.15■□□□□ 0.98
USP33-206ENST00000462192 POTEDQ86YR6 584 aa20.98■□□□□ 0.95
USP33-206ENST00000462192 PPP6R1Q9UPN7 881 aa20.93■□□□□ 0.94
USP33-206ENST00000462192 ADRA2BP18089 450 aa20.88■□□□□ 0.93
USP33-206ENST00000462192 SCAF1Q9H7N4 1312 aaKnown RBP19.43■□□□□ 0.7
USP33-206ENST00000462192 DMRT2Q9Y5R5 561 aa19.28■□□□□ 0.68
USP33-206ENST00000462192 MAPK8IP2Q13387 824 aaPredicted RBP19.18■□□□□ 0.66
USP33-206ENST00000462192 PPP4R3CPQ6ZMV5 832 aa18.73■□□□□ 0.59
USP33-206ENST00000462192 HOXD11P31277 338 aaPredicted RBP18.53■□□□□ 0.56
USP33-206ENST00000462192 CNKSR2Q8WXI2 1034 aa18.51■□□□□ 0.55
USP33-206ENST00000462192 DCAF8L1A6NGE4 600 aa18.44■□□□□ 0.54
USP33-206ENST00000462192 CACNB1Q02641 598 aaPredicted RBP18.39■□□□□ 0.53
USP33-206ENST00000462192 RNF216Q9NWF9 866 aaPredicted RBP18.38■□□□□ 0.53
USP33-206ENST00000462192 RNF39Q9H2S5 420 aa18.16■□□□□ 0.5
USP33-206ENST00000462192 NCBP3Q53F19 620 aaKnown RBP18.14■□□□□ 0.49
USP33-206ENST00000462192 DNAJC5BQ9UF47 199 aa18.1■□□□□ 0.49
USP33-206ENST00000462192 C1QBPQ07021 282 aaKnown RBP18■□□□□ 0.47
USP33-206ENST00000462192 NPM3O75607 178 aaKnown RBP17.66■□□□□ 0.42
USP33-206ENST00000462192 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.66■□□□□ 0.42
USP33-206ENST00000462192 U3KPZ7 1027 aaPredicted RBP17.17■□□□□ 0.34
USP33-206ENST00000462192 KCNA4P22459 653 aa17.13■□□□□ 0.33
USP33-206ENST00000462192 APLP2Q06481 763 aa17.01■□□□□ 0.31
USP33-206ENST00000462192 CAPN15O75808 1086 aa17■□□□□ 0.31
USP33-206ENST00000462192 DSG3P32926 999 aa16.92■□□□□ 0.3
USP33-206ENST00000462192 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.91■□□□□ 0.3
USP33-206ENST00000462192 HNRNPUL2Q1KMD3 747 aaKnown RBP16.91■□□□□ 0.3
USP33-206ENST00000462192 SPINK5Q9NQ38 1064 aaPredicted RBP16.91■□□□□ 0.3
USP33-206ENST00000462192 SLC4A2P04920 1241 aa16.86■□□□□ 0.29
USP33-206ENST00000462192 ZNF219Q9P2Y4 722 aaPredicted RBP16.78■□□□□ 0.28
USP33-206ENST00000462192 SAMD1Q6SPF0 538 aaPredicted RBP16.73■□□□□ 0.27
USP33-206ENST00000462192 TRHP20396 242 aaPredicted RBP16.66■□□□□ 0.26
USP33-206ENST00000462192 ABCB7O75027 752 aa16.48■□□□□ 0.23
USP33-206ENST00000462192 POTEHQ6S545 545 aa16.47■□□□□ 0.23
USP33-206ENST00000462192 MYCNP04198 464 aaPredicted RBP16.46■□□□□ 0.23
USP33-206ENST00000462192 RBM42Q9BTD8 480 aaKnown RBP16.34■□□□□ 0.21
USP33-206ENST00000462192 SLC4A1APQ9BWU0 796 aaKnown RBP16.24■□□□□ 0.19
USP33-206ENST00000462192 POLA2Q14181 598 aa16.2■□□□□ 0.18
USP33-206ENST00000462192 FOXD4L1Q9NU39 408 aa16.18■□□□□ 0.18
USP33-206ENST00000462192 ZBTB12Q9Y330 459 aaPredicted RBP16.07■□□□□ 0.16
USP33-206ENST00000462192 CHRDL2Q6WN34 429 aa15.9■□□□□ 0.14
USP33-206ENST00000462192 AKT1S1Q96B36 256 aa15.87■□□□□ 0.13
USP33-206ENST00000462192 EHMT2Q96KQ7 1210 aa15.86■□□□□ 0.13
USP33-206ENST00000462192 ATF5Q9Y2D1 282 aaPredicted RBP15.85■□□□□ 0.13
USP33-206ENST00000462192 ATXN8OSP0DMR3 200 aa15.81■□□□□ 0.12
USP33-206ENST00000462192 ZBTB22O15209 634 aa15.65■□□□□ 0.1
USP33-206ENST00000462192 OSCARQ8IYS5 282 aa15.63■□□□□ 0.09
USP33-206ENST00000462192 REM2Q8IYK8 340 aaPredicted RBP15.62■□□□□ 0.09
USP33-206ENST00000462192 CSRNP3Q8WYN3 585 aa15.61■□□□□ 0.09
USP33-206ENST00000462192 FBLN2P98095 1184 aa15.54■□□□□ 0.08
USP33-206ENST00000462192 SPDYE2BA6NHP3 402 aa15.47■□□□□ 0.07
USP33-206ENST00000462192 SPDYE6P0CI01 402 aa15.47■□□□□ 0.07
USP33-206ENST00000462192 SPDYE2Q495Y8 402 aa15.47■□□□□ 0.07
USP33-206ENST00000462192 PIP4P2Q8N4L2 257 aa15.44■□□□□ 0.06
USP33-206ENST00000462192 PITPNM1O00562 1244 aa15.41■□□□□ 0.06
USP33-206ENST00000462192 SP7Q8TDD2 431 aaPredicted RBP15.39■□□□□ 0.05
USP33-206ENST00000462192 FXR2P51116 673 aaKnown RBP eCLIP15.38■□□□□ 0.05
USP33-206ENST00000462192 HAX1O00165 279 aa15.25■□□□□ 0.03
USP33-206ENST00000462192 SPDYE1Q8NFV5 336 aaPredicted RBP15.25■□□□□ 0.03
USP33-206ENST00000462192 ZNF692Q9BU19 519 aaPredicted RBP15.2■□□□□ 0.02
USP33-206ENST00000462192 SSUH2Q9Y2M2 353 aa15.17■□□□□ 0.02
USP33-206ENST00000462192 MKRN4PQ13434 485 aaPredicted RBP15.16■□□□□ 0.02
USP33-206ENST00000462192 CLEC11AQ9Y240 323 aa15.11■□□□□ 0.01
USP33-206ENST00000462192 PRKAR2AP13861 404 aaKnown RBP15.05■□□□□ -0
USP33-206ENST00000462192 PABPN1Q86U42 306 aaKnown RBP eCLIP14.92□□□□□ -0.02
USP33-206ENST00000462192 PRR29P0C7W0 189 aa14.91□□□□□ -0.02
USP33-206ENST00000462192 C19orf67A6NJJ6 358 aa14.88□□□□□ -0.03
USP33-206ENST00000462192 EVX2Q03828 476 aa14.86□□□□□ -0.03
USP33-206ENST00000462192 CHADLQ6NUI6 762 aa14.73□□□□□ -0.05
USP33-206ENST00000462192 CLCN6P51797 869 aa14.7□□□□□ -0.06
USP33-206ENST00000462192 STAG3Q9UJ98 1225 aa14.68□□□□□ -0.06
USP33-206ENST00000462192 GABBR2O75899 941 aa14.67□□□□□ -0.06
USP33-206ENST00000462192 FARP1Q9Y4F1 1045 aaPredicted RBP14.63□□□□□ -0.07
USP33-206ENST00000462192 CD44P16070 742 aaKnown RBP14.58□□□□□ -0.08
USP33-206ENST00000462192 SPDYE4A6NLX3 237 aa14.5□□□□□ -0.09
USP33-206ENST00000462192 LHX8Q68G74 356 aa14.43□□□□□ -0.1
USP33-206ENST00000462192 CREBZFQ9NS37 354 aa14.4□□□□□ -0.1
USP33-206ENST00000462192 ZNF579Q8NAF0 562 aaKnown RBP14.38□□□□□ -0.11
USP33-206ENST00000462192 PAK3O75914 559 aaPredicted RBP14.35□□□□□ -0.11
USP33-206ENST00000462192 ZRANB1Q9UGI0 708 aa14.34□□□□□ -0.11
USP33-206ENST00000462192 NPM1P06748 294 aaKnown RBP eCLIP14.33□□□□□ -0.12
USP33-206ENST00000462192 DCBLD2Q96PD2 775 aa14.33□□□□□ -0.12
USP33-206ENST00000462192 POTEIP0CG38 1075 aa14.25□□□□□ -0.13
USP33-206ENST00000462192 MNX1P50219 401 aaPredicted RBP14.12□□□□□ -0.15
USP33-206ENST00000462192 PROM2Q8N271 834 aa14.12□□□□□ -0.15
USP33-206ENST00000462192 GALR2O43603 387 aaPredicted RBP14.1□□□□□ -0.15
USP33-206ENST00000462192 FKBP8Q14318 412 aa14.08□□□□□ -0.16
USP33-206ENST00000462192 PLEKHG5O94827 1062 aa14.06□□□□□ -0.16
USP33-206ENST00000462192 PHF12Q96QT6 1004 aa14.03□□□□□ -0.16
USP33-206ENST00000462192 ASTLQ6HA08 431 aaPredicted RBP13.9□□□□□ -0.18
USP33-206ENST00000462192 C7P10643 843 aa13.88□□□□□ -0.19
USP33-206ENST00000462192 SLC39A7Q92504 469 aa13.88□□□□□ -0.19
USP33-206ENST00000462192 MIER1Q8N108 512 aa13.87□□□□□ -0.19
USP33-206ENST00000462192 MS4A3Q96HJ5 214 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms